mRNA_P-fluviatile_contig13.1934.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Match: D8LT62_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT62_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 3.290e-167 Identity = 419/679 (61.71%), Postives = 466/679 (68.63%), Query Frame = 1
Query: 1 MASIVRLPDDEVARVLDNGSNEANLQDKFVGDDAVRRISDALSSDYSKTRVLLDRNCINADGAAALGDMLKVNQSITFLSLEWNNIGAFDQGMARXXXXXXXXXXXXXXXLCNNHVNAQGATYLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKVDDFIQENINAALSDRESGALVKTALWDELHVSRGKAEQLEAQLRRQAIEEESHKRLDREREKKWQEDLTTAKQDFGRHRLDFERQMAASAKQMAELEEQLIHERSRGNNLDNRLERESERREAVQAELDKTKQTLLETRRDLTRQVEKLQEALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHETARAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLQVSMEEXXXXXERRVAEETQKQFDLQLAELRDRIDVVQKARDSKEAQARQNLASLEDLRLRSAAEVRDFGRELAAVGDELEECRNAARNSEGKASKLQTEVGVLQRAMEALQQRLEEAERDKRQASELHTANASKIQEQHALELKDMERRLSEVRAARDVADGSAKKSECRVSALRQTHLESLRLLEKSVGLALAEAVEVARHRGCADG 2037
M+S VRL DDEV R+L++GS +AN DKFVGD+AVR+ISDAL+S+ SKTRVLLDRNC+ ADGAAALGDMLKVN SI LSLEWNNIG D+G+ R LCNNH+ AQGA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +QE+I AALSDR+SG LVKTALWD+LHVSRGKAEQLEA+LRRQA+EEESHKRLDRERE+KW+EDL T KQD RHRLDFERQM ASAKQMAELEEQLIHERSRG++L N+LERESERREA+Q ELDKTKQTLLETRR+LTRQ E+L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LHETARAEVR XXXXXXXXXXX LARLQVS+EE E+RV E QKQFDL+LAELR+RID VQK +SKEAQ+R+ LASLEDLRLRS AE+RDFGRELAA G+ELE+ RN+ARNSEGKASKLQ ++GV QR E ELKDMERRLSE RAA A+ +AK++E RVSALRQ HL SLRLLE +VG AL +AV AR G G
Sbjct: 1 MSSTVRLADDEVDRLLNDGSTDANFADKFVGDEAVRQISDALASNCSKTRVLLDRNCVGADGAAALGDMLKVNSSIASLSLEWNNIGTCDEGLQRLADGLEVNRSLTALVLCNNHITAQGASCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLQESIQAALSDRDSGNLVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDREREQKWKEDLVTVKQDSARHRLDFERQMGASAKQMAELEEQLIHERSRGSSLGNKLERESERREAIQGELDKTKQTLLETRRELTRQTERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTTEIDASRRAATRAKAEAEQATALHETARAEVRLTAERADEAVAAVARATRDGATALEETRRMYEERVEASQADRDARVKSAEERAXXXXXXXXXXXAVRQAASKELARLQVSVEERISQNEKRVVVEAQKQFDLELAELRERIDAVQKITESKEAQSREYLASLEDLRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQADLGVQQRVTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSELKDMERRLSEARAACRAAEKTAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIGSGTG 679
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Match: A0A6H5KCD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD5_9PHAE) HSP 1 Score: 194 bits (493), Expect = 1.020e-52 Identity = 124/213 (58.22%), Postives = 145/213 (68.08%), Query Frame = 1
Query: 1399 LARLQVSMEEXXXXXERRVAEETQKQFDLQLAELRDRIDVVQKARDSKEAQARQNLASLEDLRLRSAAEVRDFGRELAAVGDELEECRNAARNSEGKASKLQTEVGVLQRAMEALQQRLEEAERDKRQASELHTANASKIQEQHALELKDMERRLSEVRAARDVADGSAKKSECRVSALRQTHLESLRLLEKSVGLALAEAVEVARHRGCADG 2037
LARLQVS+EE E+RV E QKQFDL+L ELR+RID VQ+ +SKEAQ+R+ LASLE+LRLRS AE+RDFGRELAA G+ELE+ RN+ARNSEGKASKLQ ++GV QR E L QH ELKDMERRLSE RAA A+ +AK++E RVSALRQ HL SLRLLE +VG AL +AV AR G G
Sbjct: 103 LARLQVSVEERLAQNEKRVVAEAQKQFDLELVELRERIDAVQRITESKEAQSREYLASLEELRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQADLGVQQRVAEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXQHGSELKDMERRLSEARAACRAAEKNAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIGSGTG 315
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Match: A0A836CKE5_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE5_9STRA) HSP 1 Score: 166 bits (420), Expect = 7.970e-40 Identity = 280/701 (39.94%), Postives = 369/701 (52.64%), Query Frame = 1
Query: 49 DNGSNEANLQDKFVGDDAVRRISDALS-SDYSKTRVLLDRNCINADGAAALGDMLKVNQSITFLSLEWNNIGAFDQGMARXXXXXXXXXXXXXXXLCNNHVNAQGATYLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNK----------------------------------------VDDFIQENINAALSDRESGALVKTALWDELHVSRGKAEQLEAQLRRQAIEEESHKRLDREREKKWQEDLTT--AKQDFGRHRLDFERQMAASAKQMAELEEQLIHERSRGNNLDNRLERESERREAVQAELDKTKQTLLETRRDLTRQVEKLQEALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHETARAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLQVSMEEXXXXXERRVAEETQKQFDLQLAELRDRIDVVQKARDSKEAQARQNLASLEDLRLRSAAEVRDFGRELAAVGDELEECRNAARNSEGKASKLQTEVGVLQRAMEALQQRLEEAERDKRQASELHTANASKIQEQHALELKDMERRLSEVRAARDVADGSAKKSECRVSALRQTHLESLRLLEKSVGLALAEAVEVARHR 2022
D +E NL D + + V+ I+D+L +D ++ ++L + ++A+GAAAL D L+VN SIT +SLEWN+IG F+ G+ XXXXXXXXXXXXXXX NN ++ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NK VD + ENI A L+DR + + A D+LHV+R +AEQLEA+LRR A +E + + + ERE++W +L A+ G R Q A EQ E +R + LD L E +Q ELD+ L + L ++LQ +LD TA AEVR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LARLQV +EE ER V +E + ++D ++ EL +RI+ VQK R+ +E + + A L+ R +SAAE+R+ +EL D+L+ R +R +EGKA+KL T+VGVLQR E LQ + + ERD++ +E H + K+Q QHA E++ +ER+L E RAA +G ++A R H +L +L+KS+ +LAEA E AR R
Sbjct: 28 DYDQDELNLSDTILNEADVQHIADSLRHTDCTQHALILRGSQVSAEGAAALADALRVNDSITTVSLEWNSIGLFESGLEXXXXXXXXXXXXXXXXXRNNCISPAGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAGNKAMLCLTIVLPQICHWWTPHEKRNQRSATVPALHFVTPLLKVDPMLLENIEALLNDRGAAGELALATRDDLHVARERAEQLEARLRRTAADEAALRSKEAEREREWHAELARIHAETKRGLERQVERLQAAVDGANEDRRSEQRQSELARSS-LDKELAETVEEARRLQTELDRA----LRNGKRLQTLTDQLQASLD------------------------------------------------------------TAHAEVRLLHERVDEHAALAARAASEGRAAVEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRELARLQVLLEEKVAEAERSVRDEQRNRYDAEVKELVERIESVQKMRELQEGELKGLTAQLDAQRSQSAAELRELNKELLRYRDQLDAAREGSRAAEGKAAKLSTDVGVLQRKAEVLQSKCDSLERDRQHTAEAHQGSTDKLQAQHASEVRALERQLQEARAAISALEGKLTDCAEEMAAARAQHTRTLGVLDKSIAQSLAEAFEAARAR 663
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Match: A0A7S1TX40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX40_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 8.180e-6 Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 109 RISDALSSDYSKTRVLLDRNCINADGAAALGDMLKVNQSITFLSLEWNNIGAFDQGMA 282
++++ L D + T ++L N I A+G AL DMLK+N+S+ +SLEWNNIG + GMA
Sbjct: 11 KVAERLKGDGTITSLVLRGNNIGAEGTVALADMLKMNRSLQQVSLEWNNIGFSEHGMA 68
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Match: A0A6J0VF87_9SAUR (leucine-rich repeat-containing protein 45 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0VF87_9SAUR) HSP 1 Score: 59.3 bits (142), Expect = 2.110e-5 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 64 EANLQDKFVGDDAVRRISDALSSDYSKTRVLLDRNCINADGAAALGDMLKVNQSITFLSLEWNNIGAFDQGMARXXXXXXXXXXXXXXXLCNNHVNAQGATYLARA 381
E L D + ++ + + L S+ + L N + A GA ALG +L+ N+SI L+LEWNN+G +++ AR L NN +N QGA LA A
Sbjct: 68 EITLSDCMLSEEGAKLLLHGLCSNTVVKALDLKGNNLRAVGAEALGKLLRQNKSIRSLTLEWNNLGIWEESFARFCEGLGANAQLQHVDLRNNQINHQGAGDLAMA 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1934.1 >prot_P-fluviatile_contig13.1934.1 ID=prot_P-fluviatile_contig13.1934.1|Name=mRNA_P-fluviatile_contig13.1934.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=689bp MASIVRLPDDEVARVLDNGSNEANLQDKFVGDDAVRRISDALSSDYSKTRback to top mRNA from alignment at P-fluviatile_contig13:2943996..2951303- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1934.1 ID=mRNA_P-fluviatile_contig13.1934.1|Name=mRNA_P-fluviatile_contig13.1934.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7308bp|location=Sequence derived from alignment at P-fluviatile_contig13:2943996..2951303- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2943996..2951303- >mRNA_P-fluviatile_contig13.1934.1 ID=mRNA_P-fluviatile_contig13.1934.1|Name=mRNA_P-fluviatile_contig13.1934.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4134bp|location=Sequence derived from alignment at P-fluviatile_contig13:2943996..2951303- (Porterinema fluviatile SAG_2381)back to top |