mRNA_P-fluviatile_contig13.1945.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1945.1
Unique NamemRNA_P-fluviatile_contig13.1945.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:3020687..3021981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size371
Cds size369
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815536.428229-CDS-P-fluviatile_contig13:3020686..30209371622815536.428229-CDS-P-fluviatile_contig13:3020686..3020937Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3020687..3020937 +
1693562171.5003605-CDS-P-fluviatile_contig13:3020686..30209371693562171.5003605-CDS-P-fluviatile_contig13:3020686..3020937Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3020687..3020937 +
1622815536.4401197-CDS-P-fluviatile_contig13:3021863..30219811622815536.4401197-CDS-P-fluviatile_contig13:3021863..3021981Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3021864..3021981 +
1693562171.5084708-CDS-P-fluviatile_contig13:3021863..30219811693562171.5084708-CDS-P-fluviatile_contig13:3021863..3021981Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3021864..3021981 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1945.1prot_P-fluviatile_contig13.1945.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 3020687..3021981 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1945.1

>prot_P-fluviatile_contig13.1945.1 ID=prot_P-fluviatile_contig13.1945.1|Name=mRNA_P-fluviatile_contig13.1945.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=123bp
IFPSAPRCLSQRYTLQALGTRHSGLGQGVLLCFSFSAVVGICRSFFAREH
LVLLSRPQHLVPALPRHTSSASMPLLLQVASLCRSSLPPLAEGGPTPVTP
SVHYTAIKSQRHRPSPVAISRAI
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mRNA from alignment at P-fluviatile_contig13:3020687..3021981+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1945.1 ID=mRNA_P-fluviatile_contig13.1945.1|Name=mRNA_P-fluviatile_contig13.1945.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1295bp|location=Sequence derived from alignment at P-fluviatile_contig13:3020687..3021981+ (Porterinema fluviatile SAG_2381)
ATATTCCCCTCAGCCCCTCGCTGCCTTTCTCAACGATACACGCTGCAAGC
CTTGGGCACGAGGCATTCGGGTCTTGGCCAAGGTGTGTTGCTTTGTTTTT
CTTTCTCTGCCGTTGTGGGCATCTGTAGGTCCTTTTTTGCACGTGAACAC
CTCGTGCTGCTGTCGAGGCCCCAACATCTCGTCCCTGCCCTGCCACGACA
TACCTCATCCGCCTCGATGCCTTTGCTGCTCCAGGTGGCATCGCTTTGCA
GGTGAAACGCTGATTTCGTATGGTAGTGCGAAATGTGCGAAACGTTTCGA
TTTTGCATCGGTCTAAGTTAAAATTCTTATTTTCTTGAACAGTACTTACA
GCAGGTGCGTAGCGCATTCGGTGTGGTATTTGACGTTGTTGGCGGGCACC
ATTCGAGTTGTCGCTTCGCTGGCATGCTCCGCCAACTGAGGCGGCTGGTC
AGACGATTGGTGAAACTGCTTTGATGGACATCAAAACTTGATTTCTATTC
GAAAGAACAGGTGTCAAACGGGTTAGAGCATGACTGGTAAAGGAAGGATG
AGCCGTGTGGCGAATTTCCTTGAGAACGACTGAGCGAGACGCACAACGTG
GCTGGATTCGCTGATAACCCCTACGGTTAATTCGCAGCCAGTGCATCGTG
GACGCCGGCTGCTCTGAAATATATGAAATATTACAGATGATCTCGCGGTC
AAGTGATTGCCGCGTCCTAAACGAATAGCCAGGGGGAGAGGTTACAGAGC
AAGTGAGGGGGGCACGCGAATCTGGCCATAATTTGAAGCATTTTGGAGGA
CAACGAACACACCACGACGTCTACTTCCCGTATTGACACACCTCTGCCGT
CTCGGAAGAGATCGTACATGTCCACGACACGAAAGCCTACCTCTCAGCAA
AAGCTACCGTGTTGAGATCGATTACTGTATGGACGTCGGAGAAAGTGAGC
TCGCTCGTTCGCACGCGAGAACAGCTAAGGATCACATTATGTCCCACGCG
ACGCCCGTGCCACACACACCACGCCACGAGCATTCAGCCTCCACAGCGAG
CCGTCGACCTCGCAAAGCGTTTCGTGCGAAACATCGACTCGAAAATACCA
AGAAAAATCAGTCAAGCTCCGTTGTCCGCGGCCACACCCTCGCCACCAAC
ACCAAGCTACGCCGCTCGGCCGAACAGGTCTTCGCTGCCTCCTTTGGCCG
AGGGCGGACCGACTCCTGTGACTCCCTCCGTCCACTATACTGCCATCAAA
AGCCAGCGTCATCGCCCATCTCCCGTCGCCATATCACGTGCGATA
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:3020687..3021981+

>mRNA_P-fluviatile_contig13.1945.1 ID=mRNA_P-fluviatile_contig13.1945.1|Name=mRNA_P-fluviatile_contig13.1945.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=738bp|location=Sequence derived from alignment at P-fluviatile_contig13:3020687..3021981+ (Porterinema fluviatile SAG_2381)
ATATTCCCCTCAGCCCCTCGCTGCCTTTCTCAACGATACACGCTGCAAGC
CTTGGGCACGAGGCATTCGGGTCTTGGCCAAGGTGTGTTGCTTTGTTTTT
CTTTCTCTGCCGTTGTGGGCATCTGTAGGTCCTTTTTTGCACGTGAACAC
CTCGTGCTGCTGTCGAGGCCCCAACATCTCGTCCCTGCCCTGCCACGACA
TACCTCATCCGCCTCGATGCCTTTGCTGCTCCAGGTGGCATCGCTTTGCA
GATATTCCCCTCAGCCCCTCGCTGCCTTTCTCAACGATACACGCTGCAAG
CCTTGGGCACGAGGCATTCGGGTCTTGGCCAAGGTGTGTTGCTTTGTTTT
TCTTTCTCTGCCGTTGTGGGCATCTGTAGGTCCTTTTTTGCACGTGAACA
CCTCGTGCTGCTGTCGAGGCCCCAACATCTCGTCCCTGCCCTGCCACGAC
ATACCTCATCCGCCTCGATGCCTTTGCTGCTCCAGGTGGCATCGCTTTGC
AGGTCTTCGCTGCCTCCTTTGGCCGAGGGCGGACCGACTCCTGTGACTCC
CTCCGTCCACTATACTGCCATCAAAAGCCAGCGTCATCGCCCATCTCCCG
TCGCCATATCACGTGCGATAGTCTTCGCTGCCTCCTTTGGCCGAGGGCGG
ACCGACTCCTGTGACTCCCTCCGTCCACTATACTGCCATCAAAAGCCAGC
GTCATCGCCCATCTCCCGTCGCCATATCACGTGCGATA
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