mRNA_P-fluviatile_contig13.1862.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1862.1
Unique NamemRNA_P-fluviatile_contig13.1862.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: D8LS56_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS56_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 2.620e-119
Identity = 195/232 (84.05%), Postives = 212/232 (91.38%), Query Frame = 1 
Query:  208 MRAHAAALEEQLRXXXXXXXXXXXXXPASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARDLASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVTITHGDAGGPPAVGSF 903
            MRAHAAA+     XXXXXXXXXXXXX ASRTALKNIPEVKIAALDLAEETNRSCSVCLE+HELGE VVKLPCAHIFHR CVWEWLELHCTCPVCRFELETEDA YERERRVRM+GRRPRYRR EL+GLSIPQ+RNLARGQNVNIAGCLEKADIVRCL++SGTIE+V+SE P+YDA +L++M LRQLRSLMLQAGIG EGCLEK DLL+R+ SSRLVT+THG+A  PPA  SF
Sbjct:    1 MRAHAAAVXXXXXXXXXXXXXXXXXXXASRTALKNIPEVKIAALDLAEETNRSCSVCLEDHELGETVVKLPCAHIFHRECVWEWLELHCTCPVCRFELETEDAGYERERRVRMRGRRPRYRRQELEGLSIPQVRNLARGQNVNIAGCLEKADIVRCLLDSGTIEVVNSEIPSYDAEELSNMGLRQLRSLMLQAGIGTEGCLEKADLLDRIASSRLVTVTHGEAVPPPAPPSF 232
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BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A836C9U0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 8.910e-54
Identity = 102/220 (46.36%), Postives = 144/220 (65.45%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARDLASMSLRQLRSLMLQAGIGV---EGCLEKNDLLERVMSSRLVTITHGDAGGPPAVGSFPHLAPSSSTSN 936
            PAS+ AL+ IPEV +   DL EE NR CS+CL++H L E V +LPCAHIFH+ CV +WL  +CTCP CR+ELETE+AA+E  RR RMQGR  R+RR EL+  S+ ++R++A    VN  GCLEK+D++ C+  S   E+ ++  P Y    L ++++RQL+ +M  AG+GV    G LEK DL+ ++ +S  + +   D G   A GS    +PSS  S+
Sbjct:   10 PASKKALRQIPEVLVTLDDLVEEANRCCSICLDDHMLAEVVCRLPCAHIFHKECVLDWLLRNCTCPACRYELETENAAFEAGRRQRMQGRTLRFRRRELELSSVARLRSIAGDLGVNTDGCLEKSDLIACIARSPRAEVFEAALPEYTHAQLMALTVRQLKDIM--AGVGVLLATGVLEKADLIAQLANSGRIAVV--DVGAAAAAGSHCPSSPSSHESS 225
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A482S6I1_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6I1_9ARCH)

HSP 1 Score: 168 bits (425), Expect = 6.480e-44
Identity = 84/197 (42.64%), Postives = 122/197 (61.93%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPT-YDARDLASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVTITHGD 873
            PAS  A+ N+P V + + DL EETN+ C  CL E ELG    KLPC H++HR CV +WL+  CTCPVCR+ELET+D  YE +R+ RM+ R+ R RR E+   S+ Q+R L    N+ IA C++K +IV  +V SG I++ +   P      D  + S+ QL+ L+L  G+   G LEK++L + ++ S  + I  G+
Sbjct:   65 PASNRAINNLPSVIVTSDDLLEETNKECVFCLVEQELGSTACKLPCGHLYHRGCVVQWLQRKCTCPVCRYELETDDPQYETQRKKRMKTRKLRMRRDEIQSKSVAQLRQLCGQLNLTIAHCIDKKEIVDMMVASGLIDITERVPPIEISYEDFNNKSVSQLKHLLLSFGLSDAGALEKHELRKVLLESERIHIFDGE 261
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BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A8J2SU41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU41_9STRA)

HSP 1 Score: 166 bits (420), Expect = 6.130e-43
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLA-RGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARD--LASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVTITHGD 873
            P    AL+++P V+    DLA++ NR C VCLE  E+G++  KLPC H+FH  CV +WL  H TCP CR+EL + DAA+E  RR RM  R PRYRR EL+ L + ++R LA RG  V  AG  EKAD+V+ L+++  ++++  E    DA    +A+ S+RQL+ LM   G+    C++K DL++ + +S LV     D
Sbjct:  143 PMDEAALRDLPVVRATEEDLAKDGNRECCVCLEAQEVGDRATKLPCGHLFHTECVVQWLRKHGTCPSCRYELASSDAAFEASRRERMARRVPRYRRRELNRLPVRELRALAARGDRV-FAGLTEKADLVKALIDANLVQIIPEEVRQLDATRAAVAAWSIRQLKQLMADVGVDSTRCVDKRDLVDAIAASGLVAFAADD 340
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BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7S2SCZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCZ0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.020e-40
Identity = 71/184 (38.59%), Postives = 119/184 (64.67%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPT-YDARDLASMSLRQLRSLMLQAGI--GVEGCLEKNDLL 828
            PA +  ++ +P +K+   DL +E NR C +CLEE+ L ++V++LPCAHI+H  C+ +WL   C+CP+CR+EL+T D+ YE+ R  RM+ R+PRY R EL+ + I  + +L    N++  G  EKAD++  ++ESG I+++ + KP  +   DL+ M + +L+  M  AG+    +  +EK D++
Sbjct:   51 PACKKIIRKLPIIKVTPEDLVDENNRECCICLEENNLNDRVLRLPCAHIYHSQCISDWLAKCCSCPICRYELQTNDSEYEKGRIERMKHRKPRYARYELERMKIRDLSSLCSRFNLSTNGMTEKADLICAILESGKIDVISAPKPVAHKLSDLSGMGVGKLKRAMADAGVFFDAKDVVEKEDMV 234
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7S2XTC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTC7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.110e-39
Identity = 85/195 (43.59%), Postives = 123/195 (63.08%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPT-YDARDLASMSLRQLRSLMLQAGIGVE--GCLEKNDLLERVMSSRLVTI 861
            PAS+ A++ +P V +A  DL +E NR C +C E + L ++V +LPCAHIFH  C+  WL  HCTCPVCR+EL T+D+AYER R  RM+ R+PRY R EL+ +SI ++R L     V+     EK DIV+  V+S  I+++ + +P  Y A DL  M   QL+  M +AG+  +    LEK+D++   +SS  V +
Sbjct:   55 PASQKAIRQLPTVIVAPEDLVDENNRECCICFEPNSLKDRVTRLPCAHIFHHECIKGWLTRHCTCPVCRYELPTDDSAYERTRVERMKHRKPRYARYELERMSISELRALGDFCKVS-RSFKEKKDIVQACVDSSRIDIIAAPEPVQYRASDLKQMKPGQLKKSMEKAGVFFDPIDVLEKDDMIRIFISSGRVDV 248
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7S1XPZ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPZ5_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.340e-39
Identity = 81/195 (41.54%), Postives = 127/195 (65.13%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNI-AGCLEKADIVRCLVESGTIELVDSEKPTYDA--RDLASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVTI 861
            PAS++ L+N+P + +A +D+  + N SC VC+EEHELG+K  KL C HIFH+AC+  WLE  CTCP+CRFE+ T+DA +E++RR+RM GR+ RYR++EL+  S+  +  + R   +    G L K++ ++ L+ES  ++ V S+ P  D   + L SMS ++LR LM + G+  +  L K  ++ R+  S  + I
Sbjct:  197 PASKSTLQNLPMMTVAKVDIEADGNDSCCVCMEEHELGQKATKLSCGHIFHKACISSWLEQRCTCPICRFEMPTDDADFEKDRRMRMAGRKRRYRKSELEAKSVEALEAVMREIGITPPTGALTKSEFMKVLLESEFVQ-VQSDAPPRDMTRKQLESMSAKELRELMAELGVATKERL-KARMIRRLEESGRINI 389
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BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7S1AZA0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZA0_NOCSC)

HSP 1 Score: 152 bits (385), Expect = 6.160e-39
Identity = 74/211 (35.07%), Postives = 123/211 (58.29%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARD--------------------LASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVT 858
            PAS  A++++P++K+ A D+ +     C +CL+E  +GE   ++ C H+FH  C+  WL+    CPVCR+EL T++  YER R+ RM  R+PR R  +L   +  ++R L+    VN+ GCLEK++ V C+  SG +E++  +  T DAR                     L+++S+R+L+  M + G+  +GCLEK +++ER+M S  V+
Sbjct:   78 PASAAAMRSLPKIKVTAYDVEKNETNECVICLDELIIGEPATRIHCGHLFHEDCIKGWLKKSNLCPVCRYELPTDNTEYERGRQARMADRKPRMRLMDLTVKTSQELRRLSEHLGVNVQGCLEKSEFVDCIRNSGLVEIIPEDGDTPDARIPPASSNCCGPRAQPRITTAMLSTLSVRELKEQMTRLGVDFQGCLEKKEMIERLMMSGYVS 288
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7S4A164_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A164_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.250e-39
Identity = 79/198 (39.90%), Postives = 120/198 (60.61%), Query Frame = 1 
Query:  289 ASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRV--RMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARDLASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVMSSRLVTITHGDA 876
            AS +ALK IP V++AA DL ++ N  C++CLE+H  GE   +LPC H+FH+ CV EWL  HC CPVCR+EL T+   YER RR   R  GRR R R+ ELD ++I  + ++ +    +  GC+E+ D++R ++ S  +++V          +L +MSL  +  L  +AG+ ++G LE+ D++  +  S  V I  G A
Sbjct:   17 ASTSALKRIPIVRVAADDLTKD-NECCTICLEDHVPGELAARLPCGHLFHKDCVVEWLSRHCVCPVCRYELPTDSVVYERTRREHNREGGRRVRVRKRELDAMNIRALLDVLKAAGESARGCVERDDLIRRVLTSSRVDVVAETTVEVSRSELDAMSLGAVARLAKRAGVVIDGALERPDVVALLEQSGRVLIVDGAA 213
[Close]
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Match: A0A7R9U2I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2I9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.070e-38
Identity = 88/257 (34.24%), Postives = 138/257 (53.70%), Query Frame = 1 
Query:  286 PASRTALKNIPEVKIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHCTCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARGQNVNIA-GCLEKADIVRCLVESGTIELV-DSE------KPTYD--ARD--------------------------------------------------------------LASMSLRQLRSLMLQAGIGVEGCLEKNDLLERVM 840
            PASR+ L+N+PEVK++ +DL  + N SC +C+E+HELGE   KLPC HIFH  C+ +WL+ HCTCPVCRFEL TEDA +E  RR RM GR+ +YRR EL+  S+ +I+++     V      L K+D+++ L++S  I+L+ D++      +P+Y   AR+                                                              L+  S+ +LRS+M + GI ++GC+EK+D++++++
Sbjct:  179 PASRSVLRNLPEVKVSQVDLETDGNESCCICMEDHELGEMATKLPCGHIFHTECIKDWLQRHCTCPVCRFELPTEDAGFEEHRRERMGGRKRKYRRRELESKSVREIKHIMMEIGVRPPPDALMKSDLIQVLIDSEQIQLLPDTDGAAAGAEPSYGHVAREQDNRKYSPEQKQSTTEEKVDEAAATREGVRRRAGERGSGRSGAMPTAPSPRAAPRQESATEVLSKKSVSELRSIMRERGISLQGCIEKSDMVQKIV 435
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS56_ECTSI2.620e-11984.05RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836C9U0_9STRA8.910e-5446.36RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A482S6I1_9ARCH6.480e-4442.64RING-type domain-containing protein n=1 Tax=archae... [more]
A0A8J2SU41_9STRA6.130e-4343.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SCZ0_9STRA5.020e-4038.59Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2XTC7_9STRA1.110e-3943.59Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1XPZ5_9STRA1.340e-3941.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1AZA0_NOCSC6.160e-3935.07Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S4A164_9STRA8.250e-3939.90Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U2I9_9STRA1.070e-3834.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2286630..2293535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.4
Seed ortholog evalue7.9e-98
Seed eggNOG ortholog2880.D8LS56
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-12_004750.1
Exons7
Model size1415
Cds size1389
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1862.1prot_P-fluviatile_contig13.1862.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2286630..2293511 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815573.5336783-CDS-P-fluviatile_contig13:2286629..22873491622815573.5336783-CDS-P-fluviatile_contig13:2286629..2287349Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2286630..2287349 -
1693562285.839347-CDS-P-fluviatile_contig13:2286629..22873491693562285.839347-CDS-P-fluviatile_contig13:2286629..2287349Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2286630..2287349 -
1622815573.5468214-CDS-P-fluviatile_contig13:2288239..22884901622815573.5468214-CDS-P-fluviatile_contig13:2288239..2288490Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2288240..2288490 -
1693562285.849667-CDS-P-fluviatile_contig13:2288239..22884901693562285.849667-CDS-P-fluviatile_contig13:2288239..2288490Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2288240..2288490 -
1622815573.560073-CDS-P-fluviatile_contig13:2289051..22891661622815573.560073-CDS-P-fluviatile_contig13:2289051..2289166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2289052..2289166 -
1693562285.8587842-CDS-P-fluviatile_contig13:2289051..22891661693562285.8587842-CDS-P-fluviatile_contig13:2289051..2289166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2289052..2289166 -
1622815573.5718098-CDS-P-fluviatile_contig13:2290098..22901771622815573.5718098-CDS-P-fluviatile_contig13:2290098..2290177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290099..2290177 -
1693562285.8683848-CDS-P-fluviatile_contig13:2290098..22901771693562285.8683848-CDS-P-fluviatile_contig13:2290098..2290177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290099..2290177 -
1622815573.5857735-CDS-P-fluviatile_contig13:2290607..22907621622815573.5857735-CDS-P-fluviatile_contig13:2290607..2290762Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290608..2290762 -
1693562285.8779597-CDS-P-fluviatile_contig13:2290607..22907621693562285.8779597-CDS-P-fluviatile_contig13:2290607..2290762Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290608..2290762 -
1622815573.5978708-CDS-P-fluviatile_contig13:2290993..22910481622815573.5978708-CDS-P-fluviatile_contig13:2290993..2291048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290994..2291048 -
1693562285.89113-CDS-P-fluviatile_contig13:2290993..22910481693562285.89113-CDS-P-fluviatile_contig13:2290993..2291048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2290994..2291048 -
1622815573.6108432-CDS-P-fluviatile_contig13:2293497..22935111622815573.6108432-CDS-P-fluviatile_contig13:2293497..2293511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2293498..2293511 -
1693562285.8993194-CDS-P-fluviatile_contig13:2293497..22935111693562285.8993194-CDS-P-fluviatile_contig13:2293497..2293511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2293498..2293511 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815573.6273627-UTR-P-fluviatile_contig13:2293511..22935351622815573.6273627-UTR-P-fluviatile_contig13:2293511..2293535Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2293512..2293535 -
1693562285.90704-UTR-P-fluviatile_contig13:2293511..22935351693562285.90704-UTR-P-fluviatile_contig13:2293511..2293535Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2293512..2293535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1862.1

>prot_P-fluviatile_contig13.1862.1 ID=prot_P-fluviatile_contig13.1862.1|Name=mRNA_P-fluviatile_contig13.1862.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=463bp
MATRRSSPPPQPQYQQPGAWGENIFSNFMGRMGIPQEQDQQQANRRSRAP
TPPPAGASAQAMRAHAAALEEQLRRDQEEERRQRGPPPASRTALKNIPEV
KIAALDLAEETNRSCSVCLEEHELGEKVVKLPCAHIFHRACVWEWLELHC
TCPVCRFELETEDAAYERERRVRMQGRRPRYRRTELDGLSIPQIRNLARG
QNVNIAGCLEKADIVRCLVESGTIELVDSEKPTYDARDLASMSLRQLRSL
MLQAGIGVEGCLEKNDLLERVMSSRLVTITHGDAGGPPAVGSFPHLAPSS
STSNSGGFEGDGGRGAARESAPSETGAPYGAGAGTGWGGGGGGGGGGSVE
GGSSESDPRIRRTAGWWWAGRGRRDAGGTGNAVSSEGGTRRRRLGRSRRR
RRRHDRLQQQRRRHQPCLSRACLSRSCGRSRARWGSARRDAWKNGIWWSE
SGHVGATGRQGVL
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mRNA from alignment at P-fluviatile_contig13:2286630..2293535-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1862.1 ID=mRNA_P-fluviatile_contig13.1862.1|Name=mRNA_P-fluviatile_contig13.1862.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6906bp|location=Sequence derived from alignment at P-fluviatile_contig13:2286630..2293535- (Porterinema fluviatile SAG_2381)
TCGTGAGAGACCCAACGTTGCGCCATGGCTACCCGAAGGTAAGAACTTCC
CTCTTTTCCCTTCACATTTACGCTTGCGCCCCCCATGCCGGGCAGCGCAA
TGTAAACAAATCAAAAATCACTTTTCTTTTAAGTCTCCGCATTTGTCCCG
AGGGACTCACGCTTGCCCTCTGTTGCCTCTCTGCACCTTTTCTGGGTGTT
TCCGTCTTCTCGAAGCTGAAGTAAGATCGGGCACATCTCTGCCGCCTACG
GCACAAACGATTATCGTTTGGTGCTTGTCGCCGGTGGGGCATCTATGAAG
AGCATTTAACACAATATGTGGCGCGGGGCGGGGAGAGATGGCGAGAGATA
GAGAGGCGCGCACACACACACAGACATTGCACCCGTACCCGTTCTCTCCT
CCGCGCAGGCGGTGTGTTTACTGGCGATCTGTCAATCTGAGGTGCCGACC
TCCCGTGATTTGTTATGTACTCCCGGCCGCCGTTGCTTTGCCGACTTCAT
CCTCGGGGGGGGATAGTGCACCATGTTGACGGCAGTCAACGGCAGCAAGT
CGAATGCGAGGCAAGGCGAATTGAACAACCAAACCGAAAAGCTCTCACTG
CGTCACGCATCTTTCTCACCTACAGACACACCTCAAAACTTCCGGAGCGT
AGCGCTCTGTCCTCGGTGTTACTCTCCCACTTTTCTCTCCTCACACGTCT
CGCGCAGTCAGGCTTGTCTTTTTCCCGGTGTGCTTGCATTGTGGATGAAC
CGGTTCCGTCTCTGGAATGTCTGGAAGTCGTGTGCGTTGCACGGCGATAT
GGTGTTGGTGTGCCCCATTCTCCGCCAGCAGCCACTATCTCGCTCCTTCT
CCTTCGCTTTCCCTCCCCTGTCCGGGAGACTCTTCCTTGTGATAAAAGAT
GCCGAAAGAGATACGAAAGAAAAAAAAAAGACCGCACATACATCTGAGAT
CGTGTTTCCCTCTACCGACGTGAGCCACAGACCCGTGTCGACAACCTTCA
CCCGACACTGGTTTGCAGGGTGGCATGAGTGCGGTCGCCCCTCGCTCTGC
TGCAACCCTACGATATGCATTCGCGGTATGGGGCTGCTGGGTCAAGAACG
CGAAGGCTTTACCCGGAGTACCACCGATAAAACACACGCGCTTGTTGCTT
TGTGTCTTATCCATCTCCCCTCACGCCGTCAGCCGCGACTCATGAGGTCC
GCTGGGCGTATCCGGCACCCTTTGTGATTATGTCGCGCTGCAGCAACAGA
AGGTTGGGGCAAAAGCCAAGGCTCAGCCGAAAGAGGAGCTAGTTTGCGCT
TGACACGTACAGAGGCCGTACTGCACAACACCGCTTTTATCTCTGTGCTG
CTGTCCGACAACGGCACCATGCCCTCACCGCTGTGACGTTCACATTCATC
CACACTCCCGAGCACTAGCCCTCGCCGGCTCATGTCTCGTGTCTGCGGAT
TTATTGGTGCCTCTTCGCTAAGGATAGAGCGAGTTTTCAGAGCGTCTGCC
GCAACCGCGTATCTGCGGACTGGTGGGCACGCTCGCTCTGGTGACTTCTG
TGAAGGCTGAGTTCGGGGTAATTTAATCTCAGCGACTTGGGCACGGTTGG
GGAGCGCATCGGGGGACACGCGAACGCTGCATTATTTCCCCTTGCTGGGC
AGCCTGTGTCTATTCCTCAGTCGGCAGGACTATTGAGCTCCCCGATGTGT
CGAGGCGGGGTGTTCATGTTTTTTACGGGGGGGCGCACGGCGCCAGCCGC
CAACGAACGGAGATGGAATTCAACGGGTGACCGCAATAAGCAAAAGTGTC
GCAGGAAAATTGGATGGAGCAGGCGCACGTCGTTCCGTGGGAAAGGAATG
AACACCATCGAAGCACGTTTTTTTTTTTTGCTTGAACGAAACCCAAGAAA
CGCGGAACGAATAAGGTGACTTCCTGAACTCACAAACACGTGCGAGAGGG
GGGACGCTACGGACTCGTGATTCGCCGCCTCTCGGTCCCACCCGGAATTT
TTTGGTTCATCGTCCGGGTCGGATGCAAGGGCTCACCGGCTGTTGCCTCC
ACTCTCTATGCATCGATTCCAAGTTTGAAGGAGTGTTTCCCTCTCCGCCT
TCGCGAGCACAGCAGCGGCTAGCGCAATACTAAAGTGATATCGTATTGAG
GTTTTCGGTCGGCTGGTGGTACGTACCTGTAAATTTCCTGTTTAAGCCGT
CTTCAGCAGGCTGTAGGGACAACGAGTACCTTTCGGCGACGAGGCAGTCA
CGAAATCGATTGACGAGGAGGGGCTTTGCATTTTTTTCTCGTCTGATTCT
TTCAAGGAGGCAGGAGGTGCACGGCTAATGCGCACGTTGCTCTTGCGTGG
TCGGAGGTGGAGCTTTGTCGGCACACTCGAGGAAATTTCTCCTGTGCCCC
GGCGGATTTCACATTTGGTTTGGTACATTGTCGTCCCCGGCTTCCGTCGC
TTGTTTTCTGCACATAATTTTCGGACGTTACCCGCAGGTCTTCCCCACCA
CCACAGCCCCAGTACCAGCAGCCAGGAGCGTGGGGTGAAAACGTGAGACG
GTGTTCGTGTTCGTGTGTTCCCGTGTAGAAATTATGGGCCAACCGCGCCA
CTCAATAGACGAAAAGGTAAAGCTTTATTCTACCCCCGAGGGGGTAGCCG
CGGTGTCTTTTCCCCCTCCTCCCCTCCTCCCAGCGTTTTTTTCCCACGCA
CATGGCCGTGAAGCTAACACGTGCCCGCCATTGCCGTCGCCTTCAAACTT
CTGCCCTGGACGAATGTTGCCAGATTTTTTCCAATTTCATGGGCCGCATG
GGGATACCACAGGAACAGGACCAGCAGCAGGCCAACAGAAGGAGTCGTGC
TCCCACGCCGCCTCCCGCCGGTGCCTCGGCTCAGGCCATGCGAGCCCACG
CCGCAGCATTAGAGGAGCAGCTGCGGCGGTGAGTCCCCTCCATCAACTTG
CTTCTTCGTGACCACCGGTTTTGGTCCCACAGAACACTGCGTCTTACTCC
CCCTTCTGCACTCAAGTGTCCCGTCTGCACTTGTGTGTGCCACACTTGCT
TTGGGGGGACACACAGAGTGCAAGGCACCCATAGAGACAGGGGAAGGGGA
ATTGAAGGCTCGAGATGCGATTGCTCGTCAGGCGCGCACGTGCAAATGTC
ATCCGCGCAGGCAAACAAGTGGGCTAGCAGGCAGGCAGGCAGTGAGGCAG
GGAGGCCGACAGGTGCGAGAAACACTCCATTCGTGTGACCTTTCCTCTCG
TTGAGGACGGGCCGACATTGAAATCGTTTTCTACTTTTTTCGGACCCCAA
CCGCGCACGCGTGTGCCCTCTCGGAACCACCGACGACCAACAATCACACA
CACGACAGAGATCAGGAGGAGGAGCGAAGACAGCGGGGGCCTCCGCCGGC
CAGCCGCACGGCCCTCAAGAACATACCGGAGGTCAAGGTGAGGACGCAGG
CAGCAGTTTTAACCACGTCCGGAGAAAAGATATGCGACCACAGCAGGTTG
TTTTCTCGGGGTCTGGGGGATGGATGCGGTTGGGCGGGGATGGTGATCGG
GATGGAAGTCACCGCCCGAGAAAGTTTTTCGTTCTTTTGTCGAAGCCAGG
CCATTTGTGGGACATCCGGGCGTGTCGTCTGCGCTGTTTGATTATCGCAA
TAATGCCACCGCCCCTGGACACGAATTTAGACGTCCGGTTGCCTCGACGA
GATGAGATCAGACGCGCCAAGCGTTTTGTTTTCTGAACACAGCCAGTGAC
GAGTCGTTGAAGCCGCGCTGGCGCTTTCTGGCCAAGCACTTGCCTGCCAC
GTGACGAGGGTGGGCGTGTGCAGGCATTCGGCTGCGCTCGTCTAGTGTCG
ATATGTCATGTGTAAGGGAGTCGAAAGCCGCCCCGGTGTGCAAGAATCTT
CATGTGTAGATATCGGGGGGGGCGATATGCACACACCTCGAAATTCCGAC
GGCAGTTGTATGTAGAAGAAATGGTCCTGGGCGAGAAGCAGCTATATATA
GCTGATCTTTTGACAACCCGTCAAATCAGCGAATGTAGGGGGCGGCCGTG
GTGAGATATCTGTCAGCAGTGCTTCTGAGGAGTGCCAGTGCGTAGCGTAA
GCAGGTGTGCCCAGATCAGACACGCGTATATGCGCCCACGGTGGGCATTC
TGTGAGAGCGCGGGGCAATGTGCGGCCCTTTGTTTCGTCAGGTCCGCCAA
TTTTCTGTTTCGGCAGCGGGCGCTTGCTAACAGGATGGTATTGTTAGTTT
GTTCGGCCGTCCGTCCGTCCTCTTTGCTGGTCCCCTGCTCCGATCGCGGT
CGCGCGATTTGAATTATGGTCGAATGCAAATGAAGGGGTGTTTTGTGTGT
GGGGCCGGTCTGTTGGCAGATCGCGGCGCTTGACTTGGCGGAGGAGACGA
ATCGCTCGTGCAGCGTCTGCCTCGAAGAGCACGAGCTAGGAGAAAAAGTG
GTCAAGCTGCCGTGCGCTCATATCTTCCATCGAGGTGAGCGGTTGGCTTG
AGTAGCAATCCACCCAAGAAATACGTTCAGAGACAAGAGATGGCACTCAC
TCACCTTCACGTTTGTTGTAGAATATTTCAATTATCGTGGCATGCTGGCG
ATGAGGCTTGGACTCGAGCTTTGGCAGTGCATTCTTCGAGCTGTTATTGC
TGCGGTAGTAGCAGATTTAGTTGTTGTCGTCGTCATCGTCTCGACCGCTT
GGCTTTTACTGCTCCCTCATTGCTTCATGAATGTCCGCTACCTAACCCCT
GGGGATTTGCTCTTCTCTCCGCTTTTTCTGTTCCAACCCGTTGCTCCCCC
TCTTCCTCTGTCCCTCTCCCCCTCTCTCTTCGTCTCAGCGAAGTGTCTTT
TTCCGGCACATTATTTTCTTTTTAGACCACTGAATGTCTCTCTTGCAGCC
TTCTCCCCCTCCTCCACAGTTCTCGCCATCTGGTCAACTGCCCCCCGCTT
GATTCATCGTACTTTGCATTTCTACCTCTCTATTTATCTCTGTCGCTCTA
TCGCACTATTTCCGGCCACCACCCCGCCGTGCTGCTCGATTGCAGCGTGT
GTGTGGGAGTGGTTGGAGCTCCACTGCACGTGCCCCGTGTGCCGCTTCGA
GCTGGAGACTGAGGACGCCGCCTACGAGAGGGAGAGGAGGGTGCGTATGC
AGGGCAGGCGGCCGCGATACCGCCGGACAGAGCTGGACGGCCTCAGCATT
CCTCAAATACGCAACCTCGCCCGGGGGCAGAACGTGAACATCGCCGGCTG
CCTCGAGAAGGCGGATATTGTGAGATGCCTCGTTGAATCTGGGACGGTAA
GTGAATTTATTAATAGTTGTTGCTTTGTCCATAACGTTGATCAGTGTGCG
CATCCAGACGATAGGTATAACGCAACCTCCTCTCGATGGTTGCCATTAGA
AGAAGCACGCCACTTTCGAAGCGATACGCAGTTGTCCGGAGAACGATAAT
GAACCACGCGGGGCTGACTTCGAGGGAAAGCGCGCACGTGGATTTGAAAC
GAAGTAGCGAAAAAGAGGAGGCGTTGGAAGGTGCCGCTTGCACCGGTGAA
AATATCATTTTCGCTCTTTTGCACAGAAAAAGTGAATATCTTGACGGATC
CTTGTCTTTTTTGCATTGTGATCCTTTTGAAGCGAGATCGCTCGTTGGTT
CGCCCCGTTCGCACCTCGAATGGTGGGGCGGTGCTGATTATGAGCTACAA
CGCAGCCACCACCAATTGCAGCAGGGGCGAAGTACGCTTCGCTTGGTTGG
CGCTACCATCCCGCGCGGGACACCGACCGACCTTTGTGCTGGTCCGCTCC
CTCGTATTTCGATTCCAACCTTTGCCCTATGTACACCACGCCTACCTCCC
ACGTCATGGCCGTGAGCTGGCGCACGGCATGCTTGCGTCGTATGAAACGC
TGCCTCTCCACGCTCCCTTCCCTTCCCTTCCCTTCTTTTCGCTGGTGGAT
GTATCATAGGCGGATTGACCGCGCCGACGCAATCGATCAATTCAATCGGA
AAATAGCGGCGTGTTTCGATCGATCGGTACAATTTCTAAAACACCACTTC
TCCATGGAACGGCGCGCGTGCTCAAAAGCCAAGCGCCTACCGACCGTACC
GTACACTCACCCGCAAGTGCCCTGCATGATCTACCGTAATTTGTTATTGC
TCGAAAATTCTACAACAACAACGACCACGCGAACAGATCGAGCTCGTCGA
CTCCGAGAAACCAACGTACGACGCCCGAGACCTCGCCAGCATGAGCCTCA
GGCAGCTCCGGTCCCTGATGCTCCAGGCCGGGATCGGAGTCGAGGGCTGC
CTGGAGAAGAACGACCTCCTGGAGCGCGTCATGTCCTCTCGCCTCGTGAC
CATCACGCACGGCGACGCTGGCGGCCCGCCTGCGGTGGGGTCTTTTCCGC
ACCTGGCGCCGTCTTCTTCGACGTCCAACAGCGGAGGTTTCGAAGGCGAC
GGGGGTCGAGGCGCCGCCCGAGAGTCTGCGCCGTCGGAGACGGGAGCACC
TTATGGAGCAGGGGCAGGAACTGGATGGGGAGGAGGAGGGGGAGGAGGAG
GTGGGGGAAGCGTGGAGGGAGGGTCGTCGGAGTCGGACCCGCGCATCCGG
CGAACCGCGGGGTGGTGGTGGGCTGGTCGCGGGCGTCGCGATGCGGGCGG
GACGGGGAATGCTGTGAGTTCGGAGGGGGGGACTCGCCGGCGGCGGCTTG
GCCGCAGCCGCCGCCGCCGCCGCCGCCACGACCGGCTGCAGCAGCAACGG
CGGCGGCATCAGCCGTGCCTCTCGAGAGCATGTCTGTCAAGGAGCTGCGG
GAGATCACGAGCTCGCTGGGGGTCAGCACGGCGGGATGCTTGGAAAAACG
GGATATGGTGGAGCGAATCAGGGCATGTGGGCGCTACCGGCAGGCAGGGA
GTGTTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2286630..2293535-

>mRNA_P-fluviatile_contig13.1862.1 ID=mRNA_P-fluviatile_contig13.1862.1|Name=mRNA_P-fluviatile_contig13.1862.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2778bp|location=Sequence derived from alignment at P-fluviatile_contig13:2286630..2293535- (Porterinema fluviatile SAG_2381)
ATGGCTACCCGAAGATGGCTACCCGAAGGTCTTCCCCACCACCACAGCCC
CAGTACCAGCAGCCAGGAGCGTGGGGTGAAAACGTCTTCCCCACCACCAC
AGCCCCAGTACCAGCAGCCAGGAGCGTGGGGTGAAAACATTTTTTCCAAT
TTCATGGGCCGCATGGGGATACCACAGGAACAGGACCAGCAGCAGGCCAA
CAGAAGGAGTCGTGCTCCCACGCCGCCTCCCGCCGGTGCCTCGGCTCAGG
CCATGCGAGCCCACGCCGCAGCATTAGAGGAGCAGCTGCGGCGATTTTTT
CCAATTTCATGGGCCGCATGGGGATACCACAGGAACAGGACCAGCAGCAG
GCCAACAGAAGGAGTCGTGCTCCCACGCCGCCTCCCGCCGGTGCCTCGGC
TCAGGCCATGCGAGCCCACGCCGCAGCATTAGAGGAGCAGCTGCGGCGAG
ATCAGGAGGAGGAGCGAAGACAGCGGGGGCCTCCGCCGGCCAGCCGCACG
GCCCTCAAGAACATACCGGAGGTCAAGAGATCAGGAGGAGGAGCGAAGAC
AGCGGGGGCCTCCGCCGGCCAGCCGCACGGCCCTCAAGAACATACCGGAG
GTCAAGATCGCGGCGCTTGACTTGGCGGAGGAGACGAATCGCTCGTGCAG
CGTCTGCCTCGAAGAGCACGAGCTAGGAGAAAAAGTGGTCAAGCTGCCGT
GCGCTCATATCTTCCATCGAGATCGCGGCGCTTGACTTGGCGGAGGAGAC
GAATCGCTCGTGCAGCGTCTGCCTCGAAGAGCACGAGCTAGGAGAAAAAG
TGGTCAAGCTGCCGTGCGCTCATATCTTCCATCGAGCGTGTGTGTGGGAG
TGGTTGGAGCTCCACTGCACGTGCCCCGTGTGCCGCTTCGAGCTGGAGAC
TGAGGACGCCGCCTACGAGAGGGAGAGGAGGGTGCGTATGCAGGGCAGGC
GGCCGCGATACCGCCGGACAGAGCTGGACGGCCTCAGCATTCCTCAAATA
CGCAACCTCGCCCGGGGGCAGAACGTGAACATCGCCGGCTGCCTCGAGAA
GGCGGATATTGTGAGATGCCTCGTTGAATCTGGGACGCGTGTGTGTGGGA
GTGGTTGGAGCTCCACTGCACGTGCCCCGTGTGCCGCTTCGAGCTGGAGA
CTGAGGACGCCGCCTACGAGAGGGAGAGGAGGGTGCGTATGCAGGGCAGG
CGGCCGCGATACCGCCGGACAGAGCTGGACGGCCTCAGCATTCCTCAAAT
ACGCAACCTCGCCCGGGGGCAGAACGTGAACATCGCCGGCTGCCTCGAGA
AGGCGGATATTGTGAGATGCCTCGTTGAATCTGGGACGATCGAGCTCGTC
GACTCCGAGAAACCAACGTACGACGCCCGAGACCTCGCCAGCATGAGCCT
CAGGCAGCTCCGGTCCCTGATGCTCCAGGCCGGGATCGGAGTCGAGGGCT
GCCTGGAGAAGAACGACCTCCTGGAGCGCGTCATGTCCTCTCGCCTCGTG
ACCATCACGCACGGCGACGCTGGCGGCCCGCCTGCGGTGGGGTCTTTTCC
GCACCTGGCGCCGTCTTCTTCGACGTCCAACAGCGGAGGTTTCGAAGGCG
ACGGGGGTCGAGGCGCCGCCCGAGAGTCTGCGCCGTCGGAGACGGGAGCA
CCTTATGGAGCAGGGGCAGGAACTGGATGGGGAGGAGGAGGGGGAGGAGG
AGGTGGGGGAAGCGTGGAGGGAGGGTCGTCGGAGTCGGACCCGCGCATCC
GGCGAACCGCGGGGTGGTGGTGGGCTGGTCGCGGGCGTCGCGATGCGGGC
GGGACGGGGAATGCTGTGAGTTCGGAGGGGGGGACTCGCCGGCGGCGGCT
TGGCCGCAGCCGCCGCCGCCGCCGCCGCCACGACCGGCTGCAGCAGCAAC
GGCGGCGGCATCAGCCGTGCCTCTCGAGAGCATGTCTGTCAAGGAGCTGC
GGGAGATCACGAGCTCGCTGGGGGTCAGCACGGCGGGATGCTTGGAAAAA
CGGGATATGGTGGAGCGAATCAGGGCATGTGGGCGCTACCGGCAGGCAGG
GAGTGTTGATCGAGCTCGTCGACTCCGAGAAACCAACGTACGACGCCCGA
GACCTCGCCAGCATGAGCCTCAGGCAGCTCCGGTCCCTGATGCTCCAGGC
CGGGATCGGAGTCGAGGGCTGCCTGGAGAAGAACGACCTCCTGGAGCGCG
TCATGTCCTCTCGCCTCGTGACCATCACGCACGGCGACGCTGGCGGCCCG
CCTGCGGTGGGGTCTTTTCCGCACCTGGCGCCGTCTTCTTCGACGTCCAA
CAGCGGAGGTTTCGAAGGCGACGGGGGTCGAGGCGCCGCCCGAGAGTCTG
CGCCGTCGGAGACGGGAGCACCTTATGGAGCAGGGGCAGGAACTGGATGG
GGAGGAGGAGGGGGAGGAGGAGGTGGGGGAAGCGTGGAGGGAGGGTCGTC
GGAGTCGGACCCGCGCATCCGGCGAACCGCGGGGTGGTGGTGGGCTGGTC
GCGGGCGTCGCGATGCGGGCGGGACGGGGAATGCTGTGAGTTCGGAGGGG
GGGACTCGCCGGCGGCGGCTTGGCCGCAGCCGCCGCCGCCGCCGCCGCCA
CGACCGGCTGCAGCAGCAACGGCGGCGGCATCAGCCGTGCCTCTCGAGAG
CATGTCTGTCAAGGAGCTGCGGGAGATCACGAGCTCGCTGGGGGTCAGCA
CGGCGGGATGCTTGGAAAAACGGGATATGGTGGAGCGAATCAGGGCATGT
GGGCGCTACCGGCAGGCAGGGAGTGTTG
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