mRNA_P-fluviatile_contig13.1740.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 940 bits (2430), Expect = 0.000e+0 Identity = 574/927 (61.92%), Postives = 643/927 (69.36%), Query Frame = 3
Query: 90 MVQPSSNGMMVAGSQGKHAGGVLISEIGRLEDLQPGQIVLDRRHSLSSASTQSDETSLTSSHDSAGSMVSDTDLVPSVGGAGSGVAGAETRGAADAANVVPAQMGGSKRPLTPTDEEQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGQQLRKACDLCTKRKRKCNGLHPCSQCIETGVRNQCIYSPRLKSGRKKKVRIDGVLYEEGPYGGGLALVANGGGGARRHTAAVDPSMGRFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEVLSPAVSSRGLAMANPIKQPESRRQAKLAVFWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGSEGKLLKDRSEQDKSLDLVFQIYDQPDGCVSGFHRSAAVGGEWRRDRKLSLSSSSSSSWXXXXXXXXXSEDVNGESATSAVEQMVAQAMAPPSDSQSSPLKALKYLSKACGLSSEVFDPTNKCVTVKQYLAEMDSALKGANSLFAATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAATTLAHFGRGDTYMRLRATFNKHTFPGTEMPPIESYAPGSVCPQNGGTCSKLAYWLQVRGGMCAMLEWQPHISNGNLSQAHENAAYAAALEQARSCGEKTKSHGATAAQM---SMDVFQPSVSNPV--VNGADLVDG-SPLRAALDAGLNEITAHFDHTSSLGILGGSDIDLGIG----DDFDLSQLTQEPPEDHTLATMRVVNGVDPEAEVNAGA-CHAIGAAGIAAAVARDEQXXXXXXXQLPEVQGL--VNTVQIPADLDTGRGGRA-AAGGAGAGANTACGTGAFPGGAVTTGGGELFRETSFGISEPTAVSSVMG 2828
MVQP+ GM++ + GG L+SEIG+ LQ + + S SS ++ D SL S HDS GSM+SD+ V S GG G G+ T A+ +N G +KR L+ DEEQ S GQQLRKACDLCTKRKRKCNG HPCSQC ETGV NQC+YSPRLKSGRKKK RIDGVLYEEG YGG LA G G RR+ VDPS GRFSAS AVGLAGHVENFFLATYLRDFNR+VPLTTES VTEGMLEVLSPAVSSRGLA ANPIKQPE+RRQA+LAVFWGVVAMGSRILGA DESTVRYLGLMR+ALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNA+G EGKLL+DRSEQD SLDLVFQ+YDQPDG VSGF+RS AVG +WRR++ + S +S + TSAV+QM+AQA++PPS+ QSSPLKALKYLS CGLSSEVFDPTNKCVTVKQYLAEMDSALKGA+SLF ATDL EC+TGV++VKI+GGVT++MRSWG+LEDR+IGLAQVEEGVGYALTRPGLFTFPMWWHALHCAA LAHFGR DTYMRLRATFNK TFPGTEMP IE Y+P SVCPQ GG CSKLAYWLQVRG MCA LEW+P S LS A ENAAYAAALE+ SCG+ K GA + + + V NPV V+ +D+V+G S LRAAL+AGL EI F+ L IL GS DL +FDLSQL E PE A+ A+GA + AA XXXXXX P G VN++QIPA L GR G + AG GAGA G V GGGE+ R SFGIS P AVSS+ G
Sbjct: 1 MVQPNGEGMVMIRDEIDSGGGSLLSEIGKQPQLQ--RRISKISSSSSSTTSDMDSHSLLSGHDSLGSMLSDSGSVSSSGG---GTRGSFTSVDAEGSN----SSGTNKRSLS--DEEQ----------------------------LRLVEQEQSHGQQLRKACDLCTKRKRKCNGKHPCSQCTETGVPNQCVYSPRLKSGRKKKFRIDGVLYEEGTYGGELARANPG--GVRRN---VDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVG-DWRRNQNATKGSPTSPEQTHSGGGSDSGKP------TSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCADLEWKPQFSRSRLSDASENAAYAAALERRYSCGKHKKRSGAAWCGERWGAAEAPKHPVPNPVDQVSASDIVEGGSQLRAALNAGLAEIGTPFNDLGGLDILEGSGADLXXXXXXXSEFDLSQL--ESPEQVVEASGEAEXXXXXXXXXXXXTGSPAVGATDVPAA-GSGXXXXXXXXPGXPGAGGAAAVNSMQIPAGLVAGRSGSSDVAGSRGAGA----------GAPVIIGGGEISRGPSFGISGPAAVSSIFG 863
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.620e-58 Identity = 149/446 (33.41%), Postives = 214/446 (47.98%), Query Frame = 3
Query: 792 HTAAVDPSMGRFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEVLSPAVSSRGLAMANPIKQPESRRQAKLAVFWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGSEGKLLKDRSEQDKSLDLVFQIYD-QPDGCVSGFHRSAAVGGEWRRDRKLSLSSSSSSSWXXXXXXXXXSEDVNGESATSAVEQMVAQAMAPPSDSQSSPLKALKYLSKACGLSSEVFDPTNKCVTVKQYLAEMDSALKGANSLFAATD-LGECVTGVMMVKIWGGVTVVMRSWGKLEDRNI------------GLAQVEEGVGYALTRPGLFTFPMWWHALHCAATTLAHFGRGDTYMRLRATFNKHTFPGTEMPPIESYAPGSVCPQNGGTCSKLAYWLQVR 2087
H V P F+AS A+GL GHVEN F+A Y+RD N +P+T+E V GMLE + + L AN RR AKLAVFWGVVA+GSRILGA RY + AALR+CFD +D VVQAYLLL ++ETM GN +RY+ A T+H A + + Q + L+ + Q++ + C + G N A +A +M+ + P+ AL+ ++ +V DP + C V +L +++A G + + L +CV V IW G+T+ M G+++ GL +V G+ A++RPGL TFP+WWH +HCAA TL H G Y R +A F+ H +PGT++PP +++ VC + C + WL R
Sbjct: 271 HGGLVHPLARPFTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLE------TGKSLVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH---ASLRAKSVQEQHQAQLEGLETLLQVFGARMCECDAVDEGPCTASG------------------------------ANTAVAAAACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMS--GRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGADN-LCRQYQAWLLRR 674
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.080e-39 Identity = 141/510 (27.65%), Postives = 207/510 (40.59%), Query Frame = 3
Query: 588 CTKRKRKCNGLHPCSQCIETGVRNQCIYSPRLKSGRKKKVRIDGVLYEEGPYGGGLALVANGGGGARRHTAAVDPSMGRFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEVLSPAVSSRGLAMANPIKQPESRRQAKLAVFWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGSEGKLLKDRSEQDKS---LDLVFQIY-----DQPDGCVSGFHRSAAVGGEWRRDRKLSLSSSSSSSWXXXXXXXXXSEDVNGESATSAVEQMVAQAMAPPSDSQSSPLKALKYLSKACGLSSEVFDPTNKCVTVKQYLAEMDSALKGANSLFAATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAATTLAHFGRGDTYMRLRATFNKHTFPGTEMPPIESYAP--GSVCPQNGGTCSKLAYWLQVR 2087
C + +R+CN PCS C+ G+ C YSP L + E Y GG F A A GL G +EN+FLA+YL+D + PL ES V GM++ + + AAL CFD D +VV+AYLLL T+ +M GN + KRY + T+H G A G++ +D S + L + Q Y D PD + V QM A SP+ AL+ + G +S+ D + C V+ L ++ A G ++ + L +CV ++ G+T+VM+ G+L +G+ +E G+ A+TRPGL TF +WWH LHCAA T+AH R DTY+RL+ +++HT PGT++P + Y GSVC + C + +WL+ R
Sbjct: 732 CDRMQRQCNAGQPCSTCVRLGL--ACTYSPDL------------LPLVEAVYHGGS-----------------------FRAGPATGLVGRLENYFLASYLKDLHGFTPLACESIVVRGMMQAFADRAA--------------------------------------------------AALGACFDEPDVQVVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLA----GQMREDSSWLESECALLQTLIQAYGPRLLDSPDAMRKPPDNPEGID----------------------------------------VPQMSLMAQR---GHVRSPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQ--GRLA---MGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVCGPDQ-YCQQFRHWLERR 1101
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 3.070e-10 Identity = 82/282 (29.08%), Postives = 113/282 (40.07%), Query Frame = 3
Query: 561 QQLRKACDLCTKRKRKCNGLHP-CSQCIE---------------------TGVRNQCIYSPR-----LKSGRKKKVRIDGVLYEEGPY--GGGLALVANGGGGARRHTAAVDPSMG----RFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEVL-----SPAVSSRGLAMANPIKQPESR---------RQAKL------AVFWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHA 1247
+Q K+C C KRKR C+ P CS CIE R SP + SG K + E Y GG LA V R V M R S+S A GL G EN FL + F I+PLTTES V M+EV+ A S G + + + E + R+ L + W +A+G+ + G E + Y+ L +L ECFD E +AYL++S + + G+E +RY+ A
Sbjct: 52 RQTYKSCTFCAKRKRACDSQRPRCSLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNT------RSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFG-ILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFA 326
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 9.620e-9 Identity = 66/246 (26.83%), Postives = 110/246 (44.72%), Query Frame = 3
Query: 567 LRKACDLCTKRKRKCNGLHPCSQCIETGVRNQCIYS------PRLKSGRKKKVRIDGVLYEEGPYGGGLALVANGGGGARRHTAAVDPSMGRFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEV--LSPAVSSRGLAMANP--------IKQPESRRQAKLAV------FWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYL 1238
+R++C C ++KRKC+G+ PCS+C+ +GV QC YS P+ + +++ R + L+ + GA + + + R SAS A GL G EN FL+ + +PLTT S + M+ + LS A G + +P + + ++L+ FW V +G+ + G+ E Y GL R AL + EV +A+ +L G+ + YL
Sbjct: 18 MRRSCCECGRKKRKCDGMAPCSRCLRSGV--QCTYSKRKPHQPQTQHQHQRRPRGPACMPS-------TELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVG-FLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYL 253
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 9.770e-9 Identity = 69/250 (27.60%), Postives = 103/250 (41.20%), Query Frame = 3
Query: 567 LRKACDLCTKRKRKCNGLHPCSQCIETGVRNQCIYSPRL----KSGRKKKVRIDGVLYEEGPYGGGLA-LVANGGGGARRHTAAVDPSMGRFSASSAVGLAGHVENFFLATYLRDFNRIVPLTTESCVTEGMLEVLSPAVSSRGLAMANPIKQPESRRQAKLA---------------------VFWGVVAMGSRILGADDESTVRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYL 1238
+RK+C C ++KRKC+GL PCS+C+ GVR C YS R + GR+ + R GP G A + G + + SAS A GL G EN FL+ + +P T+ S + M+ +++ R A P + S Q++ FW V MG+ G+ ES Y L R A+ D +V +A+ +L G+ A + YL
Sbjct: 18 MRKSCGACGRKKRKCDGLMPCSRCLRAGVR--CTYSKRKPHQPQLGRQHQRR------PRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVG-FMPFTSRSHIRGAMVRMMA-----RSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYL 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1740.1 >prot_P-fluviatile_contig13.1740.1 ID=prot_P-fluviatile_contig13.1740.1|Name=mRNA_P-fluviatile_contig13.1740.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=943bp MVQPSSNGMMVAGSQGKHAGGVLISEIGRLEDLQPGQIVLDRRHSLSSASback to top mRNA from alignment at P-fluviatile_contig13:1220345..1228724- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1740.1 ID=mRNA_P-fluviatile_contig13.1740.1|Name=mRNA_P-fluviatile_contig13.1740.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8380bp|location=Sequence derived from alignment at P-fluviatile_contig13:1220345..1228724- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1220345..1228724- >mRNA_P-fluviatile_contig13.1740.1 ID=mRNA_P-fluviatile_contig13.1740.1|Name=mRNA_P-fluviatile_contig13.1740.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5658bp|location=Sequence derived from alignment at P-fluviatile_contig13:1220345..1228724- (Porterinema fluviatile SAG_2381)back to top |