mRNA_P-fluviatile_contig13.1818.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1818.1
Unique NamemRNA_P-fluviatile_contig13.1818.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 2.370e-119
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 1 
Query:    1 MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            MV+F+DKQVDELKKLW NKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDG+ISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA
Sbjct:    1 MVDFVDKQVDELKKLWHNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 183
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA)

HSP 1 Score: 315 bits (808), Expect = 4.550e-104
Identity = 154/182 (84.62%), Postives = 171/182 (93.96%), Query Frame = 1 
Query:    4 VEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            ++ +DKQV ELKKLW NKRQLAFQGLNLAMIVLSALMIWKSLMVVT+SESPVVVVLSGSMEPAFQRGDILFL+N D+P+R GEVVVFKIKDR+IPIVHR+M VHEKPDGT+ VLTKGD+N+V+DRGLY PGQ+WL REDILGRARG LRYVGMVTI+LNDYP LKYVLVG+MGLFVLTN+EA
Sbjct:    1 MDIVDKQVVELKKLWKNKRQLAFQGLNLAMIVLSALMIWKSLMVVTRSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRIMKVHEKPDGTVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRARGALRYVGMVTIVLNDYPALKYVLVGIMGLFVLTNKEA 182
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK)

HSP 1 Score: 300 bits (769), Expect = 3.720e-98
Identity = 150/183 (81.97%), Postives = 166/183 (90.71%), Query Frame = 1 
Query:    1 MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            M+E I++Q+DELKKLW NKR LAFQ LNLAMIV SALMIWKSLMV T+SESPVVVVLSGSMEPAFQRGDILFL N  +P+RAGEVVVFKIKDREIPIVHRVM VHEK DG +  LTKGD+N+V+DRGLY PGQ+WL REDILGRARGTLRYVGMVTIILNDYP LKYVLVG+MGLFVLT++E+
Sbjct:    1 MMELIEQQLDELKKLWKNKRALAFQALNLAMIVFSALMIWKSLMVWTQSESPVVVVLSGSMEPAFQRGDILFLTNHQDPIRAGEVVVFKIKDREIPIVHRVMKVHEKGDGAVEALTKGDNNRVDDRGLYAPGQLWLGREDILGRARGTLRYVGMVTIILNDYPVLKYVLVGIMGLFVLTSKES 183
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A7S0SWE0_9STRA (Signal peptidase I n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE0_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.340e-96
Identity = 145/182 (79.67%), Postives = 162/182 (89.01%), Query Frame = 1 
Query:    4 VEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            +  +  Q  ELKKLW NKRQL+FQGLNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFL+N D+P+R GE+VVFKIKDR+IPIVHRVM VHEK DG I VLTKGD+N+V+DRGLY PGQ WL REDILGRARGTLRY+GMVTIILNDYP LKYVL+G+MGLFVLTN+E+
Sbjct:    1 MNIVKNQAFELKKLWKNKRQLSFQGLNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVMKVHEKADGKIEVLTKGDNNRVDDRGLYAPGQQWLQREDILGRARGTLRYLGMVTIILNDYPILKYVLIGVMGLFVLTNKES 182
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A7S3M735_9STRA (Signal peptidase I n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M735_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.320e-96
Identity = 144/182 (79.12%), Postives = 164/182 (90.11%), Query Frame = 1 
Query:    4 VEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            +E +  QV E+KKLW NKRQL  Q LNLAMIV SALMIWK LMVVTKSESPVVVVLSGSMEPAFQRGDILFL N D+P+RAGE+VVFKIKDR+IPIVHRVM VHEK DG++ VLTKGD+N+V+DRGLY PGQ+WL REDILGRA+GTLRY+GMVTIILNDYP LKYVL+G+MG+FVLTN+E+
Sbjct:    1 METVKNQVVEIKKLWKNKRQLTLQALNLAMIVFSALMIWKGLMVVTKSESPVVVVLSGSMEPAFQRGDILFLTNQDDPIRAGEIVVFKIKDRDIPIVHRVMKVHEKEDGSVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRAKGTLRYLGMVTIILNDYPVLKYVLIGIMGIFVLTNKES 182
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.430e-96
Identity = 146/183 (79.78%), Postives = 164/183 (89.62%), Query Frame = 1 
Query:    1 MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            M E +  QV ELKKLW+NKRQL FQ LNLAMIV SALMIWKSLMV+TKSESPVVVVLSGSMEPAFQRGDILFL N D P+R GE+VVFKIKDR+IPIVHRV  VHEKPDG + +LTKGD+N+V+DRGLY PGQ+WL+REDILGRA GTLRYVGMVTIILND+P LKY+LVG+MGLFVLTN+E+
Sbjct:    1 MWEIVQMQVFELKKLWANKRQLLFQSLNLAMIVFSALMIWKSLMVLTKSESPVVVVLSGSMEPAFQRGDILFLSNHDSPIRVGEIVVFKIKDRDIPIVHRVTKVHEKPDGKVELLTKGDNNRVDDRGLYAPGQLWLNREDILGRAVGTLRYVGMVTIILNDFPALKYLLVGIMGLFVLTNKES 183
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA)

HSP 1 Score: 286 bits (733), Expect = 9.540e-93
Identity = 142/181 (78.45%), Postives = 159/181 (87.85%), Query Frame = 1 
Query:    4 VEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 546
            +E ID Q+ ELKKLW NKRQ  FQ LNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFL+N D+P+R GEVVVFKIKDR+IPIVHRV+ VHEKPDG + +LTKGD+N+V+DRGLY  GQ ++ REDILGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E
Sbjct:    1 MEMIDAQISELKKLWRNKRQFLFQALNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRVLKVHEKPDGRVELLTKGDNNRVDDRGLYALGQQFIGREDILGRAVGTLRYVGMVTIILNDYPALKYVLVAVMGLFVLTNKE 181
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: F0YAE9_AURAN (Signal peptidase I n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YAE9_AURAN)

HSP 1 Score: 284 bits (726), Expect = 1.700e-91
Identity = 144/192 (75.00%), Postives = 161/192 (83.85%), Query Frame = 1 
Query:    4 VEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRAR-----------GTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 546
            +E +D+Q+ ELKKLW NKR L  QGLNLAMIV SALMIWK LM VTKSESPVVVVLSGSMEPAFQRGDILFL+N D P+R GEVVVFKIKDR+IPIVHRVM VHEK DG + +LTKGD+N+V+DRGLY PGQ+WL+RED+LGRA            GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E
Sbjct:    1 MEIVDQQIFELKKLWKNKRLLLHQGLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHRVMKVHEKADGAVELLTKGDNNRVDDRGLYAPGQLWLAREDVLGRAIRGGNKMIQGAIGTLRYVGMVTIILNDYPALKYVLVSIMGLFVLTNKE 192
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BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: W7TFR1_9STRA (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFR1_9STRA)

HSP 1 Score: 282 bits (721), Expect = 6.620e-91
Identity = 138/183 (75.41%), Postives = 159/183 (86.89%), Query Frame = 1 
Query:    1 MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 549
            M E +  Q+ ELKKLW + R L  Q LNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFL+N D+P+R GE+VVFKIKDR+IPIVHRV+ VH+K DG + +LTKGD+N+V DRGLY PGQ+WL+REDILGRA GTLRY+GMVTIILNDYP LKYVLVG+MGLFVLTN+E+
Sbjct:    1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183
[Close]
BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Match: A0A6U5HKR9_9STRA (Signal peptidase I n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HKR9_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.140e-89
Identity = 138/182 (75.82%), Postives = 156/182 (85.71%), Query Frame = 1 
Query:    1 MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 546
            M + IDKQ+ ELKKLW NKRQLAFQ LNLAMIV SALMIWK LM VTKSESPVVVVLSGSMEPAFQRGDILFL N +  +  G+VVVFKI+DR+IPIVHR++  H K DG + +LTKGD+N+V+DRGLY PGQ+WL REDILGRA G LRYVGMVTI LNDYP LKYVLVG+MGLFVLT++E
Sbjct:    1 MKDIIDKQIVELKKLWLNKRQLAFQALNLAMIVFSALMIWKGLMCVTKSESPVVVVLSGSMEPAFQRGDILFLDNSNPEVAVGDVVVFKIRDRDIPIVHRILKAHRKADGKVELLTKGDNNRVDDRGLYAPGQLWLEREDILGRAVGCLRYVGMVTIALNDYPVLKYVLVGMMGLFVLTSKE 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ0_ECTSI2.370e-11997.81Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A835Z4U9_9STRA4.550e-10484.62Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A6V1QND9_HETAK3.720e-9881.97Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S0SWE0_9STRA2.340e-9679.67Signal peptidase I n=1 Tax=Chromulina nebulosa Tax... [more]
A0A7S3M735_9STRA3.320e-9679.12Signal peptidase I n=1 Tax=Spumella elongata TaxID... [more]
A0A7S1U989_9STRA3.430e-9679.78Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S2RVP6_9STRA9.540e-9378.45Signal peptidase complex catalytic subunit SEC11C ... [more]
F0YAE9_AURAN1.700e-9175.00Signal peptidase I n=3 Tax=Pelagomonadales TaxID=5... [more]
W7TFR1_9STRA6.620e-9175.41Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A6U5HKR9_9STRA2.140e-8975.82Signal peptidase I n=1 Tax=Corethron hystrix TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1919384..1924408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.1
Seed ortholog evalue1.9e-95
Seed eggNOG ortholog2880.D8LRQ0
Preferred nameSEC11C
KEGG koko:K10686,ko:K13280
KEGG Pathwayko03060,ko04120,map03060,map04120
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005787,GO:0005789,GO:0006465,GO:0006508,GO:0006518,GO:0006605,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016485,GO:0016787,GO:0019538,GO:0031090,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0042175,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0098796,GO:0098827,GO:0140096,GO:1901564,GO:1902494,GO:1905368
EggNOG free text desc.signal peptide processing
EggNOG OGsCOG0681@1,KOG3342@2759
EC3.4.21.89,6.2.1.45
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSec11 homolog, catalytic subunit of the Signal Peptidase Complex
Ec32 orthologEc-12_000620.1
Exons5
Model size1319
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1818.1prot_P-fluviatile_contig13.1818.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1920151..1924408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.7287834-UTR-P-fluviatile_contig13:1919383..19201501622815567.7287834-UTR-P-fluviatile_contig13:1919383..1920150Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1919384..1920150 -
1693562275.8357887-UTR-P-fluviatile_contig13:1919383..19201501693562275.8357887-UTR-P-fluviatile_contig13:1919383..1920150Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1919384..1920150 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815567.7402773-CDS-P-fluviatile_contig13:1920150..19202051622815567.7402773-CDS-P-fluviatile_contig13:1920150..1920205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1920151..1920205 -
1693562275.8470402-CDS-P-fluviatile_contig13:1920150..19202051693562275.8470402-CDS-P-fluviatile_contig13:1920150..1920205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1920151..1920205 -
1622815567.7499988-CDS-P-fluviatile_contig13:1920881..19210121622815567.7499988-CDS-P-fluviatile_contig13:1920881..1921012Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1920882..1921012 -
1693562275.8556082-CDS-P-fluviatile_contig13:1920881..19210121693562275.8556082-CDS-P-fluviatile_contig13:1920881..1921012Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1920882..1921012 -
1622815567.7619026-CDS-P-fluviatile_contig13:1921572..19216181622815567.7619026-CDS-P-fluviatile_contig13:1921572..1921618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1921573..1921618 -
1693562275.8640108-CDS-P-fluviatile_contig13:1921572..19216181693562275.8640108-CDS-P-fluviatile_contig13:1921572..1921618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1921573..1921618 -
1622815567.772233-CDS-P-fluviatile_contig13:1922255..19224021622815567.772233-CDS-P-fluviatile_contig13:1922255..1922402Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1922256..1922402 -
1693562275.8731582-CDS-P-fluviatile_contig13:1922255..19224021693562275.8731582-CDS-P-fluviatile_contig13:1922255..1922402Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1922256..1922402 -
1622815567.7852995-CDS-P-fluviatile_contig13:1924235..19244081622815567.7852995-CDS-P-fluviatile_contig13:1924235..1924408Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1924236..1924408 -
1693562275.8824327-CDS-P-fluviatile_contig13:1924235..19244081693562275.8824327-CDS-P-fluviatile_contig13:1924235..1924408Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1924236..1924408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1818.1

>prot_P-fluviatile_contig13.1818.1 ID=prot_P-fluviatile_contig13.1818.1|Name=mRNA_P-fluviatile_contig13.1818.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=184bp
MVEFIDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSE
SPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHR
VMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLR
YVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA*
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mRNA from alignment at P-fluviatile_contig13:1919384..1924408-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1818.1 ID=mRNA_P-fluviatile_contig13.1818.1|Name=mRNA_P-fluviatile_contig13.1818.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5025bp|location=Sequence derived from alignment at P-fluviatile_contig13:1919384..1924408- (Porterinema fluviatile SAG_2381)
ATGGTGGAATTTATCGACAAGCAGGTGGATGAGCTCAAGAAGTTATGGAG
CAACAAGAGGCAGCTAGCGTTCCAGGGGCTGAACCTCGCCATGATTGTGC
TGTCTGCTCTGATGATCTGGAAGTCGCTGATGGTGGTTACCAAGTCGGAG
AGTCCTGTTGTGGTCGTTCTGAGGTGAGGCTCGTTCCAAATGTCGCGATC
TTTGGTCAGGTTGCAATCGGCTGCGCAACACACATGTGCGTGTTGATGAG
CGGCGGAGGGCTACGAAACTGCTGATGGGGTGTCCGGCGTCCCAGCCCTT
GTGTGTGCGGGCACGAGCGACAGCATCCCTGTGATCAGGAAGGTCGAGCA
GTGCCGCTGAGTAGCTGTGCCGCAGTCGCAACGATGAAGCTCACAGGAGC
TGGAGTCTTCGGGATGTGTTGGATGAGGGACCGCCGGTGACAGGCGTGTA
GTCGGCGGCAGGCAAACACCGCGGGTGCAGGAAGCCCCAGACGAGACCCG
ACATCTCTAATGCTGTGCGGGTCGTGGCAAGACACTCCCACGCGCCGAGG
ATAAGCCACTGGAAGGCAGCTCAGAAGATCCTGAATTATCTTCTGGGCAC
GGCACATCTAACTCTAAACTTTAAGCGGGATAGTTCGGTAGACGTAGAGA
CTTTGGTGTACGTAGATGCCGACTTTGCTAGCAAGGCCACTGACCGTAGA
TGGGTTTCTGGAGCGTTGGTTATTATGGCCGCAATGCTTGTCGTTTGGAT
TTCCAGGACGCAGAATTGCGTCGCTCAGTCGACTTCCGAAGCAGAGTACC
TAGCGATGGGTGATGGTGTAAAGGAGGCCCTGTTTGTGGACGGAATGCTT
CAGTTCTTGAGGCCTGTTTAATAGTACGCCCTAATCCGAGCATCATCTGT
TGTTCTTGGTCGATACTTCAGCGAGTTAGGCAGTGCAACTCCACGCGAGC
CGTGGCACGCGCACAGGAAAAGCTGAAATGTTGTCAATAAATCTCTCCGA
GTTCCCACGGGGAAATAATATCCGGACCAGCCAGTTAGGGAAGAGAATCG
TGCTGGCACGCGTACCGTTGTCACGCGGCTCCATCAAACACGAGCCTCCG
TCTGCACGCGAAAACATGCACAGAGCACATAAGATTGTAGATGGTTTGCC
TCCAGGTTTCAGAGCGTTTGTGTGTGTAAGAGAGAAGTGCTGAGGAGCGC
CTCTTGGCACGTATACTGTTTTGAGTCCCAACACTCCACGTAGCGAGCCT
CCACGCTGTATACTCGATATGCACCCCAAAGGGAGCGAATGGTCGACAAA
TTATTCGTGCCGGGATTGACAGACGCCACAAGCGCATAGTTGGAACACAG
TTCTGAGTGAGCCGCGTGTCGTTCGAATGTCCTTGAGGATGTTCCAGGTT
TACTGTTCGTTACCAGAGTCGTGCCCGTCAGCACCTACACCGCCGGAAGG
AGGACACAAAGGGACGACAAAGGGCCGTTCACCATCTGGTCTTGCATGCC
TCCGCGCTTTTGTTTGGGATGGCCCTCCCTCGTGATCGGACTCTCGAAGA
TGGGACGTATCGGACCGTACTGCACGCGATCCATCTGCTACAGTCCAGCC
CCCGCCCCCTTATTGTTAACCTCGAAGGATTGCCCCTGAGTAGTGGCGCA
GTGCCGCCCATCTCTCGACTGGACTCCCGCCTTCACTCTGCGAATTACGT
TGTATCTTGCCCGCAATATCCTCCGGCTTCTTGAGACGGTATTCGTTTGT
ACCACGTGTTATCTTGCATCAAGATACGGATGGCTCTGCTGTTCTTTCTA
GTGCATACTCAAAATACCGATGAAACCCCGTGAGACAAGTGCTTAGACAC
CACGGTCCTTTAGGAATGTCTCCGTCGCCACAAGACCGCGGATGCACACG
CGGCTAACAAGGTCTCCTGTGTCTAATCTTGCGCCTCTGTCTCTCCCCCT
CCCAATTCAACCACCAAATGCATGGTGTATGGTGGTTGCGATTGATGCCG
TCGCAGTGGTTCGATGGAGCCTGCCTTTCAGCGCGGGGACATCTTATTCC
TCCACAACGGTGACGAGCCGCTCCGGGCGGGTGAGGTGGTGGTCTTCAAG
ATCAAGGACAGGGAGATTCCCATTGTACACAGGGTCATGAACGTACACGA
AAAGTGAGGATTCGCGGCGATAGCTCGCCTCCGCTTTCCAAGCATCTTCC
TCATGGGTATTGCTTTTTGTGAGGGCTTACGCTTTATCCTAGATCCTCGG
CGCTACTTATGTGCTGTCCCAGTTGTCGGCAAGCACATGCTTGTTGTGAG
AAAGCCTTCTCTTGCCGGTGATCGTGATGAAGTGCTTCTTCGCGGCACCA
ATTGCGCCTCCCTGATTGTATGGTGGCTGCCTCAGGCATAAGCTCTTCGC
GTAATGACCTGCGGGCGCCTTGCGGGACGGTTGAATCCTTCATCGAAGGT
GCTAACTGCTGTATTAGTTCGGCCCGAGCGCCGACGTACTGCTTGACTTA
TCACATGTGTCATTCGAATCGTCTGTCTGATGGCTTGAAAGCCTGCTCAA
GAAAGGCTGCAACGGCCCCAACTTGCCTTAGGTTGACAACAAGCAGTAGT
ACCGTTCAGCCACGATTTTATTTTCAACTCCGTTCTCATTCCCCCGCAGA
CTTGCCAGCACAGGAAACCCGAGTGCGTCCCACTGCCATTCCACGTCTTT
GATCATGTTTACTGCTCCCCTGCTGTTTGCTGCCGTGTCCGCCATCCTGC
TGTTGTTGCTGGTGATCGAAACGGAACGAAAATGGGCCAGGCCGGACGGA
ACGATATCCGTCCTCACGAAAGGAGATAGCAACAAGGTAAGGACAGGAAC
CAAGACTCGCGGCCTCGCGTGAGCTGGGTCCGGCCATTCGTCGAATACCG
GCCCGGTATTGCTGCCGCGCACGGGACGCATCCCATGGTCGTGACGGTAC
AATGGGAGTGCGCAACAACACGCAAGAAGAGGACGCTGTGGTATTCCGCG
ACGGGTCCACCAAAAGTGAACCCCGTGTTGGACATGGTGGGAGCGGTCGG
CCCGGTTTTCCGTCCGAACTCTTGTCTTCTCGCTGCCCTGCCGGCCGCCA
CTCGACTGGCGTTGTCTTGCAACGGCAATTTCTTCTTGGCCGGCTTCCAC
TCTCGCCGATCGACACGGCTTCACTGCCCTTTCTCTCCGTTAGCGTCTAG
TGTCGTTGTATCTTCAATCATAAGCAGCTGCTGCAGCTGCTGCTGCAGCA
GCAGTATCGGCGGCGGGCCGTGCGCATGCTTGCGATGGACTTGACCCTCG
TGGCAAATTGCCTTGATGCCGCTGTAACTGCTCCGCGTTTCTGTTGCTAT
TTTGCACCATTTGTTGCTGCTGCAAAACAATTTTCGTATCGTGCAGGTGA
ACGACCGAGGGTTATATGTACCGGGACAGATGTGGCTGAGTCGGGAAGAT
ATTCTGGGCAGGGCCCGGGGCACACTGCGCTATGTGGGGATGGTGACCAT
CATCCTCAACGACTATCCACCGCTCAAGTGAGGAAGAAACGCAGTACCTT
GTTTTCGCTTGTGTGCTTTTTGACGCTGTTTTGGCGTTGATTCCTCCCTT
ATTTTCAGTAGCTTCCCTTTTTTTCTGTTATTTTTCGAGGTCGACTTAGG
GGCGTGAGCATGCCGCACGCCAATATTCGGCATTTTTTCGCGAGATTTGT
TATGGCCGGGATGGTAGAGAAGCCCTTCCCCACCGTTAGATACCACAGGC
CAACGTCATTTGGGCAAAGGGGATACCCCATCTACTCTCCCCTTTTGGGT
TTCCAATGGAAACTCTCAGTTTTTTAGTGCGGTTCTTCTCAAGTTTGAAG
AAGTTAGCAGAGTTGTCAAGGGAATTTTTGCTCGTCGCGATGGGTAAGGC
TGGAAGCACTCCGCACAAACTAGGTATCTGTGCGATTCGCTTGCTGATGG
TGGCGAAAAGGAAGGCTCACTCATCTCAAGGGGTGCGGGTGCGGATCTGT
CGGTGCTCTGCGCTCACGGATTTCGCATGTCACAAGCGCTTTGTGGGCAT
GTGTCTTGCTCGGCGCTTTACCCCCCACCTCTAGTGAGTAGGAAGCTTGC
CTCTCACGTGCCACGAAATCATGAAAGATTGCAAATAGACATACCAATGC
CTTTGGCAGACCGTTTTGCTCATGACCCTTCCGTCCTTGCGTTTCTCTCT
CAGGTATGTGCTGGTCGGGCTGATGGGCTTGTTCGTGCTGACCAATCGAG
AAGCATGATGACGCGGGGCGTGCTTGCCGATCCCGCGGGGCCGCGTGGAC
AGTCAGGTCGAAATAACAAGAGTAGCAAGGAAGGGGGAGCAGGGAGACGG
TAACGACAGCTCTATGCGTGTGCACGCGGGCCAGCGCGCGGCAGCCATGG
TGTGGTATGACGTGACGTGACACGTCACGCCGACAGGTTGCGCACGCCGA
GGCACAATTCAGTCGTGCGCTCACCCTTTTTGTGGCGATGACGAACACTT
GAACGGCGATAACTTTGAAGGAGAGGATGTGCTGGCTGGAGGGAGGCTGT
CTTCCTCGCACGGGAGCTTCCCCGTCAGGGCGCTTACCCGCAGGGAGGAT
CGATTGCGTGCTCCTGTAGGTATGCCCCCCGTCGTGCGGCATTTTCAACA
TAAATTTGCGCGAAGATGAGGCGGCACGCAATGACTTCGGGGAAGGTCGA
CTACGGAATTCGCGAGAACCGTTCTTATCGCCATGGGCTTCTGGTACCCA
AAATGAACTGTGCCCAGCCACGCATTAGGGGGAAAACTGTGTCTTGGCTG
AAAAATTGCAGATTTCGAGTTGCCACACTTGGCTCAAGAGTCCCCGCCCC
CCTTGGAGGAAGTGATGCACCATGTTCTCCTGCCGTCGACGCATTAATTT
TGTCGTGGTTCTTGTCAAGGGGCTGCATGGATGGTCAACCCAATTGGCTG
TCCAATCTCTCTTGTCTTCTTGAGCTGCTTGACCTTGTGGTCCACAACTT
CCGTAGCAAGCACACGTTCAACATG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:1919384..1924408-

>mRNA_P-fluviatile_contig13.1818.1 ID=mRNA_P-fluviatile_contig13.1818.1|Name=mRNA_P-fluviatile_contig13.1818.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1104bp|location=Sequence derived from alignment at P-fluviatile_contig13:1919384..1924408- (Porterinema fluviatile SAG_2381)
ATGGTGGAATTTATCGACAAGCAGGTGGATGAGCTCAAGAAGTTATGGAG
CAACAAGAGGCAGCTAGCGTTCCAGGGGCTGAACCTCGCCATGATTGTGC
TGTCTGCTCTGATGATCTGGAAGTCGCTGATGGTGGTTACCAAGTCGGAG
AGTCCTGTTGTGGTCGTTCTGAGATGGTGGAATTTATCGACAAGCAGGTG
GATGAGCTCAAGAAGTTATGGAGCAACAAGAGGCAGCTAGCGTTCCAGGG
GCTGAACCTCGCCATGATTGTGCTGTCTGCTCTGATGATCTGGAAGTCGC
TGATGGTGGTTACCAAGTCGGAGAGTCCTGTTGTGGTCGTTCTGAGTGGT
TCGATGGAGCCTGCCTTTCAGCGCGGGGACATCTTATTCCTCCACAACGG
TGACGAGCCGCTCCGGGCGGGTGAGGTGGTGGTCTTCAAGATCAAGGACA
GGGAGATTCCCATTGTACACAGGGTCATGAACGTACACGAAAATGGTTCG
ATGGAGCCTGCCTTTCAGCGCGGGGACATCTTATTCCTCCACAACGGTGA
CGAGCCGCTCCGGGCGGGTGAGGTGGTGGTCTTCAAGATCAAGGACAGGG
AGATTCCCATTGTACACAGGGTCATGAACGTACACGAAAAGCCGGACGGA
ACGATATCCGTCCTCACGAAAGGAGATAGCAACAAGGCCGGACGGAACGA
TATCCGTCCTCACGAAAGGAGATAGCAACAAGGTGAACGACCGAGGGTTA
TATGTACCGGGACAGATGTGGCTGAGTCGGGAAGATATTCTGGGCAGGGC
CCGGGGCACACTGCGCTATGTGGGGATGGTGACCATCATCCTCAACGACT
ATCCACCGCTCAAGTGAACGACCGAGGGTTATATGTACCGGGACAGATGT
GGCTGAGTCGGGAAGATATTCTGGGCAGGGCCCGGGGCACACTGCGCTAT
GTGGGGATGGTGACCATCATCCTCAACGACTATCCACCGCTCAAGTATGT
GCTGGTCGGGCTGATGGGCTTGTTCGTGCTGACCAATCGAGAAGCATGAG
TATGTGCTGGTCGGGCTGATGGGCTTGTTCGTGCTGACCAATCGAGAAGC
ATGA
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