mRNA_P-fluviatile_contig13.1948.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1948.1
Unique NamemRNA_P-fluviatile_contig13.1948.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A6H5KI73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI73_9PHAE)

HSP 1 Score: 684 bits (1765), Expect = 1.330e-238
Identity = 350/426 (82.16%), Postives = 375/426 (88.03%), Query Frame = 1
Query:    1 LACIALSFTPVRSFVPQPTVG-ISARLP---RRARG------LLPSSSLSQKQHATAAIAAGAAE-QSQGLALRMVAAPEFSTTKAPGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            LAC  LSF     FV  PT   +SAR P    RA G               ++H    + AGA + +++G ALRMVAAPE S T APGTA++DWENLGFEYRDVNSHVKFTFKNGAWDEGE+VKDPYV VHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFI+ACKMAVKAN+E+VPPYGS+GALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVV+EDYDRAAPKGVGAVKVAGNYAAD++PN+LAK+AGYPI LYLDAKTNTLVEEFSTSNFFAVT DNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVE+RPV F EV+SFKEVAACGTAVVMTTIKQIVKG EI+SINGGSDETGPVCQALY+RVRGVQAGELEDKFGWM+ V
Sbjct:    9 LACAVLSFARATGFVSGPTAASVSARAPWAGARAHGGAXXXXXXXXXXXXDRRH----VRAGAGDSEARGKALRMVAAPEMSRTNAPGTAEMDWENLGFEYRDVNSHVKFTFKNGAWDEGEMVKDPYVNVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIKACKMAVKANMEYVPPYGSEGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVIEDYDRAAPKGVGAVKVAGNYAADMMPNMLAKQAGYPIGLYLDAKTNTLVEEFSTSNFFAVTEDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVEHRPVPFDEVSSFKEVAACGTAVVMTTIKQIVKGGEIISINGGSDETGPVCQALYDRVRGVQAGELEDKFGWMMPV 430          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: K8Z6W3_NANGC (Branched-chain amino acid aminotransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W3_NANGC)

HSP 1 Score: 473 bits (1218), Expect = 1.760e-157
Identity = 222/342 (64.91%), Postives = 267/342 (78.07%), Query Frame = 1
Query:  220 KAPGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            +APGTA+LDW NLGFE+R   SH+KF +KNG W EGELV DPYVKVHIANT LHYGQ++FEGLKAF  +DGS+++FRP ENAKR+R SAER+LM   P D F+ A +  V  N ++VPP+G+ G+LY+RPLLFG+G RIGL PSDEYTLL+M IPVG+YYKGG  P +A+V++DYDRAAP+GVG VKVAGNYAADLLPN+L K+ GYPI LYLDAKTN+ VEEFSTSNF A+     FVTP SP VLPSITNKSLM LA DEG+ V+ R +  TEV + +EVAACGTAVV+T + ++V   E++ I G    TGPV   LY RVR +Q GE EDKF W V V
Sbjct:    4 RAPGTANLDWANLGFEFRQTRSHIKFVWKNGEWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSIRIFRPQENAKRLRMSAERLLMTAFPEDNFVEAVRRVVADNADYVPPFGTGGSLYIRPLLFGSGPRIGLNPSDEYTLLIMPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNLLGKKKGYPIGLYLDAKTNSFVEEFSTSNFVAIDSSGAFVTPRSPTVLPSITNKSLMDLARDEGLAVQERAIPITEVKTLREVAACGTAVVVTPVNRVVYRDEVIKIGGEDGGTGPVTAKLYSRVRAIQQGEAEDKFSWTVKV 345          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A6V1P2K0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2K0_HETAK)

HSP 1 Score: 457 bits (1176), Expect = 1.420e-150
Identity = 216/341 (63.34%), Postives = 264/341 (77.42%), Query Frame = 1
Query:  223 APGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            A G  +LDW NLGFE+R   SH+K  +K+GAW   ELV +PY+K HIA TALHYGQ+VFEGLKA    DGSVK+FR DENAKRI  SA RILM   P + F+  CK  V+ N++FVPPYG+ G+LYLRPLLFG+G R+GLQP+DEYTLLVM +PV +YY GG +P TAVV++DYDRAAP+GVG  KVAGNYAAD+LPN++AK+AG+PI LYLDAKTN  VEEFSTSNF  VT D ++ TPDSP +L SITNKSLM++AEDEG+VV+  P+   +VA F EVAACGTAVV+T I ++V   +++ ING S + GPV Q LY R+R +Q GE EDKFGW   V
Sbjct:   45 AAGAQNLDWVNLGFEFRQTRSHIKVVYKDGAWGPSELVGEPYIKTHIAATALHYGQAVFEGLKAMTHPDGSVKIFRADENAKRINRSAARILMPEFPEERFVELCKEVVRDNLDFVPPYGTGGSLYLRPLLFGSGPRVGLQPADEYTLLVMVMPVADYYPGGPQPITAVVIDDYDRAAPRGVGECKVAGNYAADMLPNIMAKKAGFPIGLYLDAKTNRFVEEFSTSNFLGVTADGRYRTPDSPTILKSITNKSLMRIAEDEGLVVDRTPIPIEDVAGFAEVAACGTAVVLTPINKVVYQDKVMEINGASKDIGPVTQKLYNRMRAIQYGEEEDKFGWTFQV 385          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A1Z5JJ00_FISSO (Branched-chain amino acid aminotransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ00_FISSO)

HSP 1 Score: 424 bits (1091), Expect = 8.750e-138
Identity = 210/350 (60.00%), Postives = 262/350 (74.86%), Query Frame = 1
Query:  217 TKAPGTADLD--WENLGFEYRDVNSHVKFTFKNG-AWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGF-KPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTH-DNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVK--GSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            TK PGTA LD  W  LGFE+R  NSHV+ T+K G  W + E+VK+PY+++HI  TALHYGQ+ FEGLKAF  +DG+V +FRPDENAKR++AS +RI M   P DLFI A K  V  NIE+VPPYGS GALY+RP+LFG+G RIGLQP+DEYT + + IPVG+YYKGG   P   +++ D+DRAAP+GVGA KVAGNYAADLLPN+L+K+ G+PI LYLDAKT T +EEFSTSNF  + H  N +VTP SP+VLPSITNK+LMQLAE+EGM VE R +   E+  F EV A GTAVV+T +  I +  G +I     G  E GPV + LY++VR +Q GE+EDK+GW V +
Sbjct:   42 TKKPGTAKLDVPWGELGFEFRPTNSHVRVTYKEGEGWGKPEMVKEPYIQLHIGATALHYGQACFEGLKAFCHEDGTVNIFRPDENAKRMQASCDRIRMAKMPTDLFIDAVKAVVNDNIEYVPPYGSGGALYIRPILFGSGPRIGLQPADEYTFVCLVIPVGDYYKGGLASPVKGLLITDFDRAAPRGVGAAKVAGNYAADLLPNMLSKKQGFPIGLYLDAKTQTKIEEFSTSNFVGIKHATNSYVTPKSPSVLPSITNKALMQLAEEEGMKVEQRDIDIEELDEFDEVLAVGTAVVVTPVGSITRLDGDDIKQYKFGEGEIGPVTRKLYDKVRAIQNGEVEDKYGWNVKL 391          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A7X7KWI3_9BACT (Branched-chain-amino-acid transaminase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X7KWI3_9BACT)

HSP 1 Score: 422 bits (1085), Expect = 1.130e-137
Identity = 190/335 (56.72%), Postives = 254/335 (75.82%), Query Frame = 1
Query:  241 LDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            +DW +LGF+Y D NSH+++T++ GAWD GELV++PY+K+HIA + LHYGQ+ FEGLK F  +DG V+ FRP ENA+R+  +A R+ M P P +LF+ A +  V+AN  F+PPYG+ G+LY+RPLL G+G +IG+ P+DEYT +++ +PVG YYKGG KP  A +++DYDRAAP GVG VKVAGNYAA L  +  AK  GYP+ LYLDA+T+T VEEF+TSNFFA+T D K+VTPDSP++LPS+TN +L Q+A D GM VE RPV F E+ +F E+ ACGTAVV+T + +IV+G  ++ +  GSD  GPV Q LY  V+G+Q G+L D  GW V V
Sbjct:    4 IDWTSLGFKYLDTNSHIRYTWRKGAWDAGELVREPYLKLHIAASCLHYGQAAFEGLKVFGCRDGRVRAFRPAENAERMYRTARRVCMAPVPVELFLEALRRVVQANRAFIPPYGTGGSLYVRPLLIGSGPQIGVAPADEYTFIILVMPVGPYYKGGLKPVRAAILDDYDRAAPLGVGHVKVAGNYAASLFAHEQAKHDGYPVELYLDARTHTYVEEFATSNFFAITRDGKYVTPDSPSILPSVTNDTLKQVAADLGMPVETRPVAFGELGTFAEIGACGTAVVVTPVNEIVRGDTVIRVGDGSDTCGPVLQKLYNTVQGIQYGDLPDTHGWCVDV 338          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A7S2GLR1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLR1_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 1.410e-136
Identity = 209/339 (61.65%), Postives = 258/339 (76.11%), Query Frame = 1
Query:  229 GTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVK-DPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGG-FKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMV 1239
            G+AD+DWENLGFE+R   S++++ +++G WDEGELV  +P + VH+A TALHYGQSVFEGLKAF  +DGSV++FRPDENAKR+  SA+R +M   P D F+ A +  V+ N+++VPP  S+GALY+RPLLFG+G RIGL PSDEYTL+ +A+PVG+YY GG   P    VVE YDRAAP GVG VKVAGNYAADL PN   K+ G+PI LYLDA+TNTLVEEFSTSNFF +T D  +VTP+SPAVLPSITNK LM LA+DEG  V+ RP+  TE+ SFKEVAACGTAVV+T I+ I  G +        D+TGPV Q LY+R+R +Q GE  D  GW V
Sbjct:   65 GSADMDWENLGFEFRQTRSYLRYVWRDGEWDEGELVAGEPTMNVHVACTALHYGQSVFEGLKAFAWEDGSVRVFRPDENAKRMARSADRTMMPSLPVDDFVAATQRLVRDNLDYVPPPSSKGALYIRPLLFGSGPRIGLSPSDEYTLIFLAMPVGDYYAGGKLTPVKGRVVEGYDRAAPNGVGDVKVAGNYAADLKPNQQMKKDGFPIGLYLDARTNTLVEEFSTSNFFGITEDGTYVTPESPAVLPSITNKCLMDLAKDEGREVQRRPIPVTELDSFKEVAACGTAVVITPIRSIQHGEKEYFFG---DKTGPVTQHLYQRLRAMQTGEEADTLGWSV 400          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A7S2PL05_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PL05_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 2.130e-136
Identity = 205/357 (57.42%), Postives = 261/357 (73.11%), Query Frame = 1
Query:  187 RMVAAPEFSTTKAPGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFK-PTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNK-FVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVK--GSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            R+  A + +   APGTADL W  LGFE+R   SH++ T+++G W E E+V+ PY+ VHI  TALHYGQ+ FEGLKAF  +DGSV LFRPDENAKRI  S  R++M   P + FI+AC   VK N+ +VPPYGS GALYLRPLLFG+G RIGLQP++EYT +VM IPVG+YYKGG   P   ++V+DYDRAAPKGVGA KVAGNYAADL+PN+ AK+ G+PI LYLDA T+TLVEEFSTSNF  + ++NK ++TP S +VLPSITNKSL  LA+DEGM VE R ++  E+++F EV ACGTAVV+T I  + +  G+   S    +++ G   + LY+ VR +Q GE+ED   W   V
Sbjct:   47 RLSVATDINAVGAPGTADLPWSELGFEFRPTKSHLRMTYRDGKWQEPEMVESPYINVHIGATALHYGQACFEGLKAFAHEDGSVNLFRPDENAKRINRSGHRVMMPEIPVETFIKACNDVVKDNVAYVPPYGSGGALYLRPLLFGSGPRIGLQPAEEYTFIVMVIPVGDYYKGGLAAPVNGLIVDDYDRAAPKGVGAAKVAGNYAADLIPNMAAKKKGFPICLYLDAATHTLVEEFSTSNFIGIDNENKKYITPKSDSVLPSITNKSLQTLAKDEGMTVEQRDIEVAELSTFDEVIACGTAVVVTPIGSLTRFDGNGEESKYQFTEDVGETTRRLYDTVRNIQNGEIEDTHNWNYKV 403          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A0G4F3S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3S3_VITBC)

HSP 1 Score: 417 bits (1072), Expect = 9.920e-135
Identity = 202/343 (58.89%), Postives = 260/343 (75.80%), Query Frame = 1
Query:  229 GTADLDWENLGFEYRDVNSHV--KFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHD-NKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDE-TGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            GTA+LDWE L FEY   + +   ++T + G WD+G + ++PY+ +H+  TALHYGQ+ FEGLKAFH KDG V++FRP +NA+R++ SAER++M P P ++FI AC+ AV AN+ +VPPYG+ G+LYLRP+L G+  RIG+QP++EYT  VM IPVG+YYKGG +P +A VVE YDRAAP+GVGA KVAGNYAADLLPN + K  G+PIALYLDAK N  ++EFSTSNF AVT D N +VTP+SP++LPSITN SLM+LA+DEG+  + RPV   EV SF EVAACGTAV++T I +IV   +   + G      GPV + LY RVRG+Q GE  DKFGWMV +
Sbjct:   62 GTANLDWEALRFEYLPTDGYCVYRYTAEKG-WDDGRMEQEPYISLHVGATALHYGQAAFEGLKAFHCKDGKVRMFRPLDNARRLQRSAERLMMPPVPENIFIYACRQAVLANLAYVPPYGTGGSLYLRPVLIGSSPRIGVQPAEEYTFFVMVIPVGDYYKGGLQPVSAWVVEGYDRAAPQGVGAYKVAGNYAADLLPNSIGKSKGFPIALYLDAKENRYIDEFSTSNFIAVTQDGNTYVTPESPSILPSITNLSLMELAKDEGLDTQRRPVPIEEVGSFSEVAACGTAVIITPIDRIVHKDKTYVVRGPDGRPVGPVFERLYRRVRGIQYGEEADKFGWMVPL 403          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: B8BY53_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY53_THAPS)

HSP 1 Score: 416 bits (1070), Expect = 2.040e-134
Identity = 204/347 (58.79%), Postives = 255/347 (73.49%), Query Frame = 1
Query:  223 APGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGF-KPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNK-FVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVK----GSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            APGTADL W  LGFE+R   SH++  +K+G W E ELV+ PY+ VHI  TALHYGQ+ FEGLKAF   DGSV +FRPDENAKRI AS+ R++M   P + FI+AC   VK NI +VPPYGS GALYLRPLLFG+G RIGLQP++EYT +V+ IPVG+YYKGG  KP   ++V+DYDRAAPKGVGA KVAGNYAADL+PN+ AK+ G+PI LYLDA T++ +EEFSTSNF  + +DNK +VTP SP+VLPSITNKSL  +A+DEGM VE R +  +E++ F EV ACGTAVV+T +  + +    G E       S++ G   + LY+ VR +Q GE+ED   W   V
Sbjct:   61 APGTADLPWSELGFEFRPTKSHLRMIYKDGKWGEAELVESPYINVHIGATALHYGQACFEGLKAFAHDDGSVYMFRPDENAKRINASSGRVMMPEIPVETFIKACNDVVKDNIAYVPPYGSGGALYLRPLLFGSGPRIGLQPAEEYTFIVLVIPVGDYYKGGLAKPVNGLIVDDYDRAAPKGVGAAKVAGNYAADLVPNMEAKKKGFPICLYLDAATHSKIEEFSTSNFIGIDNDNKKYVTPRSPSVLPSITNKSLQTIAKDEGMTVEQREISISELSEFDEVVACGTAVVVTPVGSLTRFDASGEETEKFQF-SEDVGITTRRLYDTVRSIQNGEVEDTHSWNFKV 406          
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Match: A0A7C6YN04_9BACT (Branched-chain-amino-acid transaminase n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C6YN04_9BACT)

HSP 1 Score: 413 bits (1062), Expect = 2.940e-134
Identity = 191/337 (56.68%), Postives = 251/337 (74.48%), Query Frame = 1
Query:  235 ADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAGNYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVVMTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMVAV 1245
            A LDW++LGF Y D N H+++ +K+G W EGELV+ PY+ +HIA TALHYGQS FEGLKAF  KDG V LFRP+ENA+R+  +A R  M   P D+F+ ACK  +KAN+EF+PPYG+ G++Y+RPLLFG+GA IG+ P+ EYT +V+  PVG YYKGG +   A+VV+DYDRAAP+G G VK+AGNYAA L P++ AK AGYP+ LYLDAK +  +EEF+TSNF A+T D K+VT +SP++LPSITN +L QLA D G+ VE RP+ F EV SF EVAACGTAVV+T + +I +  ++    G +   GP+ + LY+ V+G+Q GE+ D  GW V V
Sbjct:    2 AQLDWKSLGFAYHDTNCHIRYVWKDGRWSEGELVESPYIPMHIAATALHYGQSAFEGLKAFRRKDGKVSLFRPEENARRLAVTARRTCMAVVPEDMFVDACKRVLKANMEFIPPYGTGGSMYVRPLLFGSGAEIGVAPAKEYTFIVLVTPVGAYYKGGLQGVRAIVVDDYDRAAPQGTGHVKIAGNYAASLYPHLEAKAAGYPVELYLDAKEHKWIEEFATSNFLAITKDGKYVTVESPSILPSITNMTLQQLARDMGIPVEVRPIPFEEVTSFAEVAACGTAVVITPVNEIERAGKVYQ-TGPATGCGPILEKLYKAVQGIQYGEIPDTHGWNVDV 337          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI73_9PHAE1.330e-23882.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K8Z6W3_NANGC1.760e-15764.91Branched-chain amino acid aminotransferase n=3 Tax... [more]
A0A6V1P2K0_HETAK1.420e-15063.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5JJ00_FISSO8.750e-13860.00Branched-chain amino acid aminotransferase n=2 Tax... [more]
A0A7X7KWI3_9BACT1.130e-13756.72Branched-chain-amino-acid transaminase n=1 Tax=Len... [more]
A0A7S2GLR1_9STRA1.410e-13661.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2PL05_9STRA2.130e-13657.42Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0G4F3S3_VITBC9.920e-13558.89Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
B8BY53_THAPS2.040e-13458.79Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7C6YN04_9BACT2.940e-13456.68Branched-chain-amino-acid transaminase n=1 Tax=Len... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:3039770..3047254 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score671.0
Seed ortholog evalue3e-190
Seed eggNOG ortholog2880.D8LT73
KEGG rclassRC00006,RC00036
KEGG koko:K00826
KEGG ReactionR01090,R01214,R02199,R10991
KEGG Pathwayko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00036,M00119,M00570
EggNOG free text desc.branched-chain-amino-acid transaminase activity
EggNOG OGsCOG0115@1,KOG0975@2759
EC2.6.1.42
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionbranched chain amino acid aminotransferase
Ec32 orthologEc-12_005520.1
Exons7
Model size2648
Cds size1059
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.715153-UTR-P-fluviatile_contig13:3039769..30411691622815584.715153-UTR-P-fluviatile_contig13:3039769..3041169Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 3039770..3041169 -
1693562352.0683796-UTR-P-fluviatile_contig13:3039769..30411691693562352.0683796-UTR-P-fluviatile_contig13:3039769..3041169Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 3039770..3041169 -
1622815584.8029873-UTR-P-fluviatile_contig13:3047065..30472541622815584.8029873-UTR-P-fluviatile_contig13:3047065..3047254Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 3047066..3047254 -
1693562352.1623738-UTR-P-fluviatile_contig13:3047065..30472541693562352.1623738-UTR-P-fluviatile_contig13:3047065..3047254Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 3047066..3047254 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.7268322-CDS-P-fluviatile_contig13:3041169..30412921622815584.7268322-CDS-P-fluviatile_contig13:3041169..3041292Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3041170..3041292 -
1693562352.0781548-CDS-P-fluviatile_contig13:3041169..30412921693562352.0781548-CDS-P-fluviatile_contig13:3041169..3041292Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3041170..3041292 -
1622815584.7365613-CDS-P-fluviatile_contig13:3041828..30420681622815584.7365613-CDS-P-fluviatile_contig13:3041828..3042068Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3041829..3042068 -
1693562352.0995708-CDS-P-fluviatile_contig13:3041828..30420681693562352.0995708-CDS-P-fluviatile_contig13:3041828..3042068Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3041829..3042068 -
1622815584.7468262-CDS-P-fluviatile_contig13:3042469..30426521622815584.7468262-CDS-P-fluviatile_contig13:3042469..3042652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3042470..3042652 -
1693562352.1142113-CDS-P-fluviatile_contig13:3042469..30426521693562352.1142113-CDS-P-fluviatile_contig13:3042469..3042652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3042470..3042652 -
1622815584.7593613-CDS-P-fluviatile_contig13:3043233..30433831622815584.7593613-CDS-P-fluviatile_contig13:3043233..3043383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3043234..3043383 -
1693562352.1249142-CDS-P-fluviatile_contig13:3043233..30433831693562352.1249142-CDS-P-fluviatile_contig13:3043233..3043383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3043234..3043383 -
1622815584.769504-CDS-P-fluviatile_contig13:3043871..30439891622815584.769504-CDS-P-fluviatile_contig13:3043871..3043989Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3043872..3043989 -
1693562352.1323862-CDS-P-fluviatile_contig13:3043871..30439891693562352.1323862-CDS-P-fluviatile_contig13:3043871..3043989Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3043872..3043989 -
1622815584.778931-CDS-P-fluviatile_contig13:3046580..30467371622815584.778931-CDS-P-fluviatile_contig13:3046580..3046737Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3046581..3046737 -
1693562352.1403449-CDS-P-fluviatile_contig13:3046580..30467371693562352.1403449-CDS-P-fluviatile_contig13:3046580..3046737Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3046581..3046737 -
1622815584.789985-CDS-P-fluviatile_contig13:3046977..30470651622815584.789985-CDS-P-fluviatile_contig13:3046977..3047065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3046978..3047065 -
1693562352.1485178-CDS-P-fluviatile_contig13:3046977..30470651693562352.1485178-CDS-P-fluviatile_contig13:3046977..3047065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3046978..3047065 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1948.1prot_P-fluviatile_contig13.1948.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 3041170..3047065 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1948.1

>prot_P-fluviatile_contig13.1948.1 ID=prot_P-fluviatile_contig13.1948.1|Name=mRNA_P-fluviatile_contig13.1948.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=353bp
MVAAPEFSTTKAPGTADLDWENLGFEYRDVNSHVKFTFKNGAWDEGELVK
DPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAE
RILMEPPPADLFIRACKMAVKANIEFVPPYGSQGALYLRPLLFGTGARIG
LQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVVEDYDRAAPKGVGAVKVAG
NYAADLLPNVLAKRAGYPIALYLDAKTNTLVEEFSTSNFFAVTHDNKFVT
PDSPAVLPSITNKSLMQLAEDEGMVVENRPVQFTEVASFKEVAACGTAVV
MTTIKQIVKGSEIVSINGGSDETGPVCQALYERVRGVQAGELEDKFGWMV
AV*
back to top

mRNA from alignment at P-fluviatile_contig13:3039770..3047254-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1948.1 ID=mRNA_P-fluviatile_contig13.1948.1|Name=mRNA_P-fluviatile_contig13.1948.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7485bp|location=Sequence derived from alignment at P-fluviatile_contig13:3039770..3047254- (Porterinema fluviatile SAG_2381)
CTGGCGTGTATCGCGCTTTCCTTCACACCCGTCAGAAGCTTCGTGCCTCA ACCTACCGTCGGCATCTCTGCCAGATTACCACGGAGAGCGCGCGGTTTGT TGCCGTCGTCGTCGCTGTCGCAGAAACAACATGCGACGGCAGCCATAGCA GCAGGAGCCGCAGAGCAATCACAAGGGCTGGCGCTCCGAATGGTTGCTGC TCCAGAGTTCTCCACGACAAAGGCACCGGGGACAGCGGACCTGGACTGGG AAAACCTTGGCTTTGAGTACAGAGATGGTGAGAGAGATAAGCTGAGCGGT ATATGCACCCGTCGTTACGATAGCGCCGATCCGAGGACTGGGGTGGGCTG GCGACTTGGCTTTCGCAGGGTCGGCATCAACGGTTTTTTGCACGAGGACC GTCCCACATTTTTCTCTCGCGTTCCACAACAAAGGCATACGTGATTGTTT GTGCCTAGCTGGACCTCTGCAGCAACTCTGGCGTACTTGCTCCCGGAAAC TTCGCCGACGCGCTCAGTCAACAGCCACGTCAAGTTCACCTTCAAGAACG GTGCTTGGGACGAGGGGGAGCTGGTGAAGGACCCGTACGTCAAGGTGCAC ATCGCCAACACCGCGCTGCACTACGGGCAGTCGGTTTTTGAGGGGCTCAA GGCTTTCCACGGAAAGGACGGAAGGTGCGCTCGTCGCTGTCGTCTTGGTG TTGTTTGGCGTAATGTCGGCGGCGAGCGCGACTTGGGTTATGTTGGAGGG TGAGGTGCAGACGCAAGAAAACGGTGTAAAACGGCGGATCTACGCGCCAA ATCGCAGGATTGCGCCAAAATGCAGCTTGGATCAATCTTGACCCTTTTTG ATGCCACGCCGCCGGATCGAAGCAGCCTGACAACGCCTCCTTCACACAGA CCGACAGCGGTACACCCTTTCCTGACTTGTCAGCTTGGGCTGGCCACCTT CTGTTGCAACGGAGCGCGCGCGAAGTGCAACATCAGCAGGCCCTTGTCGC CTACCTCCTACCAGCCACGCGTCAGGCTCACGCTGGACCCTTCACTAGCT ACACCGAATTCGAAATTTCCCCTGGACAAAATGCGGCCCAACGACGATGC GCACTCTCCCTGTAGATCTCCACGCAGCAGACGGCTCGAGCGGGAGGGCT CTCGGCTGTTTGTCTGGTGGCAAACGCCTTGATTGATGTAGTCTCGCAGC AGCCATTGGGAAGATCGTATCCAACTCCACCTTCCGTAATTTTGGACACG CGCGCACACACTCCTCCGGTCGAACGCGAGAGAGAAAACAACTGCAAGCG GGTTTGCTCGCGCACAAGAAGGTCCACCGAATTCCGCGTGTACGCTTTTC AGTTGAGATGGTTTTCAGGGCCAAGGGGCGGTCCATGCTCGCTGGTAGGG TCGAAATCCGGCAGGGGCAAACTTCAGCTGATAGAAAAAGTAGGGCTGAA CCGCCCTGACCACCCGATGAAGCCGAATGAGAGCTGAAGCGAAAAGAAGG GCTGCGCACGTCGACCGCTTTCCCTGCCGTCGACGCGTGCGTCTAGATTC TCGGTTACTTTTCAGCTATCACCTTTCGGTTTCGTTGGTTGATCTGGGCC GTGCAGCCCTGTTTTTTCTGTGAGCTGAAGGTTGCCGCTGCTTCCCACCT TGTCGGCGAGCATGGACCGCCCCTTGGCTCTGGGAGTTACTTCGCTTCCC CGGCGCACACGCGATTTCTGGACGCGAGCGAACCCACACGGAGTTAGGAT TGCCCATCACGGTCTGGCGGGGGCAGTTTGTGGGAGAGGAGAGCTGAAAT TTTTTTCCCGCTGGAGCTGTCACGTCGCGTGCATTGGGCCGAGGCGGGTG CACCCGGGCAACAACGAAATCTTGAGCCGTCTGCCACAAAATCAACAGCC GCAGCAGGTGTGCGTCAGAGTCGCGCGGCCACCCTGTTCCGGCCATTTAC CGGCGAGGTGGGGATTCCGAATCGAATGGGGCGCGTGACGGTGTCTGACG CTTGGCCCGCGTTGCTGCGGGAGGCAGGCACGAAGGGCCTGCAGATTTTG CGCTAGTTGCGCCAGAAAGCGGTCGGGGGCCGCGCCAAATTACGATGACG GCCGAGCGGGGTGTCGGAATGTGGTGTACGGCTTTTCGGGCCGTGTCAGG AAAGGGTACGAGGCTGCGTAGACCAATCAGTGTCGCGGGATAGGGTCCAA ACCCCAGGCATATTCTGGCGTATCGCTTTTTGGATCGGGGACCCGCCGGC ATACCAATTTTTGTGGCGTCCGACCTTTTCTTAAGTCTGGACCCATGAGG ACGCGCGAGAGAAGGTCATTTTTTTCCCCCTCCCCACTGCAGCATTCACT CGTGAAATTGATCGTGAAGCCGGCAGAGAAACTTCAATGAAACTTTCATT CGACTGCTTGAAGCACCGCTTGCCCCTTCGCCGACAAAACCGGTGGGAAT ATTCGACACTACACGAACCCGTGTCAGCCAGTTTGCACGCGACCTGCCCA TAGTCCATTGGAGGTACGTGAGTCGAACGCGCCACAGGCGGTGCATAATC CGTACGAGGTTTTATACGGTCCCCTGGGGGAAGGTCTTTTATATGCTGCC CCGCAGCACTTGGCTCCAGCGGGGGCTGACTTGTCCTCGCCGGGACGTGC GTATGCCCTGGAGGAACTCTAGACGGCGTTGCCTTAATGTTATTCTTTTC ATAGTTTTATTACGCCGAGAGTCAAGGCTATGGTTATCGTCATTGTCTGG CGTGTGCAGAAGCGACCAGGATACTTGCCCAATTTTGCGGGTTGGCGGAA GGCACGAATCGGACGCAAAGATAGTGCTGTGCGTTTAGCCTTCGTCGCGT AACGGCATGACAACCTGGAGCAAGCCCGGGTCCCATTTGTAGAAGCCGAC TACCGAAAAATCGTGGTCTAGTGCACGCACTGTCCTGTTTCCTCGCTGCA CCCTCGCCTCATGAAAATAATGAGATCTTTTTTCGCCCCCCCATGCGAAG CCATTTTTTGGCGCTCGTCTTTCAACACCATCATTACAAAACGAATTTGG AAACGACTATAGACTAAGGTATTACAAAATACAACCCTATGGAGCCGATG AGTACCAGTACAGTAAAACGCTTTTTTTTTTTTGTGAAACGACTATCCGA AAATGAAACCCAACCAAGCAGAAGCCTTCTTCTATCGACCGCGCTCCTGC TGTCAAGTTTATGGCCGCCGATTGTTGCTGGTGTCGCCTACGAATGTCCG AACCGATCCAATCAGCGTCAAGCTGTTCCGGCCGGATGAGAACGCCAAGC GGATTCGCGCCAGCGCGGAGCGCATCCTCATGGAGCCGCCACCGGCGGAC CTGTTCATCAGGGCGTGCAAGATGGCCGTGAAGGTGTGTACATGTCGCTG ATGCCGATCAGATTGTAACGCTCCTCTTGTCTGCCTGTCTGCGTGTCCGC CGACCCTTAGCTTGGGTCGGTGGCACGTCAGAAACGAAAGTCGACGATGA TCAAGCCCTGCGCGAGAGCGTGCGGATGCTCGAGCTTACGTAACGACACC CTGTAAAAGCGCGCCAGCGATTCGTTCCCTCCATTTTCGCCAGAGGGGCT GGAACATTCAAAGGCAGCCCATGGGCGGGGATGTGGTCGGGGATGTTATC ATCAGTCCCCTCCGGCTAGGTTCCTTTTCACGTGAGCAGCCACGCAGCGG TTGGGGGAAGGGGGTGGGTACGTCTATTTTTTTTCTGCGAAGAGTTGCGA CTTCAGCATCAGACCCCAAGCTGCGCCGAAGTTCGTTCGTGTCCCTGCCC CCCCCTGCCTCCCCTCCTCTTCGCCAAATCAATCTCAACGTCTGTCCGCT CCGCCGCACTGGCAATGCAAGGCGAACATAGAGTTCGTTCCGCCGTACGG GTCCCAGGGAGCGCTGTACCTGCGACCCCTTCTTTTTGGGACCGGCGCGC GTATCGGTCTTCAGCCGTCGGACGAGTACACGCTGCTGGTGATGGCAATT CCCGTTGGGAACTACTACAAGGTGAATCTTAGCTTCAGATGAAGGATTAT GGACACGTGCTTTCTCGCGCATTTTTTGTTTTTTGAGTAGCTGGGTGTAC GTTGGCATCCAGGGAGCGCGAGAGCCAGTCAAGAGTCGCCGTTCGGAAAG TGTGGCAATAATCCGTATGCCCCTCCGGCATTTACTAACGTGTGGAATGA TAGCAGCACTGGTGTAACTCCATCTTTGGCCCTCGAATTGTGTCTTGCGT CAAAGTGATGTATGTCATCAAGCTCCTGGGGCACCCTGTGGTGTCTGCCT TTCTCCAGATCGTTTCGCTATGTTTCGTTCGAATGCTTGACAACCTCGAA GGAGACGCCATTACCGAAGTTCACCCACTTGAACAAGTTTTCCTGTGCCC TGTCTCGTTGTCTGTTTCTCTCCCCCTCTACGTGTTATTATTTTCCTCCA TTTTCCTCCTTCTTCCGGTTAAACTCACCCTCTTGGCCTACGGTGAGTCA CGCAACCAACAAACACTCGCCCCCGTCGTCCACATGTTTTCCCCCTTCCC CGCCCCTCCCCTACTCGTTGTCTCATCACTCCTGCGACGTCACCTACTGA AGGGCGGGTTCAAGCCGACGACGGCGGTGGTCGTCGAGGACTACGACCGG GCCGCCCCCAAGGGTGTTGGCGCCGTCAAGGTGGCGGGCAACTACGCAGC CGACCTTCTGCCCAACGTGCTGGCGAAAAGGGCCGGCTACCCCATTGCCC TGTACCTGGACGCGAAGACGAACACACTCGTCGAGGTATGTATGTACGCG ACGAAACGAACGCTCAAAATGAAAGCAACTCGCCTTCCGTGTGCCTACCC CGCGCAGTTCGCTACAACAACAGGGGGGGCGGGGTGTTGCTGAGGGAAGT GGAGGGCACGGAGGGGTTGGCGTGGCGTTAAAGTTTGTTGCTGCCGAATC AGCCCGATTCTTCGTGCTGTGCTGTAGGTTGCAGGCCACATGGAGAGTAA TGCTACGTATGATTGTATAAACTTGTTCCATTTTCGCAATATCCACGGTT GTCTTGCATTTGTCCCGTACCCCGCACCCATGTCGTCGCTAGTTCACTTA CCAACCCGCTGGTCGACCCTCCCCCTCCCTCCCGCTCTCCCCCCCCCCGC CCTTCATTGTCTATCTGGTCTCTCGCTCTTATCCAGGAATTTTCCACCTC GAATTTCTTCGCCGTGACTCACGACAACAAGTTCGTCACCCCCGACAGCC CCGCCGTGCTGCCGTCGATCACGAACAAGTCCCTGATGCAGCTGGCCGAA GACGAGGGCATGGTCGTCGAGAACAGACCGGTGCAGTTCACTGAGGTGGC CTCCTTCAAGGAGGTGGCGGCGTGCGGGACGGCCGTAGTGATGACCACCA TCAAGCAAATCGTCAAGGGCAGCGAGGTAGGGAGGGGCGGGAGGCGGGGG GCGGGGGGTGGGGGGCGAGGGGCGAGGGGCGGGATGCGGGGGGCGTGCCC ATTGTCGTGAATGCCGTAGTCGTACGACCATGGCCTCGCATCCCGTCAAA CGCAGGGACGGACCGCATGCCGTATTTTTGCCGGCCAGGCTCCAAAGGCG GCTGGAGGGAAGGGAGTTGTTGGTGGTGATGCTTGCCATCTCGTCGTTGT TCGTCCGGTTATTGGCATGCTTTTGGCAAGTTGCTGTGGGGTTTGGTGTT GCAGTCGTGGTTGCTGATCGTGCCGTCGCTGGTGGTGCTGGTGGGCTGGT GCTGTTGATATGACCTCTGTACAAGTTGAATTCACTGTTGTCGTGGGGAT CGGTCGTTAACTTTGCTATTGCCGTGTGTTTTTTTCCGGTCCGCTGTAGA GGTGTACCTATCCCCTGACACTATGCCCTACCTGCGCCCCCCCCCTGTGC CCCTCGCACTCGCCTCCTTCCGCTCCCTCTCCGTGCGTCCGCGGTTATGC ACTGATGTGCAGATCGTTAGCATCAACGGCGGCTCAGACGAGACGGGGCC GGTGTGTCAGGCACTGTACGAAAGGGTCCGGGGCGTGCAAGCAGGAGAGC TGGAGGACAAATTCGGATGGATGGTGGCTGTCTAATGAGAGGAAGGCAAA ATGTCTCTCTTGAGAGGACGAGACCTCTGAAATTGCCGCCCGCTGGGGAG GAACCGTAGCTCGCTCTTAGTTTAGGGCCGGCCGCTCTCTCAGGACGTGC GCAAGTAGAATGTTGTTCGTCTTGCTGTTTGCCGCACTAAACCCTCGCGC TTTTCTCGAGAGACCGGAACGTCGTTGTGATCATCTCCTGTTTGTTTGGA GTCACTCCTCATCCATCGCTCCCTCCCCTCCCACGCATCCAGAGCCCCCC TTCAAACGCGAGTTTACTGCACTCCTGGTCATGTTCGTCTCACGTGACTC CATGAATTCGCCTGCCACAGTTTTGCGTGTGTTGCTCGTGGCGGTAGTAC AGCGAGTGCCGTCGTTCGTAGTGTTTCGTAGTCGATCCACGGCTTGCGTC TTCGACGCAGGACATCAGAGGCTGGAAAGGCCTAGCAATAAGGGGCTGGA AAGGCCCAGCAGTGCCGAGCTGGTTGCATGGGTGTCGTTTCTCCCCCCAT TTTTTTCGAACCCGACAGTTGACGTTGGGGAGAGGGAGTGTGCTGTAGGT GTTGCGAACGTTGACACGACCCTCTCTCCGTCTACACCCGTTGTTTCATT TCGGTGAGCGGGGTGCCCGGGGGCGGGGGCGGCGGCGGCAGCGTGCGACT GCGCTTGTGTGGTGCGGATTGAGTCTCCACTCCGCGGACAGGATATAACG CTGGGCATTGGCGCTCTCCCGGGACGTGCAAGTGACTTGTCGCACGCACT TCTTGTTTCGCCGCAGCGGAAGTTGTGGCTGCTGTGCCCCTGCCCCTCCC CCTCCCCTCAGTAGCACGGTCAATCTTTGACAGAATCTTTGGGACGCTTG TTAACTTCATGCCGTGTGCGAGAGGAGTTTGCCCGCTCAAGAAGAGTGTC ACGCTGGTGTTCGTTTCCCTCCACGCAGCGGGGTGATGAACTGCCTGCGA TGGATTGGAGAGTTGATTGATTGGATTTGGCTTATTTTGGATTGGATTCA TGACTCATTTTTTATCCTGTGGTTGTGGTGTGTTTCGTGTGTGCGAGTGA GGTGGTTTGCCTTGAGTGGTGATTCGGCAAACAGTCGCGTTTATGTCTAG TGGGAGGTGTTGTTGTAATTTTTGTTCGTGCGAGAGAGGCGTGCATGTCA CCTTCCGGACCTGCTTGCGTCGTGGAAACCTCCCATTGCTTCGTTTTGTG TGCGCGATAAAATTTTCCATCACCATTAGTTGTGTTCGAAATATTGAAGT TTCAAGGTTTACTTTCGTTTGAATTTGAGCGTGTCCATCCAGAGTTCCTG TTCTTTGGGTGACAAGCTGCTCTTGGTGTGGAACTCCTCGATAGGAAGGA AGAAAACCAGCTCAATCTCGTCTTTTGAAACCGGC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:3039770..3047254-

>mRNA_P-fluviatile_contig13.1948.1 ID=mRNA_P-fluviatile_contig13.1948.1|Name=mRNA_P-fluviatile_contig13.1948.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2118bp|location=Sequence derived from alignment at P-fluviatile_contig13:3039770..3047254- (Porterinema fluviatile SAG_2381)
ATGGTTGCTGCTCCAGAGTTCTCCACGACAAAGGCACCGGGGACAGCGGA
CCTGGACTGGGAAAACCTTGGCTTTGAGTACAGAGATGATGGTTGCTGCT
CCAGAGTTCTCCACGACAAAGGCACCGGGGACAGCGGACCTGGACTGGGA
AAACCTTGGCTTTGAGTACAGAGATGTCAACAGCCACGTCAAGTTCACCT
TCAAGAACGGTGCTTGGGACGAGGGGGAGCTGGTGAAGGACCCGTACGTC
AAGGTGCACATCGCCAACACCGCGCTGCACTACGGGCAGTCGGTTTTTGA
GGGGCTCAAGGCTTTCCACGGAAAGGACGGAAGTCAACAGCCACGTCAAG
TTCACCTTCAAGAACGGTGCTTGGGACGAGGGGGAGCTGGTGAAGGACCC
GTACGTCAAGGTGCACATCGCCAACACCGCGCTGCACTACGGGCAGTCGG
TTTTTGAGGGGCTCAAGGCTTTCCACGGAAAGGACGGAAGCGTCAAGCTG
TTCCGGCCGGATGAGAACGCCAAGCGGATTCGCGCCAGCGCGGAGCGCAT
CCTCATGGAGCCGCCACCGGCGGACCTGTTCATCAGGGCGTGCAAGATGG
CCGTGAAGCGTCAAGCTGTTCCGGCCGGATGAGAACGCCAAGCGGATTCG
CGCCAGCGCGGAGCGCATCCTCATGGAGCCGCCACCGGCGGACCTGTTCA
TCAGGGCGTGCAAGATGGCCGTGAAGGCGAACATAGAGTTCGTTCCGCCG
TACGGGTCCCAGGGAGCGCTGTACCTGCGACCCCTTCTTTTTGGGACCGG
CGCGCGTATCGGTCTTCAGCCGTCGGACGAGTACACGCTGCTGGTGATGG
CAATTCCCGTTGGGAACTACTACAAGGCGAACATAGAGTTCGTTCCGCCG
TACGGGTCCCAGGGAGCGCTGTACCTGCGACCCCTTCTTTTTGGGACCGG
CGCGCGTATCGGTCTTCAGCCGTCGGACGAGTACACGCTGCTGGTGATGG
CAATTCCCGTTGGGAACTACTACAAGGGCGGGTTCAAGCCGACGACGGCG
GTGGTCGTCGAGGACTACGACCGGGCCGCCCCCAAGGGTGTTGGCGCCGT
CAAGGTGGCGGGCAACTACGCAGCCGACCTTCTGCCCAACGTGCTGGCGA
AAAGGGCCGGCTACCCCATTGCCCTGTACCTGGACGCGAAGACGAACACA
CTCGTCGAGGGCGGGTTCAAGCCGACGACGGCGGTGGTCGTCGAGGACTA
CGACCGGGCCGCCCCCAAGGGTGTTGGCGCCGTCAAGGTGGCGGGCAACT
ACGCAGCCGACCTTCTGCCCAACGTGCTGGCGAAAAGGGCCGGCTACCCC
ATTGCCCTGTACCTGGACGCGAAGACGAACACACTCGTCGAGGAATTTTC
CACCTCGAATTTCTTCGCCGTGACTCACGACAACAAGTTCGTCACCCCCG
ACAGCCCCGCCGTGCTGCCGTCGATCACGAACAAGTCCCTGATGCAGCTG
GCCGAAGACGAGGGCATGGTCGTCGAGAACAGACCGGTGCAGTTCACTGA
GGTGGCCTCCTTCAAGGAGGTGGCGGCGTGCGGGACGGCCGTAGTGATGA
CCACCATCAAGCAAATCGTCAAGGGCAGCGAGGAATTTTCCACCTCGAAT
TTCTTCGCCGTGACTCACGACAACAAGTTCGTCACCCCCGACAGCCCCGC
CGTGCTGCCGTCGATCACGAACAAGTCCCTGATGCAGCTGGCCGAAGACG
AGGGCATGGTCGTCGAGAACAGACCGGTGCAGTTCACTGAGGTGGCCTCC
TTCAAGGAGGTGGCGGCGTGCGGGACGGCCGTAGTGATGACCACCATCAA
GCAAATCGTCAAGGGCAGCGAGATCGTTAGCATCAACGGCGGCTCAGACG
AGACGGGGCCGGTGTGTCAGGCACTGTACGAAAGGGTCCGGGGCGTGCAA
GCAGGAGAGCTGGAGGACAAATTCGGATGGATGGTGGCTGTCTAAATCGT
TAGCATCAACGGCGGCTCAGACGAGACGGGGCCGGTGTGTCAGGCACTGT
ACGAAAGGGTCCGGGGCGTGCAAGCAGGAGAGCTGGAGGACAAATTCGGA
TGGATGGTGGCTGTCTAA
back to top