mRNA_P-fluviatile_contig13.1788.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: D8LRK4_ECTSI (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK4_ECTSI) HSP 1 Score: 298 bits (762), Expect = 4.230e-97 Identity = 144/169 (85.21%), Postives = 157/169 (92.90%), Query Frame = 1
Query: 1 MASPGRSWRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
MA P R+WRFDL+ G EAPK+LA+PLG++PGALI+DDDA+GPSALAQENLKKKRAMEIA+GPGK++LMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAI VH FR+VDDGK SLLLPKLIFCA+NF GVCVALWKMAKMGLLPVTAADWTSYLVPKHAIE SGVPL
Sbjct: 1 MAPPERTWRFDLNPGPGEAPKSLARPLGFNPGALIDDDDATGPSALAQENLKKKRAMEIALGPGKSILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILSVHSVFRTVDDGKISLLLPKLIFCAVNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 169
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A6H5JF63_9PHAE (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF63_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.090e-56 Identity = 102/150 (68.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query: 169 MEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGA-------------------------------------FRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
MEIA+GPGKT+LMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAI GVH FR+VDDGK SLL+PKL+FCALNF GVCVALWKMAKMGLLPVTAADWTSYLVPKHAIE SGVPL
Sbjct: 1 MEIALGPGKTILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILGVHNGMPSSTILRTIPAMPTAHAPAQPAMSSPCPRFPQTYAVFRTVDDGKISLLMPKLLFCALNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 150
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A7S2FYU7_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU7_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.020e-46 Identity = 89/168 (52.98%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 10 PGRSWRFDL--HSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
P +WRFDL + + PLGY PGA IE+ + + K AM IA GPGK ++MNGFMMYMSG+ I+IFSIMIT MG+ NP AI V+ AF VDDG + +PKLIFCALN +CVALWK MGLLPVT+ADWTSYL+ K E SG+P+
Sbjct: 7 PDGAWRFDLVPTEADHKILRECEGPLGYDPGA-IEEKETEEKKQGSLSKRKAAMAMNIATGPGKQIMMNGFMMYMSGSQINIFSIMITAMGLWNPINAIVNVNKAFVKVDDGSHDCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSYLIEKTNDEMSGIPI 173
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.460e-42 Identity = 82/166 (49.40%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 16 RSWRFDLHSGSMEAP--KTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
+ W DL E + PLG+ AL+E D A+G + LK K AM+IA PGK +LMNGFMMYM+G+ I+IFSIM+ M + NP AI G++ AF VDDG L++PKLIF LN +CV LWK +MGLLP+T+ADWTSYL+ K + SGVP+
Sbjct: 7 KRWTVDLVPNPSEHAIIREAVNPLGFDLNALVEVD-AAGKKEKDLKGLKTKMAMDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPI 171
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A7S2SV60_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV60_9STRA) HSP 1 Score: 154 bits (389), Expect = 3.220e-41 Identity = 83/165 (50.30%), Postives = 104/165 (63.03%), Query Frame = 1
Query: 16 RSWRFDLHSGSM--EAPKTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVP 504
R+W F L G E K + PLGY + + D ++ A + LK K A +A PGK +LMNGFMMYMSG+ I+IFSIMIT MGI P AI G++ FR V+DG L +PKLIF ALN + VA+WK MGLLP+TAADWT YLV K +E +G+P
Sbjct: 13 RAWAFHLSRGGNDHELAKRIEAPLGYVVNYVPDKDVSTKTKADNRAALKSKIAFNMATAPGKQILMNGFMMYMSGSQINIFSIMITTMGIWTPINAIAGINKHFRRVEDGNVDLTMPKLIFFALNILSLGVAMWKCKAMGLLPITAADWTGYLVDKEMLEVTGIP 177
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A835Z218_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z218_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.170e-40 Identity = 84/169 (49.70%), Postives = 114/169 (67.46%), Query Frame = 1
Query: 1 MASPGRSWRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
MA+ GR W+FDL S P + KP G++ GA + + SA AQ +K +RAM++A PG+++ MNGFMMYM+G+ I+IFSIMIT M + + A + V+ AF S+DDGK L+ PK I+ ALN AG+ +AL+K+ +GLLPVT+ADWTS L K EHSG PL
Sbjct: 1 MAADGRRWQFDLRS---TPPGGIPKPPGFTMGASASRELETRSSA-AQLAMKNQRAMQVARMPGQSLFMNGFMMYMAGSSINIFSIMITGMVLSSAATGLMNVNKAFASLDDGKVKLMTPKAIYFALNVAGLALALYKLTSLGLLPVTSADWTSRLPLKALAEHSGAPL 165
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A6V1SRW4_HETAK (ER membrane protein complex subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SRW4_HETAK) HSP 1 Score: 138 bits (347), Expect = 3.490e-35 Identity = 80/169 (47.34%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 16 RSWRFDLHSGSMEAPKTLAKPLGYSPGALI---EDDDASGP--SALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
R W +DL S E K K + PG L E D+ G ++ LK KRA E A+ P K + M GFMM+MSG I+IFSIM+T M +NP KAI G+ AF +DG L +PKL F A+N GV ++K A MGLLP TAADW YL K +EHSGVPL
Sbjct: 5 RRWAYDLTLNSTE--KNALKDIPDPPGLLKSAGELDEMKGKMRDTAKEKELKMKRAQEFAMAPFKNIAMQGFMMWMSGKQINIFSIMMTAMAFLNPIKAIMGIDQAFARFNDGTLDLTVPKLTFVAVNLLGVGTGVYKCATMGLLPTTAADWQGYLAAKVPLEHSGVPL 171
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A1V9ZF01_9STRA (ER membrane protein complex subunit 4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF01_9STRA) HSP 1 Score: 134 bits (337), Expect = 7.270e-34 Identity = 78/167 (46.71%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 16 RSWRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQEN---LKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHSGVPL 507
R W +DL++G+ AP+ PLG + D+ + +A +N LKKKRA E+A P K + GFMM+MSG+ I+IFSIMIT M +NP KA+F ++GAF ++DDGK LL KLIF A NF + VAL+K MGLLP T++DWT L K A+E S +
Sbjct: 3 RKWAYDLNAGN--APE----PLGSNKHTF--DEPSGAVTAKGGDNTLELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEASSAAV 161
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A5D6XRF1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRF1_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.160e-33 Identity = 73/160 (45.62%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 22 WRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQE--NLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHS 495
WR +L+ + +P+G++ G + E ++ S + A +LKKKRAMEI + P K+++ GFMM+MSG+ ++IFSIM+T M IMN K++ + GAF SV+DG L+ PKL++ A N A V +A++K A MGLLP TAADWT L K AIE S
Sbjct: 15 WRVELNEARESDLPSRLEPIGFTRGFVAEKENNSAVAKTASNTLDLKKKRAMEIGMAPFKSLMQTGFMMWMSGSSVNIFSIMVTGMIIMNTFKSLLNLQGAFVSVNDGVVDLVQPKLVYVAGNLANVAMAVYKCANMGLLPTTAADWTWLLPIKQAIETS 174
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Match: A0A6G0XHH2_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHH2_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.410e-33 Identity = 76/160 (47.50%), Postives = 97/160 (60.62%), Query Frame = 1
Query: 16 RSWRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQENLKKKRAMEIAVGPGKTVLMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAIFGVHGAFRSVDDGKNSLLLPKLIFCALNFAGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEHS 495
R W ++L++ + LA PLGY+ + + + SA LK+KRA EIA P K +L GFMM+MSG+ I+IFSIMIT M I NP KA+F V+GAF ++DGK LL K F N + VAL+K MGLLP T+ADWT L K AIE S
Sbjct: 3 RKWTYNLNANT-----PLADPLGYNKHVVDVNSAVTTTSANDTLELKQKRASEIANAPFKGLLQTGFMMWMSGSSINIFSIMITAMAIFNPLKALFNVNGAFVGLEDGKTDLLQAKATFVIANLVAISVALYKCGTMGLLPTTSADWTWLLPVKQAIESS 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1788.1 >prot_P-fluviatile_contig13.1788.1 ID=prot_P-fluviatile_contig13.1788.1|Name=mRNA_P-fluviatile_contig13.1788.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=170bp MASPGRSWRFDLHSGSMEAPKTLAKPLGYSPGALIEDDDASGPSALAQENback to top mRNA from alignment at P-fluviatile_contig13:1664969..1667693- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1788.1 ID=mRNA_P-fluviatile_contig13.1788.1|Name=mRNA_P-fluviatile_contig13.1788.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2725bp|location=Sequence derived from alignment at P-fluviatile_contig13:1664969..1667693- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1664969..1667693- >mRNA_P-fluviatile_contig13.1788.1 ID=mRNA_P-fluviatile_contig13.1788.1|Name=mRNA_P-fluviatile_contig13.1788.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1020bp|location=Sequence derived from alignment at P-fluviatile_contig13:1664969..1667693- (Porterinema fluviatile SAG_2381)back to top |