mRNA_P-fluviatile_contig13.1882.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1882.1
Unique NamemRNA_P-fluviatile_contig13.1882.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A6H5JNV3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNV3_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 1.230e-124
Identity = 223/284 (78.52%), Postives = 234/284 (82.39%), Query Frame = 1 
Query:    1 PPVLSCVLGSCCLLLALVDRSMAFVAT-TGVTAGPGV----SIGRCGTLSMLGSTTVRAAAVGTTPGQQXXXXXXXXXTATQPLGMMAIDTTNNPITSKVYGKAD-KTASKAPEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFPKPTT 834
            P VLS VLGSC LLL L+DRS AFVA     TA PG     S G  G  S L S T   AAV   P +Q          ATQP   MA+DTTNNPITSKVYG+AD K  SK P+MNEEIAASGIEEVRCVIS+KGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATE+KEVKMSYKIETHDYMVRL+NA+KFV QGHRVRIVVTFRGREQSHMDLGNVLLD+VT DL+GLALVEPKRREGNRLSMIVFPKPTT
Sbjct:   15 PSVLSSVLGSCYLLLTLIDRSTAFVANGCARTAQPGALVRPSSGGGGAASPLRSGT--NAAVSVVPREQQRRR------ATQPA--MALDTTNNPITSKVYGRADTKGGSKTPDMNEEIAASGIEEVRCVISVKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATEMKEVKMSYKIETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALVEPKRREGNRLSMIVFPKPTT 288
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A836C915_9STRA (Translation initiation factor IF-3, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C915_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.590e-48
Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 1 
Query:  277 SKVYGKADKTASKA-----PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPK 825
            S +YG+   +  K      P MN EI    + +VR  I+    DEQLGIM T +AL +A + G+DL+MI ++AEPPV KIID+GK KY  +++KKD+K   K +E+KEVKMSYKIE HDY VRL+NAKKF+ QG RV++VV FRGREQ HMDLG+ LL ++  D +G    + + +REGNRLS+I+ PK
Sbjct:   80 SSMYGRGRGSTRKPVEEDKPMMNSEIR---VPKVRVSIAKPEGDEQLGIMDTAEALAKAQELGVDLIMIAENAEPPVCKIIDFGKLKYMSEKKKKDSKKNAKQSEMKEVKMSYKIEDHDYQVRLRNAKKFIAQGDRVKVVVQFRGREQQHMDLGHELLTKIVADCEGTVATDGRPKREGNRLSLILAPK 265
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A6V1LHA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LHA9_HETAK)

HSP 1 Score: 168 bits (425), Expect = 1.170e-43
Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFPK 825
            P MNEEI A  +  V  V +    DE LGI+S Q+AL++A +   DLV+I + A+PPV KI++Y +F Y Q +++K+  +  +A ELKEVKMSYKIE HDY VR K A KF+  GHRV+++V FRGREQ HMDLG  LL R++ D++ LAL EP RREGNRL+M++ P+
Sbjct:   59 PPMNEEITAPQLRVV--VANPAASDEALGILSLQEALEKAEELDQDLVLIAEKADPPVAKIMNYSRFLYNQQKKQKEQMSAQRAKELKEVKMSYKIEKHDYEVRAKAATKFLKGGHRVKLLVQFRGREQQHMDLGRDLLGRLSGDVEDLALPEPIRREGNRLTMLLTPR 225
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A7S2H9R6_9STRA (Translation initiation factor IF-3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H9R6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.140e-41
Identity = 85/166 (51.20%), Postives = 117/166 (70.48%), Query Frame = 1 
Query:  325 MNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFP 822
            MN+EI  S I  V  + +  G DE LG+M+  +A+++A++  LDLV+I+  ++PPV KI+DYGK KY+ +R+KKDN  K K  E+KEVKMSYKI+THDYMVR K A KF+  G RV+ VV FRGREQ H++LG  LL ++++D    A  +  RREGNR+ M + P
Sbjct:   63 MNDEIKQSPIRVV--LANAAGGDEMLGVMTNTEAMEKANEANLDLVLISPGSDPPVCKIVDYGKLKYQMERKKKDNLKKTKVNEMKEVKMSYKIDTHDYMVRQKAAIKFLKSGSRVKAVVQFRGREQQHINLGQELLKKLSEDCKEFATSDRPRREGNRVVMFINP 226
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A7S3KWM0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWM0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.200e-39
Identity = 94/185 (50.81%), Postives = 123/185 (66.49%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVI--SIKGMDEQLGIMSTQQALQRASDEG-LDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPTT*TGGSQTRR 861
            P MN+EI  S   E+R VI  S  G DE LG+MS + AL RA  EG LDL++I   ++PPV KI+DY K++Y Q+++ K+ K   KA+ELKEVKMSYKI+ HDY VR KNA KF+ QG RV+  V FRGRE  H +LG  LLD++ ++L  LA  E + +REG  LS+I+ P+P      S  RR
Sbjct:   57 PTMNDEITQS---ELRVVIASSSGGKDEALGVMSRKDALARAQAEGGLDLILINDSSDPPVCKIVDYSKYRYMQEKKAKEIKKNSKASELKEVKMSYKIDIHDYSVRKKNAAKFLQQGDRVKCTVMFRGREVQHDNLGFELLDKMAEELSNLAAKEGRPKREGRNLSLILGPRPEVMKAISDGRR 238
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: W7TKZ8_9STRA (Translation initiation factor if-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKZ8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.600e-39
Identity = 88/173 (50.87%), Postives = 119/173 (68.79%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISI-KGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPT 831
            P MN+ +       VR VIS  +  DE  G+M+T +AL +A + GLDL+MI++ A+PPVVKIIDYGKFKY  +++KK+     K TE+KEVKMSYKIE HDY VR+K   +F+ +G +V++++ FRGREQ H+DLG+ LL +V  DL  LA+ E   RREG RL  +  PK T
Sbjct:  162 PPMNDALLRMAPGNVRVVISNPEDGDEMAGVMATTEALAKAKEMGLDLIMISETADPPVVKIIDYGKFKYSLEKKKKEXXXXAKTTEVKEVKMSYKIENHDYGVRMKQMTRFLDEGDKVKVMIQFRGREQQHIDLGHELLGKVGGDLKELAVQEGVVRREGGRLIALFKPKKT 334
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A0P7ZU86_9CYAN (Translation initiation factor IF-3 n=5 Tax=Phormidium TaxID=1198 RepID=A0A0P7ZU86_9CYAN)

HSP 1 Score: 146 bits (368), Expect = 8.760e-37
Identity = 80/170 (47.06%), Postives = 118/170 (69.41%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPK 825
            P++NE I    I     VI+  G  EQLGIM+  +A+  A ++ LDLV+++  A+PPV +I+DYGK+K++Q+++ K+ K K  ++ELKEVKM YKIE HDYMVR+K A++F+  G +V+  V FRGRE  H DL   LL+R+ KDLD +A V+ + +REG  + M++ PK
Sbjct:   13 PQINERIRFPQIR----VIATDG--EQLGIMTPAEAITVAEEKDLDLVLVSDKADPPVCRIMDYGKYKFEQEKKNKEAKKKQHSSELKEVKMRYKIEDHDYMVRVKQAQRFLKSGDKVKATVMFRGREIQHTDLAYQLLERLAKDLDDMAEVQQRPKREGRSMMMMLAPK 176
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A448ZK50_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK50_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.260e-36
Identity = 83/172 (48.26%), Postives = 116/172 (67.44%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEG-LDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKP 828
            P MNEE+    I       + KG DE LGIMS  +AL +A + G LDL+++  +++PPV KI DY K++Y ++++ K+ K   KATE+KEVKMSYKI+ HDY VR KNA KF+ QG+RV+  V FRGRE  H  LG  LLD++ ++++ +   E + +REG  LSMIV P+P
Sbjct:   76 PPMNEEVPVGDIRVT--ATNAKGKDEPLGIMSRDEALAKAKEMGGLDLILLNPNSDPPVCKIADYSKYRYMKEKKAKEVKKNSKATEIKEVKMSYKIDVHDYEVRKKNALKFLKQGNRVKCSVMFRGREVQHDKLGYELLDKLAEEMEDMCTREGRPKREGRNLSMIVTPRP 245
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: UPI00034B3B90 (translation initiation factor IF-3 n=1 Tax=Baaleninema simplex TaxID=2862350 RepID=UPI00034B3B90)

HSP 1 Score: 145 bits (366), Expect = 1.590e-36
Identity = 82/172 (47.67%), Postives = 115/172 (66.86%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPT 831
            P++NE I    I      I  +G  EQLGIMS   AL+ A ++ LDLV+++  A+PPV +I+DYGK+K++Q++R K+ K K  ++ELKEVKM YKIE HDY VR+K A +F+  G +V+  V FRGRE  H DL   LL+R+ KDL  LA V+ + +REG  + M++ PK T
Sbjct:   13 PQINERIRFPKIR----AIDTEG--EQLGIMSPADALKIAEEKDLDLVLVSDKADPPVCRIMDYGKYKFEQEKRSKEAKKKQHSSELKEVKMRYKIEDHDYQVRVKQAVRFLKAGDKVKATVMFRGREIQHTDLAQQLLERLAKDLTDLAEVQQRPKREGRSMMMLLSPKKT 178
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BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: IF3_SYNP2 (Translation initiation factor IF-3 n=7 Tax=Cyanobacteria TaxID=1117 RepID=IF3_SYNP2)

HSP 1 Score: 145 bits (365), Expect = 2.180e-36
Identity = 77/173 (44.51%), Postives = 116/173 (67.05%), Query Frame = 1 
Query:  319 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPTT 834
            P++NE I    I        I G  EQLGIM+  +AL  A +E LDLV++++ A+PPV +I+DYGK+K++Q++R ++ K K    +LKEVKM YKIE HDY VR+ +A++F+  G +V+  +TFRGRE  H +L   LLDR+ KDL+ +  ++ + +REG  + MI+ PK +T
Sbjct:   12 PKINERIRFPNIR------VISGDGEQLGIMTPAEALAIAEEEDLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQHNADLKEVKMRYKIEEHDYQVRVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNMMMILAPKKST 178
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV3_9PHAE1.230e-12478.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C915_9STRA1.590e-4852.38Translation initiation factor IF-3, C-terminal dom... [more]
A0A6V1LHA9_HETAK1.170e-4353.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H9R6_9STRA2.140e-4151.20Translation initiation factor IF-3 n=1 Tax=Dictyoc... [more]
A0A7S3KWM0_9STRA3.200e-3950.81Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
W7TKZ8_9STRA3.600e-3950.87Translation initiation factor if-3 n=2 Tax=Monodop... [more]
A0A0P7ZU86_9CYAN8.760e-3747.06Translation initiation factor IF-3 n=5 Tax=Phormid... [more]
A0A448ZK50_9STRA1.260e-3648.26Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
UPI00034B3B901.590e-3647.67translation initiation factor IF-3 n=1 Tax=Baaleni... [more]
IF3_SYNP22.180e-3644.51Translation initiation factor IF-3 n=7 Tax=Cyanoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2511208..2517249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.2
Seed ortholog evalue3.2e-96
Seed eggNOG ortholog2880.D8LS76
KEGG koko:K02520
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGs2QUHV@2759,COG0290@1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranslation initiation factor 3, C-terminal
Ec32 orthologEc-12_004560.1
Exons5
Model size2278
Cds size774
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.716464-UTR-P-fluviatile_contig13:2511207..25126481622815576.716464-UTR-P-fluviatile_contig13:2511207..2512648Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2511208..2512648 -
1693562292.1016932-UTR-P-fluviatile_contig13:2511207..25126481693562292.1016932-UTR-P-fluviatile_contig13:2511207..2512648Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2511208..2512648 -
1622815576.8021286-UTR-P-fluviatile_contig13:2517186..25172491622815576.8021286-UTR-P-fluviatile_contig13:2517186..2517249Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2517187..2517249 -
1693562292.176508-UTR-P-fluviatile_contig13:2517186..25172491693562292.176508-UTR-P-fluviatile_contig13:2517186..2517249Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2517187..2517249 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.728108-CDS-P-fluviatile_contig13:2512648..25127261622815576.728108-CDS-P-fluviatile_contig13:2512648..2512726Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2512649..2512726 -
1693562292.1161127-CDS-P-fluviatile_contig13:2512648..25127261693562292.1161127-CDS-P-fluviatile_contig13:2512648..2512726Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2512649..2512726 -
1622815576.74276-CDS-P-fluviatile_contig13:2513492..25135821622815576.74276-CDS-P-fluviatile_contig13:2513492..2513582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2513493..2513582 -
1693562292.1290483-CDS-P-fluviatile_contig13:2513492..25135821693562292.1290483-CDS-P-fluviatile_contig13:2513492..2513582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2513493..2513582 -
1622815576.755858-CDS-P-fluviatile_contig13:2514143..25142911622815576.755858-CDS-P-fluviatile_contig13:2514143..2514291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2514144..2514291 -
1693562292.140078-CDS-P-fluviatile_contig13:2514143..25142911693562292.140078-CDS-P-fluviatile_contig13:2514143..2514291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2514144..2514291 -
1622815576.766666-CDS-P-fluviatile_contig13:2515418..25155881622815576.766666-CDS-P-fluviatile_contig13:2515418..2515588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2515419..2515588 -
1693562292.1532931-CDS-P-fluviatile_contig13:2515418..25155881693562292.1532931-CDS-P-fluviatile_contig13:2515418..2515588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2515419..2515588 -
1622815576.7803402-CDS-P-fluviatile_contig13:2516898..25171861622815576.7803402-CDS-P-fluviatile_contig13:2516898..2517186Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2516899..2517186 -
1693562292.1667578-CDS-P-fluviatile_contig13:2516898..25171861693562292.1667578-CDS-P-fluviatile_contig13:2516898..2517186Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2516899..2517186 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1882.1prot_P-fluviatile_contig13.1882.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2512649..2517186 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1882.1

>prot_P-fluviatile_contig13.1882.1 ID=prot_P-fluviatile_contig13.1882.1|Name=mRNA_P-fluviatile_contig13.1882.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=258bp
MAFVATTGVTAGPGVSIGRCGTLSMLGSTTVRAAAVGTTPGQQQQQRQRR
RRTATQPLGMMAIDTTNNPITSKVYGKADKTASKAPEMNEEIAASGIEEV
RCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYG
KFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQG
HRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMI
VFPKPTT*
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mRNA from alignment at P-fluviatile_contig13:2511208..2517249-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1882.1 ID=mRNA_P-fluviatile_contig13.1882.1|Name=mRNA_P-fluviatile_contig13.1882.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6042bp|location=Sequence derived from alignment at P-fluviatile_contig13:2511208..2517249- (Porterinema fluviatile SAG_2381)
CCACCGGTGCTCTCTTGCGTCCTCGGCTCCTGCTGCCTGCTGCTGGCCCT
GGTCGACCGGTCGATGGCCTTCGTCGCAACTACCGGCGTCACCGCCGGCC
CGGGAGTCTCGATTGGCCGCTGCGGCACACTCTCGATGCTTGGAAGCACA
ACGGTGAGGGCAGCGGCGGTGGGAACTACGCCCGGACAGCAGCAGCAGCA
GCGGCAGAGAAGGAGAAGGACGGCGACGCAGCCGCTGGGGATGATGGCGA
TCGACACCACCAACAACCCCATCACGTCCAAGGTGTACGGGAAGGCGGAC
AAGACGGCTTCCAAGGCGCCGGAGATGAACGAGGAAATCGCGGCGAGCGG
GGTGAGGGAAAGGGATTGATAGTTGATGTATATTCCGTATTGCGAGTTTT
CAGGGGGGGGCACCACCGGCTGAACAAACACATGCCGATGTTTCATGAAC
GGAGGAGACCGCGGGAGAGAAAAGGGAACGAGCTCGCAGGAGGCTTGAGG
AAGGGGAGATTTTTGTGAACATGCGTGTGCGCCAACTGCAATACAAGGCG
TGAATAGCTCTTGTGGTAAGTGGTCCGATTCAGCGTTGCTTGCCCTTGTT
CCGCGAAATTAGAAATGAAGGCACGAGGACGAGAGTTTTCGGACCGTGAG
TAAAACGGGAGCAGATGTGTAAGTTTTTTTTCCTGGCGGTCGAGAGTCGT
GCGGTACGTCCAAGCAGGAGGAGGACGAGGACGTTAGTGCAACTGTGTCA
CATGATCGGGGCAAGCTTGTTCAAGGTGTCGCTTCCTCATCCTAAGCACT
CTCTTCCCCAGCTAGTTCGTGTCTAACTCAACACACGTACTGCCACTGTT
GTGTGTAGATCCATGTTTGCTGGCGTTTAACCCTCTCCATCACATGCCCG
GCCGTACGACTCAGCCCCAGATGTTGTCGATTGACGACCGCTTTGGGGAC
ATGCAACCTATTCTCAGCAATTCAACCTGTTAAATTTGGGTAGCTTTTTG
GCCATTGTATTTTGGACAAGCTTACGAGACATGCCGAGGAGCGTACCTAA
TTACTTACCACGGGACAGCATCGACGCATGTCGCGCTCGTCGATCGTTTC
TCCAGACATAAGTCATCGCAGCGCGGAAATTGTCGTGCGGTCGGTCGCTC
GTCCTCGCTATGGCCCCAAGACGGCACCCACTGCAGGCAGCAGAAGGCAG
CAGCAACAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTCTTCACGTGT
CGTGCGCAAAGCTCCCCCTTGTATTACTTCTCGTGATACACACGTGTAAC
GCTTCTCTCGTGCGTGCCTACCCTGCAGCCCCCTCCTCGCCGCAAAATCG
ACAAAATCGCTAACGTGTACCGAACTTGCTAGAACAAAAGCGCGACAAAC
ACGTTTTCACGTCTATCCATTCCTCGCATATTTCTGTGTCAGAGTCGCTG
CGAGTATATCAGACGCGGGTATACATGTGATGGTTGCTTCTCCAAAGGTA
CTCTCGAAATCGTTTAGCCCCCGCCTTTCTTATACCTGTCCGTCGCCGCC
CGTCTGATTGCCGATTTGTCGGCATACTCTTGGGCGCTGTCTCTCGAACG
GAAAAAATAACTTACAAACCGATATTGGGGGGTCTTGTTTGGGCTAATTG
GAACGACGCAGATTGAGGAGGTACGATGCGTGATATCTATCAAGGGTATG
GACGAGCAGCTAGGGATCATGTCGACGCAGCAGGCGCTCCAGAGGGCCAG
TGACGAGGGCCTTGACTTGGTGATGATCACCAAGGACGCTGAACCACCGG
TGGTCAAGATCATCGACTACGGGAAGTTCAAGTGAGCGACGAGATAGTGA
GGGGTCCCACCCGGCGTTTCCCCTGCTAGCTGCTTGGCTAGGGAGTACAC
TCAAAACACGCAGAAAGGCCGGGTGTCTTTCCACCGTAGTGTGTCGCTGG
ATTGGGCTCGCCCGTGTGTTTTCTTTGCTCCAATCTCCATTTTTTTTCGT
TGCTTTCTCTCTTGGTGTAAAAGCGAAGGATTCCCCGCGCGACCCTCAGG
TCCAAGTTTCTCAAACCCTTGATGGCCGTTGGAAGTCGTTGTGGCGGACA
ATGCTGTAGTGTTTGTGGCGTTATGCCGCATTGTAACTTCGGACGCGATC
TATCTCCGTCGATGGGTCCGTGTTGCGGTCGCGTCGGGGTAAGAGGCATC
CACGGCGATCGTTTGTTCCGATCCCAATCGCGCTGTTGTCCAATTATTTC
GAAAATGCGTTGCACACGTAGCAAACACCACCACAGCGGTACAACGCACC
GGCTTGAGATCAGTGACCTCCCAAGTGCGAGGTTTTCTATCCGCGTGTGA
CCAACGTCTACTGAAACTTGGCGTATACGAGTGTGTCGACCCTTGCTCCC
CCCCCTCCGGACCGCCGTTCCTTCAAGGCGCTGAGGGCCGCTCAACTTCT
CGTCGGCAAATCCGAATATATACACTTCGGAGCATATATTTTCAAGTGTT
CAAAGGGTATGTAAATGCATGTTCACTGAGACGAGAATCATTAGCAAGTA
CAGTATGGTGAAGACGCCCGCTCGAACCCAACTATACTCACCGCACATGT
CGTTTAAGGTTTGCTTCGAAGCAAGTGCGGGTTTTTTCAAGCAGTGACAC
GAGAATCAAAGTGCAGCACTACTGAATCCGTCCGAATTTGTGCGGTGAAT
TGGACCACAATAGCTTTGAATTTCCCCATAGATTGTGGTGAATAGGATGC
GCTGAAGCTTTCGTTACTCTTTAGAAAAGCAAACGAGACTGTCGTGCACA
ATCGGCCCACTTCATTCAGCTTACGGTTCGCCCAGAACGGGGTGAACGCC
AAATACTCCGATTTCCCTTTGTTGTGATCTCCCTTTTAACGTGAAAATGC
AACATGGGTTGAAATTGTGCAACTACACACGTTCGTGTATGATGCGATGT
GAAAACAGATACAAACAGGACCGTAGAAAAAAGGACAACAAGGCCAAGCA
CAAGGCAACGGAGTTGAAGGAGGTGAAGATGTCTTACAAGATTGAAACGC
ACGACTACATGGTCAGGCTCAAGAACGCCAAAAAGTTCGTCACACAGGGG
CACAGGGTGAGAAACAGGAGGAGAAGGAGAGACCGATTGAATGCAGAGGG
GGCAGCGGAGGAGCGGAGAAGGGGAAAGAAAGAGGACATGGCTGGAAGGG
GCAGGAGGACAACGGACGCAGAGGAAATAGCAAAACACAGGGCGGTACAG
GGGGCAGGGGGGGCAGCGACGAAGGGGAACACGCAGCACATGTCAACTTC
ACGTTTTGTGTACCCCCCGATGTTCTGGTTCAGTGGCTGGCGGAACATAT
TTTGATGTTTTGTTTCCACCTTTTGTCTCGAGTGGACCAAAATACACCAT
AGAACACCACACCAAATCTTGCCATGCCATGCCATACCATGCCATGCAAT
ACCATCCCAGTATATGTTGCGGTAAACGCAGGCAGCATGTACGGTTTGGT
TCGCTCCCTCCTGTGTCCTTGCCCCGCCCTCCGTCCTCACGGTCTCTGAT
TCCCAGCAGCGTTGTTTTGCTCGAGCGTCCTCCTGTTCCTCTTCCTGACC
TTGTCAATCTCTTCCATTCCCCCCCCTCCCCTCCCCGTACTTTTCCCTCG
TCTCTCCTCGTATTCAGGTCCGGATCGTGGTAACGTTCCGCGGGCGGGAG
CAGTCCCACATGGACTTGGGGAATGTTCTCTTGGACAGGGTCACCAAAGA
CCTCGATGTAAGAGCGTAGGCAGCAGCGCTCTGTTTTTGTTCTTCGATGT
GGTCGGAGGCCCTTTCCAGTGCGGTTAACGCGGGGCGGGTGCCTGATACA
GTGGAGGGTCATAAAGCTTCGCAAGTACCCGCGCAAAGAAGGGCTCTTCA
GCTTGGTGTAGATTGTTTGTGGGCGTCCTTTTCTTCTTGCGTGTCGCTAC
TGAATAATTGACCGAAGCGATTGGGCACACGCACAACGTTGTGAATGGGG
GACCTGAAGAACAGGTGACACGCAAGGAAAGCATACCGTGCAAGCACCGC
TAAGCGGCGTGCCGCCGCACTTTTGCAGCCCGCCATCTACCAACAAGTGT
CGTGAAGCTTGAACGACATGGGGAGGCGAAGGGGACGAGACGAGCGGAGG
GTCGGAGACATTGACCGATGTGTATGGCGGCCGAGGAATCTTCCGGAGGG
GGGAGGGAGGGGGGAAATGGGGCGGTCGGGAAGCGGGAATTTCGCAGGAC
CCCGATGAGAGAGAGACCACGTGGTGGAAAGGTCCTTGACAGTAACGAAT
GCAATAATATTGCGAAAGTTCCGCATTATGTCGGCAAGAAAAGAGCTCCC
GCGCATGGGATTTCGGCGAAAGGAGCTGAACGCGTCACAAGATAGAGACC
ATGTCCGTATGATTCTTTTTGCGACAGCTTCGTACATGCTTAGTTTCAAT
TCCCCTCCCCTCCATTCTCAATGACGAGCTACCCCCCACGCCCCTTCATG
TTCATCCAAAATTTCGCATGCAGGGTCTTGCGTTAGTTGAGCCCAAGAGG
CGCGAAGGCAACCGCCTAAGCATGATCGTCTTCCCAAAGCCGACGACATA
GACGGGAGGGAGCCAAACGCGGCGATGGAGGACGCGAGCGGGTTGCGAGT
ATAGTGCTGTGTGGGGCGGAGTGGAAGGACGAATTCTTCCCCATGTTGGT
GCTCCCATTTCGTATGATCCTTCTTGCCCCACGGAGATGTTGTGTGTATC
GAACCGGCGCGAACCGGCGCGCTACTGCGCGGCGGAATGTGAGCACGCGT
CGGTGAGCAAGGAAAGAGGACGGCCAGCTGGGGACGGTGATTGGTAGAGC
GAGGGGGTCGGGGAGGTGGGGTGTTGCGCGATGGATTGGTATGTCTGGAT
CGCGTGATCTCGTGATCCAGGACAGCCAGCGAAATGAAACCCTGCAACAC
AGAATGAAAGATCGAAAGGTGGATGTAGGGATGGGCAAGCTGTGAACCAA
CGGGCTGCAGGGGCAGGACGAGACGGAAGGGCGCACCGGCTACGATGCGA
CCATGTGTTTCGGTCGCTGCGTTGCCGTGCTCGGGTCAGTGTTGATCGAC
GGGCTTGCCTCTCTGGCAGTTAAAAGGGTTCAACGAACCTCTGTGACGCG
TGGGAGTTGCCAGGCCGAGAAGAAGAGAAGGACCGACTACGAAGCAAATG
ACTTGATTCGAAAGGTGCGAGTGAGAGATAGGGGGTGCAGCTTGCATTTT
TGACGCCCGGTTCTTGCGGCCCTTGGGTGTGTTAACGGCAGCGTGAAAGT
GAGGAGGGAGTGCGATCAACCCTGCTTTTGTGCTCAAAGTCGAATCGGAA
TCTATACGTTGCTCAGAAGCTCCGTTCGTGGAGGGCAATAGACTGCGTTG
ATTTCTTCAAAGAACCATGGGGACGAAAGTGCAGACGTCAGCCACGATAT
CTCGGTCTCAGGGGGTTCCCCCGTCGCCCGTCGGTGACTCGCCCTCCGCC
CCGCCACCCACCCTATGTACTTCCGTGCCCATTTCCCGTTGTTAACACGG
TCTCGTCGAAAACTGTTGTCGTAATCGCGTGCAGTACGCGACGTTCTGAC
TCGCCGAGGTTAGGGAGGAATAGAGGACCCAAATATAGTTCGCCTACGAT
AGTGAGCGGGGACAAAGAAGCGGTGCTGTGTCCCTTGTCGAGCTTCAGCA
GGTACTTCCGGCGGTCAAAAGCCAGGTGTTTCGCGCTAGGGGGATCCCAA
AGTAAGGGCCGCAAACGTGCAGGTTTTCCTAAGGCATGAAATTGTGTCAC
GTGTACGTGTATCTATTTCTGACTCGTTTTCTCGACTCGAGGAGGCGCGT
CCTTGCCTTATCGTGGCTCGGTTATTGGTTTGTGCATTTGTCGATTCCAG
GTTTCGAGGGGGACGAGGAGTTGTCGCTTCTCCCGCGTCGAAGGCGCCGG
CTGTGCTTCTCTTGGGAATAATTCGTTGGTTTTTGACATATTACAATATT
TTTTCTTTTTGCGCCACCCCAGCCTCAAATACCAGAAACGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2511208..2517249-

>mRNA_P-fluviatile_contig13.1882.1 ID=mRNA_P-fluviatile_contig13.1882.1|Name=mRNA_P-fluviatile_contig13.1882.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1548bp|location=Sequence derived from alignment at P-fluviatile_contig13:2511208..2517249- (Porterinema fluviatile SAG_2381)
ATGGCCTTCGTCGCAACTACCGGCGTCACCGCCGGCCCGGGAGTCTCGAT
TGGCCGCTGCGGCACACTCTCGATGCTTGGAAGCACAACGGTGAGGGCAG
CGGCGGTGGGAACTACGCCCGGACAGCAGCAGCAGCAGCGGCAGAGAAGG
AGAAGGACGGCGACGCAGCCGCTGGGGATGATGGCGATCGACACCACCAA
CAACCCCATCACGTCCAAGGTGTACGGGAAGGCGGACAAGACGGCTTCCA
AGGCGCCGGAGATGAACGAGGAAATCGCGGCGAGCGGGATGGCCTTCGTC
GCAACTACCGGCGTCACCGCCGGCCCGGGAGTCTCGATTGGCCGCTGCGG
CACACTCTCGATGCTTGGAAGCACAACGGTGAGGGCAGCGGCGGTGGGAA
CTACGCCCGGACAGCAGCAGCAGCAGCGGCAGAGAAGGAGAAGGACGGCG
ACGCAGCCGCTGGGGATGATGGCGATCGACACCACCAACAACCCCATCAC
GTCCAAGGTGTACGGGAAGGCGGACAAGACGGCTTCCAAGGCGCCGGAGA
TGAACGAGGAAATCGCGGCGAGCGGGATTGAGGAGGTACGATGCGTGATA
TCTATCAAGGGTATGGACGAGCAGCTAGGGATCATGTCGACGCAGCAGGC
GCTCCAGAGGGCCAGTGACGAGGGCCTTGACTTGGTGATGATCACCAAGG
ACGCTGAACCACCGGTGGTCAAGATCATCGACTACGGGAAGTTCAAATTG
AGGAGGTACGATGCGTGATATCTATCAAGGGTATGGACGAGCAGCTAGGG
ATCATGTCGACGCAGCAGGCGCTCCAGAGGGCCAGTGACGAGGGCCTTGA
CTTGGTGATGATCACCAAGGACGCTGAACCACCGGTGGTCAAGATCATCG
ACTACGGGAAGTTCAAATACAAACAGGACCGTAGAAAAAAGGACAACAAG
GCCAAGCACAAGGCAACGGAGTTGAAGGAGGTGAAGATGTCTTACAAGAT
TGAAACGCACGACTACATGGTCAGGCTCAAGAACGCCAAAAAGTTCGTCA
CACAGGGGCACAGGATACAAACAGGACCGTAGAAAAAAGGACAACAAGGC
CAAGCACAAGGCAACGGAGTTGAAGGAGGTGAAGATGTCTTACAAGATTG
AAACGCACGACTACATGGTCAGGCTCAAGAACGCCAAAAAGTTCGTCACA
CAGGGGCACAGGGTCCGGATCGTGGTAACGTTCCGCGGGCGGGAGCAGTC
CCACATGGACTTGGGGAATGTTCTCTTGGACAGGGTCACCAAAGACCTCG
ATGTCCGGATCGTGGTAACGTTCCGCGGGCGGGAGCAGTCCCACATGGAC
TTGGGGAATGTTCTCTTGGACAGGGTCACCAAAGACCTCGATGGTCTTGC
GTTAGTTGAGCCCAAGAGGCGCGAAGGCAACCGCCTAAGCATGATCGTCT
TCCCAAAGCCGACGACATAGGGTCTTGCGTTAGTTGAGCCCAAGAGGCGC
GAAGGCAACCGCCTAAGCATGATCGTCTTCCCAAAGCCGACGACATAG
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