prot_P-fluviatile_contig13.1882.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1882.1
Unique Nameprot_P-fluviatile_contig13.1882.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length258
Homology
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A6H5JNV3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNV3_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 1.110e-121
Identity = 187/205 (91.22%), Postives = 196/205 (95.61%), Query Frame = 0
Query:   54 ATQPLGMMAIDTTNNPITSKVYGKAD-KTASKAPEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFPKPTT 257
            ATQP   MA+DTTNNPITSKVYG+AD K  SK P+MNEEIAASGIEEVRCVIS+KGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATE+KEVKMSYKIETHDYMVRL+NA+KFV QGHRVRIVVTFRGREQSHMDLGNVLLD+VT DL+GLALVEPKRREGNRLSMIVFPKPTT
Sbjct:   86 ATQPA--MALDTTNNPITSKVYGRADTKGGSKTPDMNEEIAASGIEEVRCVISVKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATEMKEVKMSYKIETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALVEPKRREGNRLSMIVFPKPTT 288          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A836C915_9STRA (Translation initiation factor IF-3, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C915_9STRA)

HSP 1 Score: 182 bits (461), Expect = 4.530e-53
Identity = 99/189 (52.38%), Postives = 132/189 (69.84%), Query Frame = 0
Query:   72 SKVYGKADKTASKA-----PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPK 254
            S +YG+   +  K      P MN EI    + +VR  I+    DEQLGIM T +AL +A + G+DL+MI ++AEPPV KIID+GK KY  +++KKD+K   K +E+KEVKMSYKIE HDY VRL+NAKKF+ QG RV++VV FRGREQ HMDLG+ LL ++  D +G    + + +REGNRLS+I+ PK
Sbjct:   80 SSMYGRGRGSTRKPVEEDKPMMNSEIR---VPKVRVSIAKPEGDEQLGIMDTAEALAKAQELGVDLIMIAENAEPPVCKIIDFGKLKYMSEKKKKDSKKNAKQSEMKEVKMSYKIEDHDYQVRLRNAKKFIAQGDRVKVVVQFRGREQQHMDLGHELLTKIVADCEGTVATDGRPKREGNRLSLILAPK 265          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A6V1LHA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LHA9_HETAK)

HSP 1 Score: 168 bits (425), Expect = 8.130e-48
Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFPK 254
            P MNEEI A  +  V  V +    DE LGI+S Q+AL++A +   DLV+I + A+PPV KI++Y +F Y Q +++K+  +  +A ELKEVKMSYKIE HDY VR K A KF+  GHRV+++V FRGREQ HMDLG  LL R++ D++ LAL EP RREGNRL+M++ P+
Sbjct:   59 PPMNEEITAPQLRVV--VANPAASDEALGILSLQEALEKAEELDQDLVLIAEKADPPVAKIMNYSRFLYNQQKKQKEQMSAQRAKELKEVKMSYKIEKHDYEVRAKAATKFLKGGHRVKLLVQFRGREQQHMDLGRDLLGRLSGDVEDLALPEPIRREGNRLTMLLTPR 225          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A7S2H9R6_9STRA (Translation initiation factor IF-3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H9R6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.430e-45
Identity = 85/166 (51.20%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   88 MNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMIVFP 253
            MN+EI  S I  V  + +  G DE LG+M+  +A+++A++  LDLV+I+  ++PPV KI+DYGK KY+ +R+KKDN  K K  E+KEVKMSYKI+THDYMVR K A KF+  G RV+ VV FRGREQ H++LG  LL ++++D    A  +  RREGNR+ M + P
Sbjct:   63 MNDEIKQSPIRVV--LANAAGGDEMLGVMTNTEAMEKANEANLDLVLISPGSDPPVCKIVDYGKLKYQMERKKKDNLKKTKVNEMKEVKMSYKIDTHDYMVRQKAAIKFLKSGSRVKAVVQFRGREQQHINLGQELLKKLSEDCKEFATSDRPRREGNRVVMFINP 226          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: W7TKZ8_9STRA (Translation initiation factor if-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKZ8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.020e-43
Identity = 88/173 (50.87%), Postives = 119/173 (68.79%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISI-KGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPT 256
            P MN+ +       VR VIS  +  DE  G+M+T +AL +A + GLDL+MI++ A+PPVVKIIDYGKFKY  +++KK+     K TE+KEVKMSYKIE HDY VR+K   +F+ +G +V++++ FRGREQ H+DLG+ LL +V  DL  LA+ E   RREG RL  +  PK T
Sbjct:  162 PPMNDALLRMAPGNVRVVISNPEDGDEMAGVMATTEALAKAKEMGLDLIMISETADPPVVKIIDYGKFKYSLEKKKKEXXXXAKTTEVKEVKMSYKIENHDYGVRMKQMTRFLDEGDKVKVMIQFRGREQQHIDLGHELLGKVGGDLKELAVQEGVVRREGGRLIALFKPKKT 334          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A7S3KWM0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWM0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 6.700e-43
Identity = 91/174 (52.30%), Postives = 120/174 (68.97%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVI--SIKGMDEQLGIMSTQQALQRASDEG-LDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKP 255
            P MN+EI  S   E+R VI  S  G DE LG+MS + AL RA  EG LDL++I   ++PPV KI+DY K++Y Q+++ K+ K   KA+ELKEVKMSYKI+ HDY VR KNA KF+ QG RV+  V FRGRE  H +LG  LLD++ ++L  LA  E + +REG  LS+I+ P+P
Sbjct:   57 PTMNDEITQS---ELRVVIASSSGGKDEALGVMSRKDALARAQAEGGLDLILINDSSDPPVCKIVDYSKYRYMQEKKAKEIKKNSKASELKEVKMSYKIDIHDYSVRKKNAAKFLQQGDRVKCTVMFRGREVQHDNLGFELLDKMAEELSNLAAKEGRPKREGRNLSLILGPRP 227          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A448ZK50_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK50_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.040e-40
Identity = 83/172 (48.26%), Postives = 116/172 (67.44%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEG-LDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKP 255
            P MNEE+    I       + KG DE LGIMS  +AL +A + G LDL+++  +++PPV KI DY K++Y ++++ K+ K   KATE+KEVKMSYKI+ HDY VR KNA KF+ QG+RV+  V FRGRE  H  LG  LLD++ ++++ +   E + +REG  LSMIV P+P
Sbjct:   76 PPMNEEVPVGDIRVT--ATNAKGKDEPLGIMSRDEALAKAKEMGGLDLILLNPNSDPPVCKIADYSKYRYMKEKKAKEVKKNSKATEIKEVKMSYKIDVHDYEVRKKNALKFLKQGNRVKCSVMFRGREVQHDKLGYELLDKLAEEMEDMCTREGRPKREGRNLSMIVTPRP 245          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: A0A0P7ZU86_9CYAN (Translation initiation factor IF-3 n=5 Tax=Phormidium TaxID=1198 RepID=A0A0P7ZU86_9CYAN)

HSP 1 Score: 146 bits (368), Expect = 3.160e-40
Identity = 80/170 (47.06%), Postives = 118/170 (69.41%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPK 254
            P++NE I    I     VI+  G  EQLGIM+  +A+  A ++ LDLV+++  A+PPV +I+DYGK+K++Q+++ K+ K K  ++ELKEVKM YKIE HDYMVR+K A++F+  G +V+  V FRGRE  H DL   LL+R+ KDLD +A V+ + +REG  + M++ PK
Sbjct:   13 PQINERIRFPQIR----VIATDG--EQLGIMTPAEAITVAEEKDLDLVLVSDKADPPVCRIMDYGKYKFEQEKKNKEAKKKQHSSELKEVKMRYKIEDHDYMVRVKQAQRFLKSGDKVKATVMFRGREIQHTDLAYQLLERLAKDLDDMAEVQQRPKREGRSMMMMLAPK 176          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: UPI00034B3B90 (translation initiation factor IF-3 n=1 Tax=Baaleninema simplex TaxID=2862350 RepID=UPI00034B3B90)

HSP 1 Score: 145 bits (366), Expect = 6.130e-40
Identity = 82/172 (47.67%), Postives = 115/172 (66.86%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPT 256
            P++NE I    I      I  +G  EQLGIMS   AL+ A ++ LDLV+++  A+PPV +I+DYGK+K++Q++R K+ K K  ++ELKEVKM YKIE HDY VR+K A +F+  G +V+  V FRGRE  H DL   LL+R+ KDL  LA V+ + +REG  + M++ PK T
Sbjct:   13 PQINERIRFPKIR----AIDTEG--EQLGIMSPADALKIAEEKDLDLVLVSDKADPPVCRIMDYGKYKFEQEKRSKEAKKKQHSSELKEVKMRYKIEDHDYQVRVKQAVRFLKAGDKVKATVMFRGREIQHTDLAQQLLERLAKDLTDLAEVQQRPKREGRSMMMLLSPKKT 178          
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Match: IF3_SYNP2 (Translation initiation factor IF-3 n=7 Tax=Cyanobacteria TaxID=1117 RepID=IF3_SYNP2)

HSP 1 Score: 145 bits (365), Expect = 8.650e-40
Identity = 77/173 (44.51%), Postives = 116/173 (67.05%), Query Frame = 0
Query:   86 PEMNEEIAASGIEEVRCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYGKFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQGHRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPK-RREGNRLSMIVFPKPTT 257
            P++NE I    I        I G  EQLGIM+  +AL  A +E LDLV++++ A+PPV +I+DYGK+K++Q++R ++ K K    +LKEVKM YKIE HDY VR+ +A++F+  G +V+  +TFRGRE  H +L   LLDR+ KDL+ +  ++ + +REG  + MI+ PK +T
Sbjct:   12 PKINERIRFPNIR------VISGDGEQLGIMTPAEALAIAEEEDLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQHNADLKEVKMRYKIEEHDYQVRVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNMMMILAPKKST 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV3_9PHAE1.110e-12191.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C915_9STRA4.530e-5352.38Translation initiation factor IF-3, C-terminal dom... [more]
A0A6V1LHA9_HETAK8.130e-4853.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H9R6_9STRA2.430e-4551.20Translation initiation factor IF-3 n=1 Tax=Dictyoc... [more]
W7TKZ8_9STRA5.020e-4350.87Translation initiation factor if-3 n=2 Tax=Monodop... [more]
A0A7S3KWM0_9STRA6.700e-4352.30Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448ZK50_9STRA3.040e-4048.26Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0P7ZU86_9CYAN3.160e-4047.06Translation initiation factor IF-3 n=5 Tax=Phormid... [more]
UPI00034B3B906.130e-4047.67translation initiation factor IF-3 n=1 Tax=Baaleni... [more]
IF3_SYNP28.650e-4044.51Translation initiation factor IF-3 n=7 Tax=Cyanoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 88..162
e-value: 4.6E-23
score: 81.3
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 171..254
e-value: 2.9E-25
score: 88.0
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 163..256
e-value: 5.3E-29
score: 101.9
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 170..255
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyGENE3D3.10.20.80coord: 83..162
e-value: 7.3E-24
score: 85.6
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilySUPERFAMILY54364Translation initiation factor IF3, N-terminal domaincoord: 100..164
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 97..254
e-value: 1.7E-47
score: 159.1
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 36..252
IPR001288Translation initiation factor 3HAMAPMF_00080IF_3coord: 82..256
score: 23.309
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 36..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2512649..2517186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1882.1mRNA_P-fluviatile_contig13.1882.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2511208..2517249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1882.1 ID=prot_P-fluviatile_contig13.1882.1|Name=mRNA_P-fluviatile_contig13.1882.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=258bp
MAFVATTGVTAGPGVSIGRCGTLSMLGSTTVRAAAVGTTPGQQQQQRQRR
RRTATQPLGMMAIDTTNNPITSKVYGKADKTASKAPEMNEEIAASGIEEV
RCVISIKGMDEQLGIMSTQQALQRASDEGLDLVMITKDAEPPVVKIIDYG
KFKYKQDRRKKDNKAKHKATELKEVKMSYKIETHDYMVRLKNAKKFVTQG
HRVRIVVTFRGREQSHMDLGNVLLDRVTKDLDGLALVEPKRREGNRLSMI
VFPKPTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019814Translation_initiation_fac_3_N
IPR019815Translation_initiation_fac_3_C
IPR036788T_IF-3_C_sf
IPR036787T_IF-3_N_sf
IPR001288Translation_initiation_fac_3