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|
Homology
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 2.010e-133 Identity = 390/573 (68.06%), Postives = 412/573 (71.90%), Query Frame = 1
Query: 1 MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK-NAADGIADGLDRLMRDVDGNEQQPPLVARGFANGG---------------AVTATEAFLPSEPANSHSAQASQGGGASAGVAAARAPTASTDYPTSPARAATATVPAKPYEPQARGSLMVSPPTSSSGGPGAAVATVEPAKEAPGSPVVRLTSSKSPPPPRARKGGAKXMXXXXXXXXXIASGGEVVNLSGFESFTPAAAAAGDGVE--------DADLALARKLQEEEDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFDKDKYKNAKGIGSDMLFGAKDDDPEEQVRRKMKVQEYSHSAAISSDMYFDRERPGGGGGYDDRGGGVGIGDMADHIASSAAAELKGAAEAAGKLKEMT---MDFFENMVG 1638
MQDQYLP DVVKSTFRRLRSKPDNK+CFDC TRNPTWAS TYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEME MKRGGNGNARSFFRSHG+TDMEKSEQKYHSRAA MYRAHLKK MADP V TPP SP+ + D +ADGLDRLM D+DG + A+GF NGG A A F + P +SH A + G A+ G AAA D P PA P KPYEP+ RGSL VSPPT+ P AA V+ K +PVVRL SSKSPP PR RKGGAK MXXXXXXXXX SGG V LSGFE T A DADLALARKL XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SFDK KYKN KGIGSDMLFGAKDDDP+EQ RR MK QEYS SAAISSDMY D GGVG GDMAD IA+SAAA+ AAGKLK+MT +D +NMVG
Sbjct: 1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDG-KPAASAPAKGFTNGGXXXXXXXXXXXPSVDAAAAAAKFAQAFP-SSHPAAPTSGSAAAGGHAAA-------DVPAPPA------APVKPYEPKPRGSLSVSPPTA----PAAAAGAVDEPKA---TPVVRLISSKSPP-PRIRKGGAKKMXXXXXXXXXXXSGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXX--XXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXXXXXXXXXXXXYD--GGVGFGDMADQIAASAAAQ------AAGKLKDMTKGFLDDLQNMVG 540
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.170e-57 Identity = 100/160 (62.50%), Postives = 127/160 (79.38%), Query Frame = 1
Query: 13 YLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK--NAADG--------IADGLDRLMRDVD 462
Y+ D+VKSTFRRL++ DNK+CFDC TRNPTWASVTYGIF+CYDCSAVHRNMGVH+TFVRS+ELDKW+ E+++MKRGGN AR++F+SHG++DM K++ KY SRAA YRAHLK+++A ETP P+ N+A G IA GLDR+MRD++
Sbjct: 7 YVEADLVKSTFRRLQAHRDNKVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIA----ETPDPAADVWNSAHGARDADEAAIACGLDRIMRDIE 162
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.800e-44 Identity = 84/162 (51.85%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 16 LPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME-KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAAD-----GIADGLDRLMRD-VDGNEQQP 480
+P + S F+RL++K DN+ICFDC TRNPTWAS T+G+F+C DCSA HR MGVHVTFVRS+ELD+W ++ M+ GGNGNA +FFRSHG+ D+ K+E+KY S AA Y+ HLKK ++E PP P D G D LD + D +D E+ P
Sbjct: 16 VPSEAKTSFFKRLKAKRDNRICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKK-----LLEEAPPKPIETQDVGAKTGATDPLDDMFADEMDAQEEAP 172
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.050e-43 Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 1 MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME-KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAADGIADGLDRLMRDVDGNEQQ----PPLVAR 495
M +Y+ ++V S F++LR+K NK+CFDC +RNPTWAS T+GIFIC DCSA HR MGVH+TFVRS+ELD+W P +++ MK GGN NA +FFRSHG+ DM K EQKY S AA Y+ HLKK+M+ VE P P+ + +D L+ DV G E PLV R
Sbjct: 1 MNGKYVTQEVKNSAFKKLRTKGANKVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVEEVPEEPQRKP---SVDIDSLLLDVQGVEPMLTPPKPLVGR 167
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.060e-43 Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 37 STFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIV------ETPPPSPKNAADGIADGLDRLMRDVDGNEQQP 480
+ F+R++S+P+N++CFDC TRNPTWAS TYG+FICY+CSA HR +GVH+TFVRS++LD+W P ++ M+ GGN NA FFR HG+T K EQKY SRAA +Y+AHL K++AD I+ E PPP+ AA G GLD LM E P
Sbjct: 12 AAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPPPPTDTVAAVGC--GLDNLMLSYQEPEDVP 163
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A1D6GD40_MAIZE (ADP-ribosylation factor GTPase-activating protein AGD10 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6GD40_MAIZE) HSP 1 Score: 152 bits (385), Expect = 2.100e-39 Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 7 DQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKK 363
D Y ++ + FRRL++KP+NK+CFDC +NPTWASVTYGIF+C DCSAVHR++GVH+TFVRS LD W P +++ M GGN A +FF+ HG TD K E KY SRAA +YR L K
Sbjct: 11 DAYTDKNAI---FRRLKAKPENKMCFDCNAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVEAKYTSRAAELYRQMLNK 126
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: K0TKZ9_THAOC (Arf-GAP domain-containing protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKZ9_THAOC) HSP 1 Score: 152 bits (385), Expect = 9.340e-39 Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = 1
Query: 16 LPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVM 369
+P + FRRL++ P NK+CFDC PTWASVTYGIF+C DCSA HRNMGVH+TFVR+++LD+W +++AMK GGN NAR FF HG +DM+ S +KY+ +AA YRA L+K++
Sbjct: 23 IPTADKNAQFRRLKNLPGNKLCFDCPATRPTWASVTYGIFLCLDCSAAHRNMGVHLTFVRAVDLDEWTQRQIDAMKIGGNENARKFFSKHGCSDMKGSNKKYNHKAARAYRAELEKLV 140
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7C9CZV2_OPUST (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CZV2_OPUST) HSP 1 Score: 152 bits (383), Expect = 1.540e-38 Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 1
Query: 43 FRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVE------TPPPSPKNAADGIADG-LDRLMRDVDGNEQQPPLVA 492
FR+L++KPDNK+CFDC +NPTWASVTYGIF+C DCSAVHR++GVH++FVRS LD W P +++ M GGN A FF+ HG TD K E KY SRAA +YR L K +A V+ +P SPK A+D +D + ++ ++ P L A
Sbjct: 13 FRKLKAKPDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMCFGGNSRAHIFFKQHGWTDGGKIEAKYTSRAAELYRQILAKEVAKSSVDESSLPSSPAHSPK-ASDRFSDASISEAQKESLAQKETPELPA 168
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S1CBA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA6_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.540e-38 Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 13 YLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME--KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK--NAADGIA-DGLDRLMRDV 459
YL ++ RLR+ P N +CFDC RNP+WAS T+G+FIC CSA HR MGVH++FVRS +LDKW P +ME M+ GGN NA FF++ G +D K E+KYHSRAA++Y+ HL++++ + P SP+ +A +G DGLD L V
Sbjct: 1 YLTKEETVRKMARLRALPGNNVCFDCGARNPSWASATFGVFICIGCSATHRRMGVHISFVRSCDLDKWTPDQMELMRIGGNANAAKFFKTKGWSDATGGKHEEKYHSRAANLYKQHLQRLVQ---TSSTPASPEAASAPEGFTIDGLDDLELSV 151
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7N1A3H7_KALFE (Arf-GAP domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A3H7_KALFE) HSP 1 Score: 156 bits (395), Expect = 1.000e-37 Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 37 STFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVE 387
+ FR+L+SKP+NK+CFDC +NPTWASVTYGIF+C DCSAVHR++GVH++FVRS LD W P +++ M GGNG AR FF+ HG D K E KY SRAA +Y+ L K +A +VE
Sbjct: 11 AVFRKLKSKPENKVCFDCDAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKMMSYGGNGRARVFFKQHGWIDGSKVEAKYTSRAADLYKQLLSKEIASSVVE 127
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 429.9 |
| Seed ortholog evalue | 1.8e-117 |
| Seed eggNOG ortholog | 2880.D8LT65 |
| Preferred name | ARFGAP2 |
| KEGG ko | ko:K11855,ko:K12493,ko:K16682 |
| KEGG Pathway | ko04144,ko04390,ko04391,ko04392,map04144,map04390,map04391,map04392 |
| GOs | GO:0001654,GO:0001745,GO:0002790,GO:0003674,GO:0005096,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005793,GO:0005794,GO:0005798,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007275,GO:0007423,GO:0008047,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009653,GO:0009887,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0030117,GO:0030120,GO:0030126,GO:0030135,GO:0030137,GO:0030234,GO:0030659,GO:0030660,GO:0030662,GO:0030663,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033036,GO:0034613,GO:0035964,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048200,GO:0048205,GO:0048475,GO:0048513,GO:0048592,GO:0048731,GO:0048749,GO:0048856,GO:0050790,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060589,GO:0061024,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090596,GO:0097708,GO:0098588,GO:0098772,GO:0098796,GO:0098805 |
| EggNOG free text desc. | GTPase activator activity |
| EggNOG OGs | COG5347@1,KOG0706@2759 |
| EC | 3.4.19.12 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01002,ko03019,ko03036,ko04121,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Arf GTPase activating protein |
| Ec32 ortholog | Ec-12_005420.1 |
| Exons | 4 |
| Model size | 3145 |
| Cds size | 1641 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.3046665-UTR-P-fluviatile_contig13:3013662..3015166 | 1622815584.3046665-UTR-P-fluviatile_contig13:3013662..3015166 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 3013663..3015166 - |
| 1693562349.3070729-UTR-P-fluviatile_contig13:3013662..3015166 | 1693562349.3070729-UTR-P-fluviatile_contig13:3013662..3015166 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 3013663..3015166 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815584.3183827-CDS-P-fluviatile_contig13:3015166..3015205 | 1622815584.3183827-CDS-P-fluviatile_contig13:3015166..3015205 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3015167..3015205 - |
| 1693562349.3240643-CDS-P-fluviatile_contig13:3015166..3015205 | 1693562349.3240643-CDS-P-fluviatile_contig13:3015166..3015205 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3015167..3015205 - |
| 1622815584.33345-CDS-P-fluviatile_contig13:3016377..3017616 | 1622815584.33345-CDS-P-fluviatile_contig13:3016377..3017616 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3016378..3017616 - |
| 1693562349.3374789-CDS-P-fluviatile_contig13:3016377..3017616 | 1693562349.3374789-CDS-P-fluviatile_contig13:3016377..3017616 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3016378..3017616 - |
| 1622815584.3435473-CDS-P-fluviatile_contig13:3017981..3018269 | 1622815584.3435473-CDS-P-fluviatile_contig13:3017981..3018269 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3017982..3018269 - |
| 1693562349.3472328-CDS-P-fluviatile_contig13:3017981..3018269 | 1693562349.3472328-CDS-P-fluviatile_contig13:3017981..3018269 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3017982..3018269 - |
| 1622815584.3531504-CDS-P-fluviatile_contig13:3020474..3020549 | 1622815584.3531504-CDS-P-fluviatile_contig13:3020474..3020549 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3020475..3020549 - |
| 1693562349.3555577-CDS-P-fluviatile_contig13:3020474..3020549 | 1693562349.3555577-CDS-P-fluviatile_contig13:3020474..3020549 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 3020475..3020549 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1944.1 >prot_P-fluviatile_contig13.1944.1 ID=prot_P-fluviatile_contig13.1944.1|Name=mRNA_P-fluviatile_contig13.1944.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=547bp
MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDC
SAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDM
EKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAADGIADGLDRLM
RDVDGNEQQPPLVARGFANGGAVTATEAFLPSEPANSHSAQASQGGGASA
GVAAARAPTASTDYPTSPARAATATVPAKPYEPQARGSLMVSPPTSSSGG
PGAAVATVEPAKEAPGSPVVRLTSSKSPPPPRARKGGAKKMGARKLGAMK
IASGGEVVNLSGFESFTPAAAAAGDGVEDADLALARKLQEEEDLAAAVAV
PSSRLAAVASAALVPEASRSKAGAATSAGGSIYRSANDSSSSSIASGGGT
GGAYGYRNGSSGGGGGYNNERSYGGGAGGGAGAGGSSSFDKDKYKNAKGI
GSDMLFGAKDDDPEEQVRRKMKVQEYSHSAAISSDMYFDRERPGGGGGYD
DRGGGVGIGDMADHIASSAAAELKGAAEAAGKLKEMTMDFFENMVG* back to topmRNA from alignment at P-fluviatile_contig13:3013663..3020549- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig13.1944.1 ID=mRNA_P-fluviatile_contig13.1944.1|Name=mRNA_P-fluviatile_contig13.1944.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6887bp|location=Sequence derived from alignment at P-fluviatile_contig13:3013663..3020549- (Porterinema fluviatile SAG_2381)
ATGCAGGACCAGTACTTACCGGAAGATGTGGTGAAGAGTACGTTCAGGCG
ATTGCGGAGTAAACCCGACAACAAGGTGAGTGCTTGCCACTTGCCACCCT
CAAAACACACGGCGTATTTCACGCCTGAAATATTAGTGGGGAAAACGGCC
TGTTGGTGTGGATTTTGCCGCATGTGGTCGGCGGCCTAGTTCCTAGGCAC
AACGAAGTCGTCGCCCGTCAACTTTCTGAACATAATCACCAACACACGTA
GCCAAATTCGTCTCCTGCCTCAAGGACGAAACGGAGCTTTTGGGCAACCG
TTACGGTGTGTTGCGGAAGTGAACGAGTCGGGCAAACGAAAACCTTTTTT
TTCAAGTACGAAGTGTGGCCGCCACAGGAGCGGCGGGCTGTGAGTGTGCG
TTTGCGGCAGGGCGGTCATTTTGTCCCACGCGATTGATTGTCGGGTGATG
CCTATCGCATTCGTTGTCTCGCTGCAGGCCATTGTGTCGACGGAGATTCA
ACCCACTTTAGCAACTGGCCACCTTGACGAGGCTTCTTCTTCTGCAGCCG
GTCCCACAACTGTTCCACGCTCTCGTCGTGGGACTTGCCTGTTCCATTCT
GAACAAACTTAACCTCAGTCGGATCTCCTTTTACGAGAGCCCAAAATCCA
AACTGGTTGGATTGCACCAGCAGACAGCAAGCCGCTCTCGTTCTCGTCCA
CCAGGAGCGCTGGTCAGGCCCCGGAACTAAGCGGTGTTTTGTTTGGTCGC
GTGCTGTTCGACTCGTTGTCGCAAACTTCGCTTTTGCAACAGCAGTCCTG
GCGCACACAACCAACCTGAGCCTACCATAGTTTGCGGCGGGCGATCTCAG
ACATACAGCAGGGTCGCAGCAGTGCATTGCATAACAGTGCAATGCGAACT
ATTGACAGTATTTGCCCATGGGCACCATATCCACGGGTGGCTTCTACAAA
TTGCCAATCACACGATGCATCACGCAAGGCGCTACAACGCACGCCATACT
GATCTCATCCCTCCGGGAAACCTGTGTGACTGCTGTGGTCGTAAACAGGC
AATCCCATTTCGGCCTTTCATTGCGCCAGACATGACGAGGGACTGCGAGG
TGTTAAGCTGGCACGCCACCGTCTACAACTTCCTCATTGGACATTCCTTG
ATTGTAGCAGCATCCGATGTCGGTTTGGCTCTCATGGCAGAATGATTTCT
TGACATGGCACACAACACAGACCGTGAGTGTCATGCCATGACGCCCCCCT
TCCCCAACCTGCCAACGACTTTTTCAGTGATAGGAGAACATGCTATCCGT
CACCTCGGTTACGACTTTGTGCCGGAGCTTCCTTCGGTGGACCGTTCCAT
CCTGATGTCATGGCTTGTTATACTTTTAAGTCGTCCTCACAAGGGGTTCT
GTACACGCCGTCGTTAATGTACACTGGGCCCATGCCGTGGTTGCTCGAAG
AGCAGGCCACGTCCGCCGGGTTGCTCCAAAAGCAGGCCAGGTTTGCTGGT
GGTTGCTCCAGAAGCAGGCCAGGTCTGCTGTTGCACGGGCAGGGACTGAC
CTGCCCCCTCCTCAACGCAGGGAATGGCCTTCCCTAACACATCCAGAGCC
CGCTTCCAGATATCGGCAAGTGACTTCACTCCAGCAATGAGCCGGTCTAA
AGGATCGTCAGGAAGACGTCAACGAGTTTGGCGGCATCACACGCGTGTGT
AGGGCCGTCAAATTTCGGGGGTTCGCCTCCTTTTTGTCGAAAACCTCGAC
CTTTCTTCCTGCTTCAATGACGAGAATAGCAATGCTGCAGTTATGCCCTA
CAATGTCCATCTCACATTCGCGAAACCTTCGGGGATCACGTGTCGCACGA
TCACTGTTGTTTGGAGAGAAAATCGAATCACTGTAAAGGGAGGAACACCT
GTCTCGAGTGCTACTACTGCTATCGTCACACAAACACACACACCAAAATG
TTGTCAGCGCCGATGGGGTCGACGGGTATCGTCCCCGTGTATCTGCGAAG
CTAAGGGTTGCATGTGTTTTTGTTGGATTTTGCGATCTTCAAATTCTTCG
CGTCAGAACCACGCAACTCTCCGATGATTGACCCCTGAGAACGCATCCTC
GAAACCCGGGTTATCCTGCGCAAAACCGACAAGCAGTATCTTAAGCCCGC
CCCCTTTCCTCCCTCCCCCCCGCCCGGTCGTCGCTTTTGGCACAGACACC
GCTCTCGACAATGTATCTCTTGGCTGCAAACGTAACTCCCCCCCTCCCCG
CTCGCACCAAAAAACAAAATGCAAACAAAGATTTGCTTCGACTGCCGCAC
GCGGAATCCCACGTGGGCGTCGGTGACGTACGGCATCTTCATCTGCTATG
ACTGCTCCGCGGTGCACCGAAACATGGGGGTCCACGTGACGTTCGTCCGC
AGCATCGAGCTCGACAAGTGGAAGCCCTCGGAGATGGAAGCCATGAAGCG
GGGTGGCAATGGCAACGCCAGGTCTTTCTTCCGTTCCCACGGGATCACTG
ATATGGAGAAGTCGGAGCAGAAGTACCACTCTCGCGCGGCGCACATGTAC
CGCGCCCACCTCAAGAAGGTCAGTAGGTCAATTGGCCATTCGATTAATCG
GTCAATCGGTCCGGGTTGCTTCTTTCCTTTCTCACTTCCTAGCTGCAGCG
CTGCAGCGCTGCCGTGGCTGCCGAATGTGGCTGCTGCTGCTGCTGTGTTG
CTGCTTAACCGCCTGTCAGTTCCTGTGTGGCTCATCTCTTTGCTCCGGCG
TGTGGTGGTTCACGGCGAAATTGCCAGCAAGGACTCCCCAGCATCACGAC
CCACCCAAGCTCTACAACCGTTGCCAACCCTGCTGGTGTCTCCTCCCGCC
CTGGCGCGTTCGCTACATGCTTCGTCTCACCGCGCCCTCGACTTTTATGT
GTTTGTTATTCATATTTTAAACGCACATTGCAGGTGATGGCCGACCCCAT
CGTCGAGACTCCGCCGCCCTCTCCGAAGAACGCAGCCGACGGTATCGCCG
ACGGCTTGGACCGCCTAATGCGGGACGTGGACGGTAACGAGCAGCAGCCG
CCGCTGGTGGCCAGAGGGTTCGCGAACGGCGGTGCAGTCACCGCCACCGA
GGCCTTCCTTCCCTCGGAGCCCGCCAACTCGCACTCGGCGCAGGCCAGTC
AGGGAGGTGGTGCATCAGCAGGAGTAGCAGCAGCGAGGGCTCCTACAGCT
TCCACTGATTATCCTACTTCACCTGCGCGGGCAGCAACCGCAACCGTACC
GGCCAAGCCGTACGAGCCGCAGGCCCGAGGAAGCCTAATGGTGTCACCGC
CGACCTCGTCATCGGGGGGGCCTGGAGCGGCGGTGGCGACAGTAGAGCCC
GCGAAAGAGGCACCGGGGTCGCCTGTGGTCCGGCTGACTTCCTCTAAGTC
GCCCCCTCCGCCCCGCGCCCGGAAGGGCGGCGCCAAGAAGATGGGCGCGA
GAAAGCTCGGCGCGATGAAGATCGCCAGTGGTGGAGAGGTCGTGAACCTG
TCGGGCTTCGAGAGCTTCACCCCGGCGGCGGCTGCGGCAGGGGACGGGGT
AGAGGATGCCGACCTCGCGCTCGCCCGCAAGCTGCAGGAGGAGGAGGACC
TGGCGGCCGCGGTGGCGGTTCCATCTTCCCGCCTCGCGGCCGTGGCATCG
GCGGCGCTTGTGCCTGAGGCGAGCAGGAGCAAGGCTGGGGCTGCAACCAG
CGCCGGCGGGTCGATCTACCGCTCCGCGAACGATTCCTCGTCATCTTCCA
TCGCCTCGGGCGGTGGGACGGGCGGGGCGTACGGGTACCGAAATGGTTCC
AGCGGCGGCGGCGGAGGTTACAACAACGAGAGAAGCTACGGCGGCGGGGC
AGGAGGGGGCGCCGGCGCCGGCGGGTCTTCCTCCTTCGACAAAGACAAGT
ACAAGAACGCCAAGGGCATCGGGTCGGACATGCTGTTCGGGGCCAAGGAC
GATGACCCCGAGGAGCAGGTGCGCAGGAAGATGAAGGTGCAGGAGTACAG
CCACTCGGCCGCCATCAGCAGCGACATGTACTTCGACAGAGAGCGGCCGG
GCGGCGGCGGCGGGTACGACGACCGCGGCGGCGGGGTGGGCATCGGGGAC
ATGGCGGACCATATCGCTTCGTCGGCGGCGGCGGAGCTCAAGGGCGCCGC
GGAGGCGGCGGGAAAGCTCAAGGTTAGACTGTTAGACTGGTTTATTTTGA
AGCGCGGAGGGCACTGCTGTTTTGCTAGCGAGTCGCACTTGTCGCGGGAA
GCACCGCGTCTCTCGTGCTCGTCCCTGTATGTTTTTTTTTACGCCCATGG
TGTTCGCTGAAGCAATCGAATTTCTCGCGCTTGCGTTATGTCGCGCGTGT
GATTGCGGTGTTACAGGCCGCTCCGATGTCGCCGAGGTACAGTTCTTTGC
GTGCAAGACATTTCGGGTGTGGCAAAGACTCCTTTAAGCGTGGTGTCGGT
TTTGTGAAGTGCCCTTGGGCTTTCTTTTTTTTCGCGGGGCGCGTTTTGGA
TGCGGGGAGAAATCCCGAGCGACACGGGGGCTTCGCGTAGCCAGCGCGTC
CATCGAAGAGCAATGCTGACTTGCAAGCCTCGATCAGTGTGGGGGGGCGG
CTGCAGAGATGTACGACATGAAATTTGATTCGACGGGACGCCCTTGGGTT
ACTTTTCCATGAAGCATTTTTTTCTGCTGTATTGACAAAAACCAAAAATT
CAAAACGTGACAAAAAGAAAGATTAATTGAAAGAAAGGAACACCCTTAAA
AGTGTGTCTTCGGCGTCCCAAAACCTGGCTTACAAATCGCGCCACAGTCA
GCCCTGATCGCATTCGGGGTAAAAAAATTTGAGCAACTCCGGTTTTGCAA
AACCTCCAACAGATACACGTTGTCATCTGTCGATCAGCCTGTCGTTTTTT
TTTTTTTCCACAAGACAAGTAACCAAGCTTGCAAGTCTGAGTGGAAAGCC
ATCTAGCTGACGTATGGCACGAGGGAAGCAAGCCTTCAAGCTAGGCGCGA
GTGGCGCGCTCGGGAAAACAATCGTTCAAAACGCAGGATTGGTTCGCCTC
TCGCTCGCGCTCTCCGCCGGCGATTTTTGCCTACTTCGTGAATAGCATTT
GGACATGCGCGTTGTTCCATAAAACATCGCAGTATTGTTTCTCATTTGAC
CTTGACGAAGCCACTAGAGCAAGCTCTCCATGCAACTTTCACATGGCTGG
GTTCCGCCGCTATCTGTGAGGAGACTTTCCCGTGCTGTTGAATGCCAGCA
AGACGTTTTTAACAATCCTCACAAAGCAGGTTTTGTTCTCTCCGTTTATC
ATCCCCTCCCCGTCTGTCCCTCTCTGCTCTGACCCCCGACACAGGAGATG
ACCATGGACTTCTTCGAGAACATGGTAGGCTGAGCGAGCGGGTGGGGCCG
GGGGAAGGAGGCAGGCAGGCAGGCAAGCAGGAGATGCGGAGGGAGGAAGC
AAACAAGCGGGGGCGGGTAGGAAACAAAGACGCCGCTCGCGAAACCAACA
CGGAATAACTCGGCTCGACTCCGAAGGAGCGTCGCCTCGAACGAAAGCAA
GCTCGCCGCCTTGGCGATGCTTTTCCTCGTCGCTCTGCCCGTGCGAAAAC
GAGGGGCGTGATTGGGTCCGCCCTGTAAAAAAACGGGGAACGCGTCAAAA
GGAAGAAACAGTGGCGGCGAGCAATAACCGCATTTTGGTTGTTGGGCTTT
CCCACCTTTTGTGGTCTTTCAAACAACCTTTGGGGGGAGGGGACAGCGAG
GAGGGCCTTTTCCGGGGAAGTGGCTTGGCTTGGTGTGTGTGGTGGATTTT
ATTGAAACGGGGTCACGATATACCTCATGTCTTCCTTTTCGTGCCGATTA
CACTGCTGATCTTTCTTTTTTTTTTTTGTTCCTCGTTTTTTCCCTTCTCT
CTCTTGTGTCCCGAAAAGGCCGCCTTGTGGAAGGGGATCGTATTGCGCCT
TTTCAGCTTTTTCTTGCCTCGTTGAACCACCAAACTATCGCCCCCACTCC
TGCTTGTTTTGAAATGCGTTGCGTCCGCGGGCCGCGTCATCTTCTTCCAC
GGCCGTGGAGAGTCGGGGTGCGTCCGCCGCGGATCGAGCGTTATAAATTC
GTCCGGTAGCGACGAGCTCAACGCACGCTTCGTGGAACCCCATTTTCTAT
CCGCGTTTTCGCTCTTATTATTGTGAACTTTTTCTTGAGGTAGCTTCGAC
GCTCACACGAATACGGGCAATCGGGAGAGGTCTGGGACATGACCTAATGC
GGGTCACTGTGACCCCGACGCCTTGAGAGTTCTGCCGGTGAACCCTTGGG
GGATTTTTCATTTTTTTTAGAGCGAGAACTGGAGAGTCGAAGCAGTTGTT
TTTTGCGCAGCTGGCTGATATTATTTGTGTGTTCGGGTGTGTTGCGTTTT
ATCGTCACACCGCTACGGAGGTTCTTGGCAAAAGATCAACAGCGTCAGGT
GTTGTACGCAAGAGTTGGGGGATCTCGTGCTGATTTGACGCTAGGCCCAA
TCTCCATCTTTAATGCTTTTTGTCGGCGGTGTGATCGGATTCGAGATTTT
TTTGGAAGGAGAGGAGCGTCGCATGAAGTGGTTGCCTTGTCGGGCGGTGT
TATGTGTGATGCCGGTTTTTCTGAGACATCGAAAGCGCATCGCCATCGTT
GTTTTTTTTCTTATTATTATCTTATTCTCTTTGTCCAACGGGGGCATTTG
GTACGTCTCTGGGCACGACAACCGACGAATAGGAAAGAAAAAGGATGCGA
AACCTGCCCCCCTCGCGACCGTTCCTTCCTAGTCCGCGTACATGCGCGTG
TTGTCCAAAATGGCGCGAAGGACTCTGGAGGGAGCGTGTCGCCTGAAACC
TCGACCGACGATTAAGACTGCTTGCACTCGGGAGGCC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig13:3013663..3020549- >mRNA_P-fluviatile_contig13.1944.1 ID=mRNA_P-fluviatile_contig13.1944.1|Name=mRNA_P-fluviatile_contig13.1944.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3282bp|location=Sequence derived from alignment at P-fluviatile_contig13:3013663..3020549- (Porterinema fluviatile SAG_2381)
ATGCAGGACCAGTACTTACCGGAAGATGTGGTGAAGAGTACGTTCAGGCG
ATTGCGGAGTAAACCCGACAACAAGATGCAGGACCAGTACTTACCGGAAG
ATGTGGTGAAGAGTACGTTCAGGCGATTGCGGAGTAAACCCGACAACAAG
ATTTGCTTCGACTGCCGCACGCGGAATCCCACGTGGGCGTCGGTGACGTA
CGGCATCTTCATCTGCTATGACTGCTCCGCGGTGCACCGAAACATGGGGG
TCCACGTGACGTTCGTCCGCAGCATCGAGCTCGACAAGTGGAAGCCCTCG
GAGATGGAAGCCATGAAGCGGGGTGGCAATGGCAACGCCAGGTCTTTCTT
CCGTTCCCACGGGATCACTGATATGGAGAAGTCGGAGCAGAAGTACCACT
CTCGCGCGGCGCACATGTACCGCGCCCACCTCAAGAAGATTTGCTTCGAC
TGCCGCACGCGGAATCCCACGTGGGCGTCGGTGACGTACGGCATCTTCAT
CTGCTATGACTGCTCCGCGGTGCACCGAAACATGGGGGTCCACGTGACGT
TCGTCCGCAGCATCGAGCTCGACAAGTGGAAGCCCTCGGAGATGGAAGCC
ATGAAGCGGGGTGGCAATGGCAACGCCAGGTCTTTCTTCCGTTCCCACGG
GATCACTGATATGGAGAAGTCGGAGCAGAAGTACCACTCTCGCGCGGCGC
ACATGTACCGCGCCCACCTCAAGAAGGTGATGGCCGACCCCATCGTCGAG
ACTCCGCCGCCCTCTCCGAAGAACGCAGCCGACGGTATCGCCGACGGCTT
GGACCGCCTAATGCGGGACGTGGACGGTAACGAGCAGCAGCCGCCGCTGG
TGGCCAGAGGGTTCGCGAACGGCGGTGCAGTCACCGCCACCGAGGCCTTC
CTTCCCTCGGAGCCCGCCAACTCGCACTCGGCGCAGGCCAGTCAGGGAGG
TGGTGCATCAGCAGGAGTAGCAGCAGCGAGGGCTCCTACAGCTTCCACTG
ATTATCCTACTTCACCTGCGCGGGCAGCAACCGCAACCGTACCGGCCAAG
CCGTACGAGCCGCAGGCCCGAGGAAGCCTAATGGTGTCACCGCCGACCTC
GTCATCGGGGGGGCCTGGAGCGGCGGTGGCGACAGTAGAGCCCGCGAAAG
AGGCACCGGGGTCGCCTGTGGTCCGGCTGACTTCCTCTAAGTCGCCCCCT
CCGCCCCGCGCCCGGAAGGGCGGCGCCAAGAAGATGGGCGCGAGAAAGCT
CGGCGCGATGAAGATCGCCAGTGGTGGAGAGGTCGTGAACCTGTCGGGCT
TCGAGAGCTTCACCCCGGCGGCGGCTGCGGCAGGGGACGGGGTAGAGGAT
GCCGACCTCGCGCTCGCCCGCAAGCTGCAGGAGGAGGAGGACCTGGCGGC
CGCGGTGGCGGTTCCATCTTCCCGCCTCGCGGCCGTGGCATCGGCGGCGC
TTGTGCCTGAGGCGAGCAGGAGCAAGGCTGGGGCTGCAACCAGCGCCGGC
GGGTCGATCTACCGCTCCGCGAACGATTCCTCGTCATCTTCCATCGCCTC
GGGCGGTGGGACGGGCGGGGCGTACGGGTACCGAAATGGTTCCAGCGGCG
GCGGCGGAGGTTACAACAACGAGAGAAGCTACGGCGGCGGGGCAGGAGGG
GGCGCCGGCGCCGGCGGGTCTTCCTCCTTCGACAAAGACAAGTACAAGAA
CGCCAAGGGCATCGGGTCGGACATGCTGTTCGGGGCCAAGGACGATGACC
CCGAGGAGCAGGTGCGCAGGAAGATGAAGGTGCAGGAGTACAGCCACTCG
GCCGCCATCAGCAGCGACATGTACTTCGACAGAGAGCGGCCGGGCGGCGG
CGGCGGGTACGACGACCGCGGCGGCGGGGTGGGCATCGGGGACATGGCGG
ACCATATCGCTTCGTCGGCGGCGGCGGAGCTCAAGGGCGCCGCGGAGGCG
GCGGGAAAGCTCAAGGTGATGGCCGACCCCATCGTCGAGACTCCGCCGCC
CTCTCCGAAGAACGCAGCCGACGGTATCGCCGACGGCTTGGACCGCCTAA
TGCGGGACGTGGACGGTAACGAGCAGCAGCCGCCGCTGGTGGCCAGAGGG
TTCGCGAACGGCGGTGCAGTCACCGCCACCGAGGCCTTCCTTCCCTCGGA
GCCCGCCAACTCGCACTCGGCGCAGGCCAGTCAGGGAGGTGGTGCATCAG
CAGGAGTAGCAGCAGCGAGGGCTCCTACAGCTTCCACTGATTATCCTACT
TCACCTGCGCGGGCAGCAACCGCAACCGTACCGGCCAAGCCGTACGAGCC
GCAGGCCCGAGGAAGCCTAATGGTGTCACCGCCGACCTCGTCATCGGGGG
GGCCTGGAGCGGCGGTGGCGACAGTAGAGCCCGCGAAAGAGGCACCGGGG
TCGCCTGTGGTCCGGCTGACTTCCTCTAAGTCGCCCCCTCCGCCCCGCGC
CCGGAAGGGCGGCGCCAAGAAGATGGGCGCGAGAAAGCTCGGCGCGATGA
AGATCGCCAGTGGTGGAGAGGTCGTGAACCTGTCGGGCTTCGAGAGCTTC
ACCCCGGCGGCGGCTGCGGCAGGGGACGGGGTAGAGGATGCCGACCTCGC
GCTCGCCCGCAAGCTGCAGGAGGAGGAGGACCTGGCGGCCGCGGTGGCGG
TTCCATCTTCCCGCCTCGCGGCCGTGGCATCGGCGGCGCTTGTGCCTGAG
GCGAGCAGGAGCAAGGCTGGGGCTGCAACCAGCGCCGGCGGGTCGATCTA
CCGCTCCGCGAACGATTCCTCGTCATCTTCCATCGCCTCGGGCGGTGGGA
CGGGCGGGGCGTACGGGTACCGAAATGGTTCCAGCGGCGGCGGCGGAGGT
TACAACAACGAGAGAAGCTACGGCGGCGGGGCAGGAGGGGGCGCCGGCGC
CGGCGGGTCTTCCTCCTTCGACAAAGACAAGTACAAGAACGCCAAGGGCA
TCGGGTCGGACATGCTGTTCGGGGCCAAGGACGATGACCCCGAGGAGCAG
GTGCGCAGGAAGATGAAGGTGCAGGAGTACAGCCACTCGGCCGCCATCAG
CAGCGACATGTACTTCGACAGAGAGCGGCCGGGCGGCGGCGGCGGGTACG
ACGACCGCGGCGGCGGGGTGGGCATCGGGGACATGGCGGACCATATCGCT
TCGTCGGCGGCGGCGGAGCTCAAGGGCGCCGCGGAGGCGGCGGGAAAGCT
CAAGGAGATGACCATGGACTTCTTCGAGAACATGGTAGGCTGAGAGATGA
CCATGGACTTCTTCGAGAACATGGTAGGCTGA back to top
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