mRNA_P-fluviatile_contig13.1806.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: D7FPJ4_ECTSI (Vacuolar sorting receptor, putative (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ4_ECTSI) HSP 1 Score: 163 bits (413), Expect = 8.580e-49 Identity = 79/104 (75.96%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 295 MDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCGRLGGARDGGFAKRDGAHVWVGVKIPVVMVSAAAGERLRAMMRLQKVVVKGLGEQLVDR 606
M + + F+RGE+PVVEK+LKAQ AGA VIV D+GGCDDGLVDCGRLGGARDGGFAKRDG H W GVKIP VMVSAA GER R MM LQK+VV+GLGEQLV R
Sbjct: 1 MAACVVLFERGEVPVVEKILKAQTAGAVGVIVVDNGGCDDGLVDCGRLGGARDGGFAKRDGVHAWSGVKIPAVMVSAADGERFRGMMLLQKIVVEGLGEQLVQR 104
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A835Z4S0_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S0_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.070e-45 Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 124 PLFHIHFCLGCPDPDREGSLVLALGPYHGIRDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCGRLGGARDGGFAKRDGAHVWVGVKIPVVMVSAAAGERLRAMMRLQKVVVKGLGEQLV 600
PL ++ FCL CPDP EGS V AL HG R F +G++I AVPN G+A+ LLN D++ IA DRG IP++EKVLK QAAGA ++ D+G C + + CGR GG +GGFA RD + W VKIP ++VS G R++A+M L+ + + G G+QLV
Sbjct: 40 PLQYVEFCLDCPDPHLEGSHVPALRAAHGQRAFNATGDIIYAVPNDGSAE-LLNPDEVAGHIALLDRGTIPLIEKVLKVQAAGAVGALLVDNGECSEDFMRCGRTGGVPEGGFAWRDQPYDWSKVKIPALLVSEKEGSRVKALMSLRSIFITGHGDQLV 197
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A482SJ43_9ARCH (PA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJ43_9ARCH) HSP 1 Score: 133 bits (335), Expect = 1.490e-35 Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 1
Query: 136 IHFCLGCPDPDREGSLVLALGPYHGIRDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCG-RLGGARDGGFAKRDGAHVWVGVKIPVVMVSAAAGERLRAMMRLQKVVVKGLG 588
I +CL CPDP EGS++ +L +G+ ++ V+GE++ VPN L N + IAF DRGEI +++KVLK Q A A V++ADDG C + CG R G ++GGFA D W+ V+IPVVMV++ +RLR M ++ V + GLG
Sbjct: 42 ITYCLKCPDPRSEGSILPSLNAKYGVDEYSVTGELVYCVPNYAEGPFLANDHQLSDRIAFVDRGEISLLDKVLKIQEANALGVVIADDGSCYEDFHYCGPRAGSLQEGGFAAYDNEQSWLAVEIPVVMVTSTNADRLRDAMGIKSVYIPGLG 193
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A7S2WGD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGD9_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.890e-23 Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 127 LFHIHFCLGCPDPDREGSLVLALGPYHGIRDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDG 417
L + FC CPDP EG+ VL LG G +++ V+G++ AVPN+ LLN ++ IAF DRG+IP+VEK+L AQ AGA V++ADDG C +G
Sbjct: 55 LRSLEFCRSCPDPHLEGTQVLGLGAAQGPKEYHVTGDMAYAVPNQMQQGALLNSMELSGKIAFVDRGDIPLVEKILLAQDAGAVGVVIADDGNCAEG 151
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A5D6YDE3_9STRA (Proline--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDE3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 9.710e-17 Identity = 61/168 (36.31%), Postives = 78/168 (46.43%), Query Frame = 1
Query: 133 HIHFCLGCPDPDREGSLVLALGPYHGIRDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCGRLGGAR-----DGGFAKRDGAHV-------------WVGVKIPVVMVSAAAGERLRAMMRLQKVVVKG 582
H+ FC C D EGS+V+ F V+ ++ A+PN G+ L N ++ IA F RG++ VV K AQAAGA A +V D CD G + C R G D R+ AH W+ V IPV MVSA G RLR+ M V V G
Sbjct: 683 HVLFCRDCADLLLEGSVVIPHQSPFNPTKFFVTSALVFAIPNDGSH-ALYNAHELQGKIAVFTRGKVSVVHKARVAQAAGAVAALVFDSDQCDPGAMHCHRTVGVSPLVGDDNNDRSRNAAHSRRIGPFHDDPPSEWLPVTIPVAMVSADDGARLRSFMDYVAVEVNG 849
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 3.120e-12 Identity = 46/112 (41.07%), Postives = 59/112 (52.68%), Query Frame = 1
Query: 214 RDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCGRLGGARDGGFAKRDGAHVWVGVKIPVVMVSAAAGERLRA 549
R FKV EV+ A P ++ L NG + + I RG+IP+V KVL AQ AGA VIVADDG C G G+A D W+ V++PVV++ ERL A
Sbjct: 78 RSFKVKSEVVVAQPADARSE-LENGRFVRNRIVVVQRGDIPIVHKVLAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTA 188
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A2R5GKD5_9STRA (PA domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKD5_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.270e-9 Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 1
Query: 202 YHGIRDFKVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGE-IPVVEKVLKAQAAGATAVIVADD-GGCDDGLVDCGRLGGARDG-----GFAKRDGAHVWVGVKIPVVMVSAAAGERLRAMMRLQKVVV-KGLGEQLV 600
+HG + V G + AVPN + ++NG + + RG + ++EKVL+ Q AGA+AVI+ D+ GCD+ CG G R GFA +D A W V+IP +++ +L L + + +G GE +
Sbjct: 31 HHGPVKYHVDGRLAIAVPNDAR-EAIINGHQVKDRLTLVYRGGGVTLLEKVLRVQEAGASAVIIVDEEDGCDENFY-CGPFLGQRPADRLSLGFAHQDLASSWRSVRIPAILIRREDALKLTRWENLGTITLPEGKGEHRI 169
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Match: A0A1I0Q173_9GAMM (PA domain-containing protein n=3 Tax=unclassified Luteibacter TaxID=2620188 RepID=A0A1I0Q173_9GAMM) HSP 1 Score: 53.9 bits (128), Expect = 5.180e-5 Identity = 51/156 (32.69%), Postives = 68/156 (43.59%), Query Frame = 1
Query: 148 LGCPDPDREGSLVLALGPY-HGIRDF-------KVSGEVICAVPNKGNADVLLNGDDMDSAIAFFDRGEIPVVEKVLKAQAAGATAVIVADDGGCDDGLVDCGRLGGARDGGFAKRDGAHVWVGVKIPVVMVSAAAGERLRAMMR-LQKVVVKGLG 588
LG PD R + A+G Y + F +G V AVPN G A + N + +A DRG K L AQAAGATAV++A++ + G GG V IPV++VS G +L+A + L V KG G
Sbjct: 262 LGLPDVYRVTAPAAAVGEYGYAQASFGPTATASNFTGSVAQAVPNDGCA-AITNASAVAGKVALIDRGSCDFTVKSLNAQAAGATAVLLANN-----------QAAGVTPGGTPASP-------VNIPVILVSQVDGAKLKANLAGLTGSVGKGTG 398 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1806.1 >prot_P-fluviatile_contig13.1806.1 ID=prot_P-fluviatile_contig13.1806.1|Name=mRNA_P-fluviatile_contig13.1806.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=204bp SSNSRSSDSRSRTSGISSTRRDPQGKIRAAWGGSSRADTGFPLFHIHFCLback to top mRNA from alignment at P-fluviatile_contig13:1832456..1834679+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1806.1 ID=mRNA_P-fluviatile_contig13.1806.1|Name=mRNA_P-fluviatile_contig13.1806.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2224bp|location=Sequence derived from alignment at P-fluviatile_contig13:1832456..1834679+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1832456..1834679+ >mRNA_P-fluviatile_contig13.1806.1 ID=mRNA_P-fluviatile_contig13.1806.1|Name=mRNA_P-fluviatile_contig13.1806.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1224bp|location=Sequence derived from alignment at P-fluviatile_contig13:1832456..1834679+ (Porterinema fluviatile SAG_2381)back to top |