prot_P-fluviatile_contig13.1944.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1944.1
Unique Nameprot_P-fluviatile_contig13.1944.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length547
Homology
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A6H5KF81_9PHAE (Arf-GAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF81_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 3.030e-139
Identity = 390/573 (68.06%), Postives = 412/573 (71.90%), Query Frame = 0
Query:    1 MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK-NAADGIADGLDRLMRDVDGNEQQPPLVARGFANGG---------------AVTATEAFLPSEPANSHSAQASQGGGASAGVAAARAPTASTDYPTSPARAATATVPAKPYEPQARGSLMVSPPTSSSGGPGAAVATVEPAKEAPGSPVVRLTSSKSPPPPRARKGGAKXMXXXXXXXXXIASGGEVVNLSGFESFTPAAAAAGDGVE--------DADLALARKLQEEEDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFDKDKYKNAKGIGSDMLFGAKDDDPEEQVRRKMKVQEYSHSAAISSDMYFDRERPGGGGGYDDRGGGVGIGDMADHIASSAAAELKGAAEAAGKLKEMT---MDFFENMVG 546
            MQDQYLP DVVKSTFRRLRSKPDNK+CFDC TRNPTWAS TYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEME MKRGGNGNARSFFRSHG+TDMEKSEQKYHSRAA MYRAHLKK MADP V TPP SP+ +  D +ADGLDRLM D+DG +      A+GF NGG               A  A   F  + P +SH A  + G  A+ G AAA       D P  PA       P KPYEP+ RGSL VSPPT+    P AA   V+  K    +PVVRL SSKSPP PR RKGGAK MXXXXXXXXX  SGG  V LSGFE  T A                 DADLALARKL      XXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SFDK KYKN KGIGSDMLFGAKDDDP+EQ RR MK QEYS SAAISSDMY             D  GGVG GDMAD IA+SAAA+      AAGKLK+MT   +D  +NMVG
Sbjct:    1 MQDQYLPPDVVKSTFRRLRSKPDNKVCFDCPTRNPTWASATYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEVMKRGGNGNARSFFRSHGVTDMEKSEQKYHSRAAQMYRAHLKKAMADPGVVTPPQSPREDPVDNVADGLDRLMEDMDG-KPAASAPAKGFTNGGXXXXXXXXXXXPSVDAAAAAAKFAQAFP-SSHPAAPTSGSAAAGGHAAA-------DVPAPPA------APVKPYEPKPRGSLSVSPPTA----PAAAAGAVDEPKA---TPVVRLISSKSPP-PRIRKGGAKKMXXXXXXXXXXXSGGAAVKLSGFEDTTTAXXXXXXXXXXXXXXXXXDADLALARKLXXXX--XXXXXXXXXXXRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFDKGKYKNVKGIGSDMLFGAKDDDPDEQARRAMKNQEYSQSAAISSDMYXXXXXXXXXXXXYD--GGVGFGDMADQIAASAAAQ------AAGKLKDMTKGFLDDLQNMVG 540          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A835YU03_9STRA (Arf-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU03_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.920e-60
Identity = 100/160 (62.50%), Postives = 127/160 (79.38%), Query Frame = 0
Query:    5 YLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK--NAADG--------IADGLDRLMRDVD 154
            Y+  D+VKSTFRRL++  DNK+CFDC TRNPTWASVTYGIF+CYDCSAVHRNMGVH+TFVRS+ELDKW+  E+++MKRGGN  AR++F+SHG++DM K++ KY SRAA  YRAHLK+++A    ETP P+    N+A G        IA GLDR+MRD++
Sbjct:    7 YVEADLVKSTFRRLQAHRDNKVCFDCPTRNPTWASVTYGIFLCYDCSAVHRNMGVHITFVRSVELDKWRQWELDSMKRGGNAAARAYFQSHGVSDMGKTDAKYRSRAAEAYRAHLKQLIA----ETPDPAADVWNSAHGARDADEAAIACGLDRIMRDIE 162          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S2SFF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF1_9STRA)

HSP 1 Score: 171 bits (432), Expect = 9.150e-46
Identity = 84/162 (51.85%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    6 LPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME-KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAAD-----GIADGLDRLMRD-VDGNEQQP 160
            +P +   S F+RL++K DN+ICFDC TRNPTWAS T+G+F+C DCSA HR MGVHVTFVRS+ELD+W   ++  M+ GGNGNA +FFRSHG+ D+  K+E+KY S AA  Y+ HLKK     ++E  PP P    D     G  D LD +  D +D  E+ P
Sbjct:   16 VPSEAKTSFFKRLKAKRDNRICFDCPTRNPTWASATFGVFLCLDCSAAHRRMGVHVTFVRSVELDEWTEKQLRTMEVGGNGNAAAFFRSHGVRDLHIKTEEKYQSSAARHYKNHLKK-----LLEEAPPKPIETQDVGAKTGATDPLDDMFADEMDAQEEAP 172          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A4D9D0S2_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0S2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.570e-45
Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 0
Query:   13 STFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIV------ETPPPSPKNAADGIADGLDRLMRDVDGNEQQP 160
            + F+R++S+P+N++CFDC TRNPTWAS TYG+FICY+CSA HR +GVH+TFVRS++LD+W P ++  M+ GGN NA  FFR HG+T   K EQKY SRAA +Y+AHL K++AD I+      E PPP+   AA G   GLD LM      E  P
Sbjct:   12 AAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCSATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGGKVEQKYSSRAAELYKAHLSKLVADKILMDANALEPPPPTDTVAAVGC--GLDNLMLSYQEPEDVP 163          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S2B6H1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6H1_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.660e-45
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    1 MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME-KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAADGIADGLDRLMRDVDGNEQQ----PPLVAR 165
            M  +Y+ ++V  S F++LR+K  NK+CFDC +RNPTWAS T+GIFIC DCSA HR MGVH+TFVRS+ELD+W P +++ MK GGN NA +FFRSHG+ DM  K EQKY S AA  Y+ HLKK+M+   VE  P  P+      +  +D L+ DV G E       PLV R
Sbjct:    1 MNGKYVTQEVKNSAFKKLRTKGANKVCFDCSSRNPTWASATFGIFICLDCSASHRRMGVHITFVRSVELDEWTPDQLKMMKVGGNENAGTFFRSHGVRDMHIKHEQKYVSSAARQYKNHLKKLMSTEDVEEVPEEPQRKP---SVDIDSLLLDVQGVEPMLTPPKPLVGR 167          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A1D6GD40_MAIZE (ADP-ribosylation factor GTPase-activating protein AGD10 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6GD40_MAIZE)

HSP 1 Score: 152 bits (385), Expect = 1.530e-40
Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    3 DQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKK 121
            D Y  ++ +   FRRL++KP+NK+CFDC  +NPTWASVTYGIF+C DCSAVHR++GVH+TFVRS  LD W P +++ M  GGN  A +FF+ HG TD  K E KY SRAA +YR  L K
Sbjct:   11 DAYTDKNAI---FRRLKAKPENKMCFDCNAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAFGGNNRAHAFFKQHGWTDGGKVEAKYTSRAAELYRQMLNK 126          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: K0TKZ9_THAOC (Arf-GAP domain-containing protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKZ9_THAOC)

HSP 1 Score: 152 bits (385), Expect = 6.650e-40
Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    6 LPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVM 123
            +P     + FRRL++ P NK+CFDC    PTWASVTYGIF+C DCSA HRNMGVH+TFVR+++LD+W   +++AMK GGN NAR FF  HG +DM+ S +KY+ +AA  YRA L+K++
Sbjct:   23 IPTADKNAQFRRLKNLPGNKLCFDCPATRPTWASVTYGIFLCLDCSAAHRNMGVHLTFVRAVDLDEWTQRQIDAMKIGGNENARKFFSKHGCSDMKGSNKKYNHKAARAYRAELEKLV 140          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7C9CZV2_OPUST (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CZV2_OPUST)

HSP 1 Score: 152 bits (383), Expect = 1.140e-39
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0
Query:   15 FRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVE------TPPPSPKNAADGIADG-LDRLMRDVDGNEQQPPLVA 164
            FR+L++KPDNK+CFDC  +NPTWASVTYGIF+C DCSAVHR++GVH++FVRS  LD W P +++ M  GGN  A  FF+ HG TD  K E KY SRAA +YR  L K +A   V+      +P  SPK A+D  +D  +    ++    ++ P L A
Sbjct:   13 FRKLKAKPDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKTMCFGGNSRAHIFFKQHGWTDGGKIEAKYTSRAAELYRQILAKEVAKSSVDESSLPSSPAHSPK-ASDRFSDASISEAQKESLAQKETPELPA 168          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S1CBA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.680e-39
Identity = 75/154 (48.70%), Postives = 102/154 (66.23%), Query Frame = 0
Query:    5 YLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDME--KSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPK--NAADGIA-DGLDRLMRDV 153
            YL ++       RLR+ P N +CFDC  RNP+WAS T+G+FIC  CSA HR MGVH++FVRS +LDKW P +ME M+ GGN NA  FF++ G +D    K E+KYHSRAA++Y+ HL++++      + P SP+  +A +G   DGLD L   V
Sbjct:    1 YLTKEETVRKMARLRALPGNNVCFDCGARNPSWASATFGVFICIGCSATHRRMGVHISFVRSCDLDKWTPDQMELMRIGGNANAAKFFKTKGWSDATGGKHEEKYHSRAANLYKQHLQRLVQ---TSSTPASPEAASAPEGFTIDGLDDLELSV 151          
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Match: A0A7S3Y2V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2V3_HETAK)

HSP 1 Score: 159 bits (402), Expect = 4.330e-39
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 0
Query:   23 DNKICFDCRTRNPTWASVTYGIFICYDCSAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDMEKSEQKYHSRAAHMYRAHLKKVMADPIVE----TPPPSPKNAADGIADGLDRLMRDVDGNEQQPPLVARGFANGGAVTATEAFLPSEPANSHSA 190
            +N+ CFDC TRNPTWAS TYGIFICYDCS+VHRNMGVH+TFVRS +LD+W+P ++E MK GGNGNA+ +FR HG T  E  E+KY  R A MY+ HL K++   + E     P P  K   DG  DGLD L+  +         +    ++     A    +P+ PA+ H+A
Sbjct:    4 ENRTCFDCPTRNPTWASATYGIFICYDCSSVHRNMGVHITFVRSCDLDEWRPDQLERMKLGGNGNAKLYFRQHGNTGKE-GERKYTHRVAQMYKTHLDKLVNQKLSEGNNIEPEPEFKQN-DGSVDGLDALLMGLGSPRNNGDSLIIKKSSSDPQLAEHTPIPAAPASMHAA 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF81_9PHAE3.030e-13968.06Arf-GAP domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YU03_9STRA2.920e-6062.50Arf-GAP domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2SFF1_9STRA9.150e-4651.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D0S2_9STRA1.570e-4554.55Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A7S2B6H1_9STRA1.660e-4552.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1D6GD40_MAIZE1.530e-4057.98ADP-ribosylation factor GTPase-activating protein ... [more]
K0TKZ9_THAOC6.650e-4056.78Arf-GAP domain-containing protein (Fragment) n=2 T... [more]
A0A7C9CZV2_OPUST1.140e-3949.68Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S1CBA6_9STRA3.680e-3948.70Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3Y2V3_HETAK4.330e-3948.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 24..43
score: 51.03
coord: 43..60
score: 55.56
coord: 64..85
score: 40.28
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 12..129
e-value: 5.5E-45
score: 165.5
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 13..116
e-value: 1.2E-34
score: 118.9
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 12..116
score: 26.142
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 3..132
e-value: 1.0E-48
score: 166.8
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 12..542
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 12..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:3015167..3020549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1944.1mRNA_P-fluviatile_contig13.1944.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 3013663..3020549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1944.1 ID=prot_P-fluviatile_contig13.1944.1|Name=mRNA_P-fluviatile_contig13.1944.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=547bp
MQDQYLPEDVVKSTFRRLRSKPDNKICFDCRTRNPTWASVTYGIFICYDC
SAVHRNMGVHVTFVRSIELDKWKPSEMEAMKRGGNGNARSFFRSHGITDM
EKSEQKYHSRAAHMYRAHLKKVMADPIVETPPPSPKNAADGIADGLDRLM
RDVDGNEQQPPLVARGFANGGAVTATEAFLPSEPANSHSAQASQGGGASA
GVAAARAPTASTDYPTSPARAATATVPAKPYEPQARGSLMVSPPTSSSGG
PGAAVATVEPAKEAPGSPVVRLTSSKSPPPPRARKGGAKKMGARKLGAMK
IASGGEVVNLSGFESFTPAAAAAGDGVEDADLALARKLQEEEDLAAAVAV
PSSRLAAVASAALVPEASRSKAGAATSAGGSIYRSANDSSSSSIASGGGT
GGAYGYRNGSSGGGGGYNNERSYGGGAGGGAGAGGSSSFDKDKYKNAKGI
GSDMLFGAKDDDPEEQVRRKMKVQEYSHSAAISSDMYFDRERPGGGGGYD
DRGGGVGIGDMADHIASSAAAELKGAAEAAGKLKEMTMDFFENMVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO