prot_P-fluviatile_contig1.78.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.78.1
Unique Nameprot_P-fluviatile_contig1.78.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length172
Homology
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BLAST of mRNA_P-fluviatile_contig1.78.1 vs. uniprot
Match: D7FJJ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ8_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 6.800e-79
Identity = 132/171 (77.19%), Postives = 146/171 (85.38%), Query Frame = 0 
Query:    1 MDLPGPIRIMEEDVSHVTKQRELAAYMASSIYFITPKYSVKDVERYSDGLQSVGLHGQQSLASQLSAGMKRYLPPELTDRPAMGAARAAGKPADLTPLPAFDGKSLTALEDKERQSAETAGAKKDKDQDDAAMMSDVEAEVEEDEQDDDYAVDHYESGEESAGDDEPAAVF 171
            MDLPGPIRI+E+DVSHV KQRELAA M+ SIY+ITPKY+VKDVERYSDG+ S G  GQ SLASQLSAGMKR+LPPELTDRPA+G   A GK   L PLPAFDGKSLTALEDKER+SAET GA+K+KD++DA M+SDVEAEVEE     DYAVDHYESG ES GDDEPAAVF
Sbjct:   15 MDLPGPIRILEDDVSHVAKQRELAADMSKSIYYITPKYAVKDVERYSDGVHSGGYRGQ-SLASQLSAGMKRHLPPELTDRPAIGTTAAGGKLPGLKPLPAFDGKSLTALEDKERKSAETGGAEKEKDKEDAGMLSDVEAEVEEXXXXXDYAVDHYESGNESGGDDEPAAVF 184
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJJ8_ECTSI6.800e-7977.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024661DNA-directed RNA polymerase III, subunit Rpc31PFAMPF11705RNA_pol_3_Rpc31coord: 3..155
e-value: 1.0E-7
score: 32.5
IPR024661DNA-directed RNA polymerase III, subunit Rpc31PANTHERPTHR15367DNA-DIRECTED RNA POLYMERASE IIIcoord: 11..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:1159180..1159695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.78.1mRNA_P-fluviatile_contig1.78.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 1159180..1159725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.78.1 ID=prot_P-fluviatile_contig1.78.1|Name=mRNA_P-fluviatile_contig1.78.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=172bp
MDLPGPIRIMEEDVSHVTKQRELAAYMASSIYFITPKYSVKDVERYSDGL
QSVGLHGQQSLASQLSAGMKRYLPPELTDRPAMGAARAAGKPADLTPLPA
FDGKSLTALEDKERQSAETAGAKKDKDQDDAAMMSDVEAEVEEDEQDDDY
AVDHYESGEESAGDDEPAAVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024661RNA_pol_III_Rpc31