mRNA_P-fluviatile_contig13.1905.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1905.1
Unique NamemRNA_P-fluviatile_contig13.1905.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 7.030e-127
Identity = 198/246 (80.49%), Postives = 212/246 (86.18%), Query Frame = 3 
Query:  882 QQLGAGLRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYSGKGLLGALGCAAVLTLANSVVLARATFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVLGALGAAGVFRVLGLGRCELRPWLF 1619
            ++LGAGLRPR SYH SRK FHFSTIMAFA VYSAKLP+ DFARGMAALD CVL  ELARLR++ +NR L RVFGAFMR HELKKFSGIMYCLAGLGITSA+FPKHIALLGMLQLALGDPVAAL GHATRSVGWSRV  +GKGLLGALGCA  LTLANS VLA+A F+   P    L R+VLA GMIAAW+  VEVSVPSPQKTLPC+GFPLA DDNA LPVLGA+GAA VFRVLGLG CELRPWLF
Sbjct:   61 KELGAGLRPRESYHISRKTFHFSTIMAFAVVYSAKLPQRDFARGMAALDACVLAGELARLRVDVVNRVLFRVFGAFMRAHELKKFSGIMYCLAGLGITSAMFPKHIALLGMLQLALGDPVAALCGHATRSVGWSRVG-TGKGLLGALGCATALTLANSFVLAKARFESGAPT---LRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWLF 302
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A6U5JUM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5JUM7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.060e-25
Identity = 99/288 (34.38%), Postives = 136/288 (47.22%), Query Frame = 3 
Query:  807 SNEIENMSLSDAVFCAPFRSPGFTTQQLGAGLRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLR--IETINRALLRVFGAFMRVHELK-KFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYS------GKGLLGALGCAAVLTLANSVVLARATFDGRVPP-PPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGF-----PLALDDNAVLPVLGALGAAGVFRVLGLGR-CELRPWLFV 1622
            SNEIEN+   D           F T      L+ R S +  RK+ H    + F  + +  +PR+ F   M  L    L  EL R R     +N AL  + G  +R HE+  KF+G +Y   G+ +TSALF K  A LG+ QLA+ DP A+ FG +TR V WSR+          KG LG LG A      N  VL  A F   VP    AL    LA GM  A++   +++VP+P   +P   F     P  +DDN V+P+     A  +F+ L       L P++F+
Sbjct:  126 SNEIENIQHIDVTINKKALKKSFKTSY-AKKLKSRNSMNLRRKVLHAGFGLFFG-ILNHVVPRKYFLGAMTILSTGTLCMELLRYRPGFSWMNDALHTILGGSLRRHEMDGKFTGSLYFFVGVTVTSALFSKAAATLGIFQLAIADPSASYFGRSTRHVYWSRIESGLGGFGRNKGFLGFLGGALACVPLNYQVLRMAQFGKIVPGGQQALLTASLALGMAGAFA---DLAVPTPALVMPEKVFGVRVPPFHVDDNFVVPIFAGFAATHIFKALSCPTDFTLAPFVFI 408
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A7S4AI34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI34_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.620e-24
Identity = 93/255 (36.47%), Postives = 130/255 (50.98%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLR--IETINRALLRVFGAFMRVHELK-KFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYS------GKGLLGALGCAAVLTLANSVVLARA------TFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLP---CDGF--PLALDDNAVLPVLGALGAAGVFRVLGLGRCEL 1604
            L+ R + +  RK  H +  M FA+++   +PR  F  GM  L    L  EL R R   + +N++L  V G  +R +E++ KF+G +Y  +G+ +TS LFPK  A LG++QLA+ DP A+ FG ATR V WSR+          KG+LG LG A      N  +L+ A      T   R    P +  + LA GM  A   L ++ VP+P  TLP   C     P  LDDN V+PVL       +     +GR EL
Sbjct:  215 LKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAGA---LADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 465
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A7S4EJ41_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EJ41_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.920e-24
Identity = 93/255 (36.47%), Postives = 130/255 (50.98%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLR--IETINRALLRVFGAFMRVHELK-KFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYS------GKGLLGALGCAAVLTLANSVVLARA------TFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLP---CDGF--PLALDDNAVLPVLGALGAAGVFRVLGLGRCEL 1604
            L+ R + +  RK  H +  M FA+++   +PR  F  GM  L    L  EL R R   + +N++L  V G  +R +E++ KF+G +Y  +G+ +TS LFPK  A LG++QLA+ DP A+ FG ATR V WSR+          KG+LG LG A      N  +L+ A      T   R    P +  + LA GM  A   L ++ VP+P  TLP   C     P  LDDN V+PVL       +     +GR EL
Sbjct:  335 LKNRNAANKRRKFMHAAWGMLFASLHHF-IPRNRFLPGMTTLTTLTLIMELLRYRKGFDWMNKSLHFVLGKALRKNEMEGKFTGSLYYFSGVTLTSYLFPKSCATLGIVQLAIADPSASYFGRATRHVYWSRINNGFFGLGRNKGILGCLGGAVSCVPLNYRLLSLALVKNTGTAAARTIAKPTVLAISLALGMAGA---LADLMVPTPSLTLPKRVCGVRVPPFHLDDNIVVPVLSGWACVYILAAASIGRNEL 585
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: UPI0019832A2B (Uncharacterized protein n=1 Tax=Cryobacterium sp. TaxID=1926290 RepID=UPI0019832A2B)

HSP 1 Score: 87.4 bits (215), Expect = 1.210e-15
Identity = 75/236 (31.78%), Postives = 108/236 (45.76%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFG--HATRSVGWSRVRYSGKGLLGA----LGCAAVLTLANSVVLARATFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVLGALGAAGVFRVLGL 1589
            L  R+  H +RK +H    +    VY A L R      +       L AE ARLRI  IN   +RV+G  MR  E+ +FSG  Y +A   I   +FPK IA L +  LA+GDP+A+LFG  +  RS+ +S    +GK L+G     L C  V  L   V+      + R      +  +VL + + A   G  E+              P+ +DDN  +PV+        F V+G+
Sbjct:   19 LHVRSDLHLARKAWHTLMGLFIVAVYMAGLTRSQGVLVLGGFLAFTLAAEGARLRIPAINEIFMRVWGPLMRSCEVNRFSGTPYYIASALIAVGIFPKPIAALSIAFLAVGDPIASLFGILYGDRSIRFS----NGKSLIGTAAGMLACGLVAFLFLQVMNQSQFLELR------MDHLVLLSVVGAFAGGGAEL-------------LPMEVDDNFAIPVVSGFVLWLAFIVMGV 231
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: UPI001989E47C (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=UPI001989E47C)

HSP 1 Score: 86.3 bits (212), Expect = 2.200e-15
Identity = 70/230 (30.43%), Postives = 108/230 (46.96%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYSGKGLLGALGCAAVLTLANSVVLARATFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVLGALGAAGVFRVLGL 1589
            LR R   H +RK++H    +  A  Y    P+      + A     L AE ARLR   +N   +RV G  MR HE+ K SG  + +A + ++ A+FPK IA+L +L LA+GDPV+++FG         R   +GK L+G    AA + + + +        G VP  P+   + LA G+    + ++                PL +DDN  +P++  L     F V G+
Sbjct:   13 LRLRNDLHLARKVWHCGMGVFMAVFYGIGFPKVVCVLLLIAALSFFLTAEYARLRFPKLNAFAIRVMGPVMRKHEVSKMSGTPFYIASVLLSVAIFPKPIAILSILFLAIGDPVSSIFGITYGDRIGMRFA-NGKSLIGT---AAGMGICSVITFVYLMLTG-VPLVPS-SSIALAGGLAGGGAEMI----------------PLDIDDNFSIPLVSGLALWIAFLVFGV 220
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A3D3GDR7_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium TaxID=2053517 RepID=A0A3D3GDR7_9PROT)

HSP 1 Score: 84.0 bits (206), Expect = 1.690e-14
Identity = 77/253 (30.43%), Postives = 112/253 (44.27%), Query Frame = 3 
Query:  834 SDAVFCAPFRSPGFTTQQLGAGLRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYS-GKGLLGALGCAAVLTLANSVVLARATFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVLGALGAAGVFRVLGL 1589
            S+A+   PFR            L  R   H +RK+FH  T MA A  Y A +P       ++++   V   E ARLRI   N  ++R F   +R HE ++ + I   L    I   +FPK IA+L +L LA GDP+A++FG      G   +R++ GK L+G+L  A +LT A    +          P PAL  V +  G+    + +  V V                DDN  +PV+        F V G+
Sbjct:   14 SEALAAFPFR------------LHVRTDLHLTRKVFHMLTGMAIAFSYLAGVPAPTLVIVLSSILGFVFMIETARLRIPAFNEKMIRFFSPIIRSHECEQPTAIPPYLLSAVIAVLVFPKPIAILSILFLACGDPLASVFGIL---YGKHSIRFANGKSLIGSL--AGILTCAAITFMFLKMMS---IPMPALLAVTMIGGLAGGTAEMAPVDV----------------DDNFSIPVISGFVLWLAFIVFGV 230
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A4Q6C3G7_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6C3G7_9PROT)

HSP 1 Score: 79.3 bits (194), Expect = 9.160e-13
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHATRSVGWSRVRYS-GKGLLGALG--CAAVLTLANSVVL 1364
            L+ R   H +RK++H    M     Y   L R      +A   +  LG EL RL+   +N  +++ +G  MR  E+ + SGI Y +    I+  +FPK IA+L ++ LA+GDP+A+LFG    ++G   VR+S GK L+G +    A  L +A S++L
Sbjct:   30 LKLRNDLHLARKIWHCGMGMIMMASYFFWLTRAQAMMWLATAFLFNLGMELGRLKSPELNAHIMKTWGGIMRSCEVNRVSGIPYYIGATLISVTIFPKPIAILSVVCLAVGDPIASLFGI---TLGDKSVRFSNGKSLIGTMAGVIACSLVIAASLLL 184
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A1F3Y983_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium RIFOXYD1_FULL_55_31 TaxID=1797404 RepID=A0A1F3Y983_9PROT)

HSP 1 Score: 71.2 bits (173), Expect = 4.130e-10
Identity = 63/221 (28.51%), Postives = 97/221 (43.89%), Query Frame = 3 
Query:  900 LRPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCV---LGAELARLRIETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFG--HATRSVGWSRVRYSGKGLLGALGCAAVLTLANSVVLARATFDGRVPPPPALGRVVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVL 1547
            L  R+  H  RK++H +     A +Y   L       GM  +   +   L  E ARLRI  +NR +L+++  FMR HE    S +   L    I  A+FPK +A+L +L LA GDP+A+LFG  +  RS+        GK L+G         L +   L   +F     P  ++  + +  G+    + L+ + V                DDN  +PV+
Sbjct:   29 LHLRSELHIVRKIWHLTMGSLIAFIYL--LSGMSSTAGMTIIGSLLAISLIVETARLRIPALNRRVLKIWAPFMRAHECSGPSAVPPYLLSTLIAIAIFPKPVAVLSILYLAYGDPIASLFGILYGDRSIRLP----GGKSLIGTAAGTITCILVSFAFLKMLSF-----PDSSILAISVLGGLAGGTAELMPIDV----------------DDNLSIPVI 222
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BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Match: A0A7S0MSC3_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MSC3_9CRYP)

HSP 1 Score: 70.1 bits (170), Expect = 1.530e-9
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 3 
Query:  903 RPRASYHFSRKMFHFSTIMAFATVYSAKLPREDFARGMAALDMCVLGAELARLRI-ETINRALLRVFGAFMRVHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFG 1256
            + R   H  RK FH  T M FA +Y   L ++       AL + +   E  R+R   TINR  LRV  + +R +E    SG+++ +AG+       PK++A+L +L L++GDPVA+  G
Sbjct:   35 KSRTQLHLLRKFFHALTGMGFAALYEYFLTQQQTLIFYGALFVVLAAGESLRMRFPNTINRLALRVTQSLLRSYEKDHASGMVFFVAGMLFCVGFLPKNVAVLSILYLSIGDPVASACG 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LS95_ECTSI7.030e-12780.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U5JUM7_9STRA1.060e-2534.38Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4AI34_9STRA2.620e-2436.47Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4EJ41_9STRA6.920e-2436.47Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
UPI0019832A2B1.210e-1531.78Uncharacterized protein n=1 Tax=Cryobacterium sp. ... [more]
UPI001989E47C2.200e-1530.43Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]
A0A3D3GDR7_9PROT1.690e-1430.43Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]
A0A4Q6C3G7_9PROT9.160e-1334.81Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A1F3Y983_9PROT4.130e-1028.51Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]
A0A7S0MSC3_9CRYP1.530e-935.29Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2766582..2770829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.2
Seed ortholog evalue9.3e-106
Seed eggNOG ortholog2880.D8LS95
EggNOG OGs2E1KA@1,2S8X1@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_004350.1
Exons4
Model size2187
Cds size960
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1905.1prot_P-fluviatile_contig13.1905.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2767247..2770267 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.1587203-UTR-P-fluviatile_contig13:2766581..27672461622815580.1587203-UTR-P-fluviatile_contig13:2766581..2767246Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2766582..2767246 +
1693562331.8113866-UTR-P-fluviatile_contig13:2766581..27672461693562331.8113866-UTR-P-fluviatile_contig13:2766581..2767246Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2766582..2767246 +
1622815580.24066-UTR-P-fluviatile_contig13:2770267..27708291622815580.24066-UTR-P-fluviatile_contig13:2770267..2770829Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2770268..2770829 +
1693562331.8574853-UTR-P-fluviatile_contig13:2770267..27708291693562331.8574853-UTR-P-fluviatile_contig13:2770267..2770829Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2770268..2770829 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.1782482-CDS-P-fluviatile_contig13:2767246..27676741622815580.1782482-CDS-P-fluviatile_contig13:2767246..2767674Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2767247..2767674 +
1693562331.820697-CDS-P-fluviatile_contig13:2767246..27676741693562331.820697-CDS-P-fluviatile_contig13:2767246..2767674Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2767247..2767674 +
1622815580.193994-CDS-P-fluviatile_contig13:2768320..27683741622815580.193994-CDS-P-fluviatile_contig13:2768320..2768374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2768321..2768374 +
1693562331.8293781-CDS-P-fluviatile_contig13:2768320..27683741693562331.8293781-CDS-P-fluviatile_contig13:2768320..2768374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2768321..2768374 +
1622815580.2095687-CDS-P-fluviatile_contig13:2769053..27691811622815580.2095687-CDS-P-fluviatile_contig13:2769053..2769181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2769054..2769181 +
1693562331.8385706-CDS-P-fluviatile_contig13:2769053..27691811693562331.8385706-CDS-P-fluviatile_contig13:2769053..2769181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2769054..2769181 +
1622815580.2280927-CDS-P-fluviatile_contig13:2769917..27702671622815580.2280927-CDS-P-fluviatile_contig13:2769917..2770267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2769918..2770267 +
1693562331.8484325-CDS-P-fluviatile_contig13:2769917..27702671693562331.8484325-CDS-P-fluviatile_contig13:2769917..2770267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2769918..2770267 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1905.1

>prot_P-fluviatile_contig13.1905.1 ID=prot_P-fluviatile_contig13.1905.1|Name=mRNA_P-fluviatile_contig13.1905.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=320bp
MSIPHVISDFSELPNNDIIETTTGWRPRTLLVTSYHCLKILPFIHWLSNE
IENMSLSDAVFCAPFRSPGFTTQQLGAGLRPRASYHFSRKMFHFSTIMAF
ATVYSAKLPREDFARGMAALDMCVLGAELARLRIETINRALLRVFGAFMR
VHELKKFSGIMYCLAGLGITSALFPKHIALLGMLQLALGDPVAALFGHAT
RSVGWSRVRYSGKGLLGALGCAAVLTLANSVVLARATFDGRVPPPPALGR
VVLAAGMIAAWSGLVEVSVPSPQKTLPCDGFPLALDDNAVLPVLGALGAA
GVFRVLGLGRCELRPWLFV*
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mRNA from alignment at P-fluviatile_contig13:2766582..2770829+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1905.1 ID=mRNA_P-fluviatile_contig13.1905.1|Name=mRNA_P-fluviatile_contig13.1905.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4248bp|location=Sequence derived from alignment at P-fluviatile_contig13:2766582..2770829+ (Porterinema fluviatile SAG_2381)
CGAAGGCCTGTAAACATTCCCGTTTCAATACAACCTCGGCTGGATGCGCG
CGGGGGAGCAGCCAGCAAGGAGGTCCCAACAGAGGTGCGGCGTAGGGCTA
ACTGCCTGGTGAGGGCATGGAAAAGTCATAAAGCTGATTGTCCGTTCTCC
ATAAATTAATTTAGTGTGTATTGCTACACAATACCCGTAGAAACCCGCTT
TGTTCTGTCCATCATGTGTCGGTTGGGTACGAGTGTGGTATGCACTTATC
ATGTTCAGCACCGACAAACGGCCGAGTACGTTGCTCGTCTGCCAACAGAC
CGCTCTACAGTATGGAGCACCGTCCCTGGAATACTACGGGTTTTATCTTT
TGGGTGTTAACTGTGTCCTAAAAGTAAGATATCTCCTTAGCGAAGAAACA
ATTCCCCCTCGCTTTGCCTCTGGCAAAACAGAGGGCCCCCCAACTCAAGT
GTGGAAGCTCGCGCGCTTTCCGTCTTGAGTGATGATGCCCTTTCGCGCCA
TCAGCTGCCTAATAGCAAAGAAGACGCTTCTCACCTCTCACACTGGTACC
CACAACCATGGTGTTTGCTGTTCTCCTGCACAATCCGCGCTAAGTTAGGA
AAGGGAAACGATCGCCATTGATTTCTAGAGCCACATGTTGCGCACGTGCT
TCAGCATCAACCCTGATGTCCATTCCACACGTCATTTCTGACTTTTCTGA
ACTTCCGAATAACGATATCATTGAAACCACCACGGGATGGCGACCGCGCA
CCCTGTTGGTCACGAGTTACCACTGCCTGAAAATCTTACCCTTCATCCAC
TGGCTGTCCAACGAGATAGAGAACATGTCTTTATCCGATGCTGTTTTCTG
CGCACCGTTTCGATCGCCCGGATTCACAACACAGCAGCTTGGTGCCGGAC
TCCGGCCTCGGGCGTCGTACCACTTTTCCCGTAAGATGTTTCACTTCTCG
ACCATCATGGCGTTCGCCACCGTCTACAGCGCCAAGCTTCCGCGGGAGGA
CTTCGCGCGAGGCATGGCGGCGCTAGACATGTGTGTGCTCGGGGCGGAGC
TGGCAAGGCTGCGGATCGAGACTATCAACAGAGCACTGCTGCGGTGAGGC
CTTGCAGATGTCGCGTGCAGCCCATTCCACAGCGTCGTGATTCTCGATGC
GTACAGCGTTCAAGCTCCAAAGCGACAAGATCGCCAGCAGACCGGAGCCG
AGGAATCACTCACTTCAGATACCTGCTAAGGTTGCACGCGAGTTCGCCCC
TAGTAAGTATGCCCAAAAGACAGGAAGACGGCGATCTGGATCGGGCAGGG
CGTGGTTGTGGAAACATTACGCGAATGGTTGAAGTATGGAGGCGAAAACA
TTTTGAACCATCGTGCGCCCGTCTCAAACAGAAGTTCTACCTTCAGGGTA
CAGTTTTGGAAACGAAAGGTTATAAACGCATTGGCCGGGGCCTTGTGTCC
CCACTAATCAACATGTGTTCGAGTCACTCGTTTTGTCGATAGGCGATTTC
CGAAGGCAAAAACTTGTAAACTACAAATTGAATGGACTCGAGTCGTTATG
CATGAATTTTTCAAGCCGCGGATGAAATGCGATCACGATAGCGCATCTTC
GTCGCAGAGGGAAACTGCTCTGATCGAATCAACGCCACTTCCCGGAGCTG
GCAGACATCGTTTGCCTAATAGCCGCGTGTTGCCACCAAAGCTTGCTTCG
TCCATCGACTGCCGCACGCATTCGATTGCTGCGGCGCAGGGTCTTCGGCG
CCTTTATGAGAGTACACGAGCTCAAGAAATTTAGCGGGATCATGTGAGTG
ATGGCCATTCGTTTGCGGAAGCGTCATGTACGTCTCTCGGTTGCGTACGA
AAACTTCGCAATCCACCGATGCCTGTATTGCGTGCTGTTTGCCGCCGTGG
CAAACACACATGGGAGTGCCGGAAATACACCGTAGAGATCCCTAGTGTAA
GGGTTAGGATTGGGGTCAGGGTTAGACCATCTCAATGTCCAGACAATGAA
CCAATCGGTGGTACTTGTTCACCGCTCAAAACTAAACTGTGCAGCGCGTT
CTGCAAGATCTCGTCGTATCATGGTTTGCGAAAGAAACCCTAGCTTATTG
TGAAAAGAGAGCGCAATCGACTCACAGAAGCCCAGCAATCGCTCAGCTGA
GAGGACAGCCACTAAAGACGATGCGATGATGGCTCCTTCACCACCCCTCA
CGTGCCGTCGGTGGTACCGTTTCGGTAAAAGTTCGTCAGACGTTCTTAGC
GACGGATCCCCACGTGAAAAGACCTATGTTGTCCGGTCATTGTTTCTTGC
ACACCGTGAGACACTTGTTTTCCATCACATTAGAACAGACATTCTTGTAG
TCGCTGCTCCGGCAGCGAACAATATTGGTGCTTCGGTACTGTCTGCAATA
CAGATGCCCAATTGCTGTTGCTACGGCTGCTGCCGCTACTGGTACTCGTC
TGCTGTCGCTCGTGTTCCGCAGGTACTGCCTGGCAGGGTTGGGGATAACA
TCTGCGCTATTCCCGAAGCACATCGCTCTATTGGGAATGCTCCAGCTGGC
GCTTGGTGACCCCGTGGCCGCGCTTTTCGGGCACGCGACTCGTTCTGTCG
GTAAGGTCAACTTCCACAGAGATTCCTTTCGAGGCTGTAAGTCTCGGTGC
AGAGGCCGTAGCGCTGCAGGTATAGGGGGGTGTACTCATAGTCGTGCATG
CCGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAG
CACGCCGGGTTCTCACCGGACCAGGCTCTCACACCACCAAGCGCGAAGCG
CCGTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAAG
GGTGTTCGGCATCTTGTGCTTACTTCCTTGCATGCGGATGACAGCTGCGT
ATGGGTTAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGC
ACTATGTAACTGCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTGC
GATCATCCCCCTTGCACGGAGTGAGGGTTCTCCACTCCGCACAACATGAT
CTTCTCGACCACCATTATGGTTACCGCCAAAAAAACCAGAGAAAAAAAAA
GACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAA
CGTCGTTGCCACGCGACGAAAACCCAATCCCGATGGCAAACACCGAGATG
AGAGCCAGCGGGAGGGCGGCTGCAGGTATAGGGTGCGATGGTTTAGGCAG
GGCTCGTCCCGATGCTGCCTATCTGTGTCTTCGCGCTCATTGATTTCATG
ATGCCCAAACCGCTCGTGTACATCATCATCCATCAGGTTGGTCTCGCGTG
AGGTATTCTGGAAAGGGTCTCCTGGGAGCGCTCGGCTGCGCTGCGGTCCT
GACCCTGGCCAACTCGGTCGTGCTGGCCAGGGCGACGTTCGACGGACGGG
TGCCGCCGCCGCCGGCGCTCGGCCGAGTCGTGCTCGCGGCGGGGATGATC
GCCGCGTGGTCGGGGCTGGTAGAGGTCAGCGTGCCGAGCCCCCAGAAGAC
GCTTCCTTGTGACGGTTTCCCGCTGGCGCTCGATGATAACGCTGTACTGC
CGGTGCTCGGCGCTCTTGGCGCGGCAGGGGTGTTCCGTGTCCTTGGGCTG
GGGCGCTGCGAGCTGCGACCGTGGCTGTTTGTTTGATGAGTTGAAATTCG
CGATGTGTAGTGGTAGTTTTCTGTGTTGGTTGTGCTTGGCTCATTCGGTT
CTTATGTGGCTCGATTGTGTATTCGGCCGCGTACCGTTGAGAAAATAGAC
CAGTAGATCTTTGTTTACCTTCAAATCGATCACGATGCGGTGTGAAATTT
ATTACACGGAGTACACCGCCGCTCGATCCACCATCACCTCATCGTTTGGT
AAGTGCACGAAGCCCTCCGTGCCCAAAACAAAACGGCAGTTGACCGACAT
CACTTGGCGAATTTCGACGATCTCGTTGCTTGCAAGTCGTGGTGGGGGAG
TCGGACCCGAGGGGGGGCGACAGTAGATTAGACGCGTCTGGGTCTAGACC
TTCGTCCGCCATACCACAGCTGAAGTTTCAGTGTTTTTGTCGTTCAGGGT
CCTGCCTGTGGAAGGCTCAACCTGCTGATTCAACAAACGTCTTGTGGACG
GGGGCGCCGCTTTGAAGTTTAAAACGCCTCTTCAGACTGGAGAGGCAGAT
GATAGGTCAGATGGATAGGCAAAATATCACACGGTGTACTGCAGCAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2766582..2770829+

>mRNA_P-fluviatile_contig13.1905.1 ID=mRNA_P-fluviatile_contig13.1905.1|Name=mRNA_P-fluviatile_contig13.1905.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1920bp|location=Sequence derived from alignment at P-fluviatile_contig13:2766582..2770829+ (Porterinema fluviatile SAG_2381)
ATGTCCATTCCACACGTCATTTCTGACTTTTCTGAACTTCCGAATAACGA
TATCATTGAAACCACCACGGGATGGCGACCGCGCACCCTGTTGGTCACGA
GTTACCACTGCCTGAAAATCTTACCCTTCATCCACTGGCTGTCCAACGAG
ATAGAGAACATGTCTTTATCCGATGCTGTTTTCTGCGCACCGTTTCGATC
GCCCGGATTCACAACACAGCAGCTTGGTGCCGGACTCCGGCCTCGGGCGT
CGTACCACTTTTCCCGTAAGATGTTTCACTTCTCGACCATCATGGCGTTC
GCCACCGTCTACAGCGCCAAGCTTCCGCGGGAGGACTTCGCGCGAGGCAT
GGCGGCGCTAGACATGTGTGTGCTCGGGGCGGAGCTGGCAAGGCTGCGGA
TCGAGACTATCAACAGAGCACTGCTGCGATGTCCATTCCACACGTCATTT
CTGACTTTTCTGAACTTCCGAATAACGATATCATTGAAACCACCACGGGA
TGGCGACCGCGCACCCTGTTGGTCACGAGTTACCACTGCCTGAAAATCTT
ACCCTTCATCCACTGGCTGTCCAACGAGATAGAGAACATGTCTTTATCCG
ATGCTGTTTTCTGCGCACCGTTTCGATCGCCCGGATTCACAACACAGCAG
CTTGGTGCCGGACTCCGGCCTCGGGCGTCGTACCACTTTTCCCGTAAGAT
GTTTCACTTCTCGACCATCATGGCGTTCGCCACCGTCTACAGCGCCAAGC
TTCCGCGGGAGGACTTCGCGCGAGGCATGGCGGCGCTAGACATGTGTGTG
CTCGGGGCGGAGCTGGCAAGGCTGCGGATCGAGACTATCAACAGAGCACT
GCTGCGGGTCTTCGGCGCCTTTATGAGAGTACACGAGCTCAAGAAATTTA
GCGGGATCATGGTCTTCGGCGCCTTTATGAGAGTACACGAGCTCAAGAAA
TTTAGCGGGATCATGTACTGCCTGGCAGGGTTGGGGATAACATCTGCGCT
ATTCCCGAAGCACATCGCTCTATTGGGAATGCTCCAGCTGGCGCTTGGTG
ACCCCGTGGCCGCGCTTTTCGGGCACGCGACTCGTTCTGTCGGTACTGCC
TGGCAGGGTTGGGGATAACATCTGCGCTATTCCCGAAGCACATCGCTCTA
TTGGGAATGCTCCAGCTGGCGCTTGGTGACCCCGTGGCCGCGCTTTTCGG
GCACGCGACTCGTTCTGTCGGTTGGTCTCGCGTGAGGTATTCTGGAAAGG
GTCTCCTGGGAGCGCTCGGCTGCGCTGCGGTCCTGACCCTGGCCAACTCG
GTCGTGCTGGCCAGGGCGACGTTCGACGGACGGGTGCCGCCGCCGCCGGC
GCTCGGCCGAGTCGTGCTCGCGGCGGGGATGATCGCCGCGTGGTCGGGGC
TGGTAGAGGTCAGCGTGCCGAGCCCCCAGAAGACGCTTCCTTGTGACGGT
TTCCCGCTGGCGCTCGATGATAACGCTGTACTGCCGGTGCTCGGCGCTCT
TGGCGCGGCAGGGGTGTTCCGTGTCCTTGGGCTGGGGCGCTGCGAGCTGC
GACCGTGGCTGTTTGTTTGAGTTGGTCTCGCGTGAGGTATTCTGGAAAGG
GTCTCCTGGGAGCGCTCGGCTGCGCTGCGGTCCTGACCCTGGCCAACTCG
GTCGTGCTGGCCAGGGCGACGTTCGACGGACGGGTGCCGCCGCCGCCGGC
GCTCGGCCGAGTCGTGCTCGCGGCGGGGATGATCGCCGCGTGGTCGGGGC
TGGTAGAGGTCAGCGTGCCGAGCCCCCAGAAGACGCTTCCTTGTGACGGT
TTCCCGCTGGCGCTCGATGATAACGCTGTACTGCCGGTGCTCGGCGCTCT
TGGCGCGGCAGGGGTGTTCCGTGTCCTTGGGCTGGGGCGCTGCGAGCTGC
GACCGTGGCTGTTTGTTTGA
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