mRNA_P-fluviatile_contig1.50.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.50.1
Unique NamemRNA_P-fluviatile_contig1.50.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 1.270e-67
Identity = 162/396 (40.91%), Postives = 217/396 (54.80%), Query Frame = 3 
Query: 1299 EAQSGVKIPESRRTAFQRARRAGVARRAEEGGGGALDKGQGSGG----DDDSEDGHKRG----------------PTTWQAPAKIVNPLGFVAAEGSPEADKQR---------------------------------RQRRRQHPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEPSVVDFAQPGPEEIKKCADKVVLHLYYEYRPMFGGERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVY 2327
            EA +  ++P+ R+ +F+RARRAGVARR EEGGG   D   GSG     + DS      G                P TWQ P   V P  F+   G   AD ++                                 + ++ +HPVLG  VADL YKRVYV+S+EAL K  VW++ARTLR VHA EIF  K +EA+KLE+R++     E K E           ++T          K+NQ+Y+LG+VDGQHR+ AL +LA+  +WD S +NVVVEVFD KDE+ +EEL+ EINRAEP  +D   PGP+E+ KCA++VVLHLY                         ++ +G+IERHEL+ P LLLD+LLRVNEM+S+R+   W LM+G ++  Y
Sbjct:  362 EAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSG---ADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDE----------NLLT----------KRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIPGPQEVYKCAEEVVLHLY------------------------KLIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCY 710
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.400e-62
Identity = 151/334 (45.21%), Postives = 194/334 (58.08%), Query Frame = 3 
Query: 1257 PTAAGGERGVGAGGEAQSGVKIPESRRTAFQRARRAGVARRAEEGGGGALDK--GQGSGGDDDSEDGH----------------KRGPTTWQAPAKIVNPLGFVAAEGSP---------------------------EADKQRRQRRRQHPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEPSVVDFAQPGPEEIKKCADKVVLHLYYEYRP 2123
            PT A  +R      E  +  ++PE R+ +F+RARRAGVARR E+GGG   D   G GSG + DS                    +  P TWQ P   V P  F+A  G+                            E+    R     HPVLG  VADL YKRVYVTS+EAL K  VW++ARTLR VHA EIF  K +EA+KLE+R++     E K E  +   KGMPGVITL++RPLLPL K+NQ Y+LG+VDGQHR+ AL +LA+  +WD+S +NVV+EVFD KDE+ +EEL      AEP  +D   PGP+E+ KCA++VVLHLY + +P
Sbjct:  348 PTDAERKRAAADAAEEGTDPRVPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGSEADSXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLAGSGADGEKGGAAAGAEAKITGGXXKASSLAASESSSCERIVVEGHPVLGFLVADLKYKRVYVTSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVTEDGKEEKDENLV--AKGMPGVITLYRRPLLPLTKRNQSYVLGVVDGQHRLRALKMLADAKMWDQSERNVVIEVFDAKDERDIEEL------AEPVQIDLDIPGPQEVYKCAEEVVLHLYKDTQP 673
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A7S2XHN0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHN0_9EUKA)

HSP 1 Score: 145 bits (367), Expect = 2.240e-34
Identity = 97/283 (34.28%), Postives = 143/283 (50.53%), Query Frame = 3 
Query: 1569 HPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEPSVVDFAQPGP--EEIKKCADKVVLHLYYEYRPMFG-GERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWM 2408
            HPVLG  VADLGYK+VY  S+E+L   P+W+K R  R   A +I + KK          +V G              G PG +  ++          Q   +G++DGQHR+GA   +A  GL D  A NV+VEVF   D K  ++LF+EIN+AEP V     PG     IK   D  V  L+ E++ MF    +   P +N  + +E++  + +  R  L     LL +L+  N  +++ + + WE   G K       +S   AL+KA+R+NF+LGM+  W+
Sbjct:   94 HPVLGTLVADLGYKKVYRASLESLQNMPMWEKQRAYRDERAKKIAKDKK--------DSVVKG--------------GFPGCLVAYEF--------KQTRAIGLLDGQHRLGAQKHMAANGLCDPEANNVLVEVFQFNDGKQADKLFIEINKAEP-VKSIDMPGEVNPNIKVSIDDAVDELHDEFKAMFKVSSKCLAPHVNMDVLREDLFEADVCGRFNLKSKKELLAWLMAKNTEMAKLDDAAWEQRRGSKKP-----KSFGKALEKARRNNFFLGMDKQWL 340
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A5J4YNY4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNY4_PORPP)

HSP 1 Score: 140 bits (352), Expect = 1.270e-30
Identity = 89/282 (31.56%), Postives = 141/282 (50.00%), Query Frame = 3 
Query: 1569 HPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEP-SVVDFAQPGPEEIKKCADKVVLHLYYEYRPMFG-GERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWM 2408
            H V G  + D+GYK++Y+TSVE L++ P W K R  +   A+ + +            KI S                +PG+IT  Q       +    +IL   DGQHR GAL ++  +G W    ++++VEVF  + E   + LFVEIN+AEP   +D      E +          L   Y  MF   ER R P +NA + +  +  SG++ER+ +Y+ +  L +LL +N+ +S+     WE ++  K        +L  AL+KA++H+F+LG++ SWM
Sbjct:  355 HKVFGRALHDVGYKQIYMTSVEKLVQVPSWNKNRAYKPNRALAMAK-----------EKIASKST------------SLPGIITCCQL------EGGDTFIL---DGQHRRGALEIMLRKGAWPAGLESLLVEVFPIRSESDAKALFVEINKAEPVKTIDLPDVASEAVANALLYAAGELSSTYPTMFSDSERCRIPQVNADVLRNELFESGILERYHIYNGEDCLQFLLNMNKKMSKYTDQEWETLVKSK--------ALPKALEKARKHDFYLGIDKSWM 596
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A835Z013_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z013_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.730e-27
Identity = 112/428 (26.17%), Postives = 167/428 (39.02%), Query Frame = 3 
Query: 1476 QAPAKIVNPLGFVAAEGSPEADKQRRQRRRQHPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQ-----------------------------------RPLLPLRKKNQKYIL--------------------------GIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEP-SVVDFAQPGPEEIKKCAD----------------------------------------------------KVVLHLYYEYRPMFG-GERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWMLV 2414
            + PA +    G  AA  + E  K        H + G  V DLGYK++Y+TSVE L++AP+WQ+ R LR        RA+ + A+K+  +K                  GMPGVITL+Q                                      L L    +KY+                            IVDGQHRV AL +++E G WDK+A NV V+V  T DE+   +LF EIN+AEP  +VD   PG   +    D                                                    +    L   Y  M     R + P +N  +F++++  S ++ RH+L+    LL +L   N+ L QR+ + W   +  +    S+      ALKKA+ H F+LG++ +W+ +
Sbjct:   77 EVPAGVAEEAGTAAAASAQEVVKLE-----PHAIYGELVHDLGYKQIYLTSVERLVRAPIWQRQRILRPE------RAQAMAADKMRGKKF----------------NGMPGVITLYQDRQAEVSWECRLAHVNVDATRSAPRHKSWDTWCCNTARLRLYMSRRKYVSVWRGVRSADVDRRQQLICESSDPTDSAIVDGQHRVAALMIMSEAGAWDKAAHNVAVDVVPTSDEQEGCDLFTEINKAEPVRLVDM--PGEGAVAHLLDSDSDFDSWWYVPPSHATAQVXXXXXXXXXXXXXXXXXXXXXXXXXXQRAVLAEAAAALAEAYPAMVKQSSRCKAPHINLDVFRDDIFQSELMARHKLHTTAQLLAWLQEANDTLGQRDEAQWAQALSGRTTAASS-----AALKKARAHGFYLGLDKAWLHI 470
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A1Z5JSG0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSG0_FISSO)

HSP 1 Score: 126 bits (316), Expect = 5.280e-27
Identity = 95/320 (29.69%), Postives = 152/320 (47.50%), Query Frame = 3 
Query: 1473 WQAPAKIVNPLGFVAAEGSPEADKQRRQRRRQHPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKA---VEELFVEINRAEPSVVDFAQPGPEEIKKCADKVVLH-----LYYEYRPMFG-GERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSW 2405
            WQ    I      +      +  ++  Q +++HP+LG   A LGYK V++ S + L   PVW+K R  RH       RAK +  +KL+  K+                 GMPGVITL++         ++   L I+DGQHRVG +SLL E+ +      NV+VEV+    E      +++F+EIN+AEP V     PG   +    D+ +++     L   Y  MF   ++ R P+LN    ++ + ++ +I+RH L     L  +LL  N ++  +  S             + K    +AL KA+ H+F+LG++ SW
Sbjct:  151 WQQEVGIAKTSSVMEKSAQKDETQEETQSKQEHPILGMAHASLGYKSVHLVSAKDLADIPVWEKQRIYRHD------RAKAMAQDKLKTMKL-----------------GMPGVITLYE---------DRDGKLSIIDGQHRVGMMSLLNEQSVEGLDLDNVLVEVYKELAEYGEDHAKDIFLEINKAEP-VKLLDMPG---VATAKDRTIINRGAQLLMERYPSMFSPSQKCRVPNLNIDNLRDALFAANVIKRHSLTTASALEAWLLEQNAIMEAKYQS-----------DEAKKTVSVSALAKAETHSFYLGLDSSW 423
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A5J4YPW0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPW0_PORPP)

HSP 1 Score: 127 bits (318), Expect = 6.510e-27
Identity = 98/285 (34.39%), Postives = 145/285 (50.88%), Query Frame = 3 
Query: 1569 HPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEPSVVDFAQPG----PEEIKKCADKVVLHLYYEYRPMFGGE-RVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWM 2408
            H   G  VADLGYK+VY+ S+E L    VW++ R  R + A  I + K           I SG  ++           +PGVI+ ++         N +   GI+DGQHR GAL  +AE   W +S ++V+VEVF  K+E  ++ELF+EIN+AEP V+D   PG     EE K+  +  V  L  ++  MF    R RPP ++A   ++ +  S  + R+  +    +L+ LLRVN  +++   S W      KD +      L  ALKKA    F+LG++  WM
Sbjct:  232 HKHFGRLVADLGYKKVYLASIERLRGLDVWRRNRAYRPMRASAIAQDK-----------INSGWRKSV----------LPGVISCYECA------SNGE--TGILDGQHRRGALMYMAERSEWPES-KSVLVEVFQLKNEDQIKELFIEINKAEP-VLDVDLPGLSVADEEAKEAINYAVGQLEAQFEMMFKQTIRCRPPHVHADKLRDELFQSDFMGRYNAFTGKEVLESLLRVNSEMAECNYSSWVNKWNGKDYM------LKKALKKASDTGFYLGVDRQWM 479
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A4D9DI08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI08_9STRA)

HSP 1 Score: 119 bits (299), Expect = 6.240e-26
Identity = 87/288 (30.21%), Postives = 138/288 (47.92%), Query Frame = 3 
Query: 1569 HPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEP-SVVDFAQPGPE-EIKKCADKVVLHLYYEYRPMFGGERVRP--PSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWMLV*G 2420
            HPVLG  +AD+GYK+VY  ++  L   P+W+K R LR   A  I R K  ++  +++                      PG+ITL+Q     L  K  K    ++DGQHR+ AL +LA+ G+  K     ++EVF  + E     LF+EIN A P  ++D  + G   +IK   D  V  L  ++ P F    + P  P +N    ++ +    ++ERH       LL +L   NE LS +    W+ +   ++ +   K     A+ KAK+  F+LG++  W+ + G
Sbjct:   39 HPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKL----------------------PGIITLYQ-----LADKQYK----LLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPEGGARPDIKGIIDGAVDSLVSQF-PAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAAELLKWLQDANETLSTKHDRDWKRIFKGRNPLVIEK-----AVAKAKKGGFFLGLDNRWLALEG 289
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: A0A7S2WKL6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKL6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.210e-25
Identity = 94/294 (31.97%), Postives = 146/294 (49.66%), Query Frame = 3 
Query: 1572 PVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQR----PLLPLRKKNQKYIL-------GIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEPSVVDFAQPGP--EEIKKCADKVVLHLYYEYRPMFGGERVRP--PSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWM 2408
            P LG  + +LG K++Y+  + +L   PVW++ R  R   AV      K+ A+KL   K     +              PGVIT++ +    PL P +    K  L       GI+DGQHRVGA+  L  +G +D++   V+VEV++  +E+ V ELF +IN+AEP V D   PG   E  ++  +  V  L  ++ P F  E  +P  P++N    ++ +  S +I RH +     LL+ LL+ N+ LS+R  S W          Y+  +   TAL K +   F+LG+E  W+
Sbjct:  135 PFLGTCIGELGPKKLYLMDIPSLKSIPVWERQRVYRKERAV------KIAADKLSKLKSSGQPI------------SFPGVITIYAKGWVPPLSPEQIAGDKAALAAARDRYGILDGQHRVGAMRQLHRQGHFDET---VLVEVYELANEELVSELFTDINKAEP-VKDVDLPGSVNEVEREILNSAVSALAGQF-PAFFKESTKPRKPNVNFDNLRDAIFRSHLISRHGVRTDQQLLELLLQKNDELSRRPDSDW--------LTYNKSKGFPTALNKCRTQGFYLGLEEDWL 397
[Close]
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.410e-25
Identity = 83/286 (29.02%), Postives = 146/286 (51.05%), Query Frame = 3 
Query: 1569 HPVLGHFVADLGYKRVYVTSVEALLKAPVWQKARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGVITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVVEVFDTKDEKAVEELFVEINRAEP-SVVDFAQPGPEEIKKCADKVVLHLYYEYRPMFGGE-RVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNEMLSQREASMWELMIGHKDAVYSNKRSLAT--ALKKAKRHNFWLGMELSWMLV 2414
            HPV G  V DL YK++Y TSV+ L   P+W++ R         I+RA++ +        +++ +++AK  L+      +PG +T+++              +G++DGQHR+GAL LL + G+    A  ++VEVF  K ++ V+ LF EIN A+P S++D         K+   +    L  E+  MF      R P +N  + ++ +  S ++ R    +   LL+++   N++L+ R+ + W          Y  ++  A   A+ KA+ ++F+LGME +WM V
Sbjct:  107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQR---------IYRAERAQ--------LLANDIKAK--LQEGKALTLPGSLTVYE----------MGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWL-------RAYKGRKPEAVEKAVLKARDNHFFLGMEPNWMDV 356
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G9F9_ECTSI1.270e-6740.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDW4_9PHAE1.400e-6245.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XHN0_9EUKA2.240e-3434.28Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A5J4YNY4_PORPP1.270e-3031.56Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A835Z013_9STRA1.730e-2726.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JSG0_FISSO5.280e-2729.69Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A5J4YPW0_PORPP6.510e-2734.39Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A4D9DI08_9STRA6.240e-2630.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WKL6_9STRA1.210e-2531.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TLW5_9STRA1.410e-2529.02Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:809451..818463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue4e-65
Seed eggNOG ortholog2880.D7G9F9
EggNOG OGs2C3TE@1,2S2UE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-28_000790.1
Exons8
Model size3860
Cds size2403
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.50.1prot_P-fluviatile_contig1.50.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 810894..818449 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815279.446955-UTR-P-fluviatile_contig1:809450..8108931622815279.446955-UTR-P-fluviatile_contig1:809450..810893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 809451..810893 -
1693561379.0934858-UTR-P-fluviatile_contig1:809450..8108931693561379.0934858-UTR-P-fluviatile_contig1:809450..810893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 809451..810893 -
1622815279.5545988-UTR-P-fluviatile_contig1:818449..8184631622815279.5545988-UTR-P-fluviatile_contig1:818449..818463Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 818450..818463 -
1693561379.2677312-UTR-P-fluviatile_contig1:818449..8184631693561379.2677312-UTR-P-fluviatile_contig1:818449..818463Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 818450..818463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815279.4586499-CDS-P-fluviatile_contig1:810893..8109831622815279.4586499-CDS-P-fluviatile_contig1:810893..810983Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 810894..810983 -
1693561379.1155546-CDS-P-fluviatile_contig1:810893..8109831693561379.1155546-CDS-P-fluviatile_contig1:810893..810983Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 810894..810983 -
1622815279.4684317-CDS-P-fluviatile_contig1:811705..8118491622815279.4684317-CDS-P-fluviatile_contig1:811705..811849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 811706..811849 -
1693561379.1283424-CDS-P-fluviatile_contig1:811705..8118491693561379.1283424-CDS-P-fluviatile_contig1:811705..811849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 811706..811849 -
1622815279.4788463-CDS-P-fluviatile_contig1:812167..8122391622815279.4788463-CDS-P-fluviatile_contig1:812167..812239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 812168..812239 -
1693561379.1360776-CDS-P-fluviatile_contig1:812167..8122391693561379.1360776-CDS-P-fluviatile_contig1:812167..812239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 812168..812239 -
1622815279.488736-CDS-P-fluviatile_contig1:813736..8138241622815279.488736-CDS-P-fluviatile_contig1:813736..813824Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 813737..813824 -
1693561379.1433582-CDS-P-fluviatile_contig1:813736..8138241693561379.1433582-CDS-P-fluviatile_contig1:813736..813824Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 813737..813824 -
1622815279.5068262-CDS-P-fluviatile_contig1:815095..8152741622815279.5068262-CDS-P-fluviatile_contig1:815095..815274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 815096..815274 -
1693561379.1513941-CDS-P-fluviatile_contig1:815095..8152741693561379.1513941-CDS-P-fluviatile_contig1:815095..815274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 815096..815274 -
1622815279.5193622-CDS-P-fluviatile_contig1:815848..8158991622815279.5193622-CDS-P-fluviatile_contig1:815848..815899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 815849..815899 -
1693561379.1604035-CDS-P-fluviatile_contig1:815848..8158991693561379.1604035-CDS-P-fluviatile_contig1:815848..815899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 815849..815899 -
1622815279.5310097-CDS-P-fluviatile_contig1:816303..8165581622815279.5310097-CDS-P-fluviatile_contig1:816303..816558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 816304..816558 -
1693561379.1712732-CDS-P-fluviatile_contig1:816303..8165581693561379.1712732-CDS-P-fluviatile_contig1:816303..816558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 816304..816558 -
1622815279.5423326-CDS-P-fluviatile_contig1:816925..8184491622815279.5423326-CDS-P-fluviatile_contig1:816925..818449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 816926..818449 -
1693561379.1807065-CDS-P-fluviatile_contig1:816925..8184491693561379.1807065-CDS-P-fluviatile_contig1:816925..818449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 816926..818449 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.50.1

>prot_P-fluviatile_contig1.50.1 ID=prot_P-fluviatile_contig1.50.1|Name=mRNA_P-fluviatile_contig1.50.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=801bp
MFSSGIMQWGRYSLSSHPTSSRRNGAGLSQLATAVHRYIGDETADISVCC
VASASSAGVCRRPGTPFGAAATVTLHDNISSSTGEGYGLRLQPEQGMAPP
VERWELLLSQSARPPPRTSGFGGMVRVLGLEVGRGQRPILSPAASRAASA
SAVESRPAGVAATGARLGKRWLSTGPIYPGDEDTGGDDSDTDCSEFESTL
FARVDAPAKGEVSKAGKVHKTRAAGTNESDRSSAAADAPETSVHAAAVAE
GRSAAKNPKTRRSRNRRARKSEGKAPSSKVSDRAAEPAATRTAGTAPAAA
AVAGEGGAVVLGAAARKKPRRPRNRCASNSEGTAPSPPAASGSAAEPAFE
ERETPAAVAAAGGGVAAANSKPPKARKSRKRWPMTKSKTTTTIKPSLAAE
LAVLAEETAAAQGTPTAAGGERGVGAGGEAQSGVKIPESRRTAFQRARRA
GVARRAEEGGGGALDKGQGSGGDDDSEDGHKRGPTTWQAPAKIVNPLGFV
AAEGSPEADKQRRQRRRQHPVLGHFVADLGYKRVYVTSVEALLKAPVWQK
ARTLRHVHAVEIFRAKKLEAEKLEIRKIVSGEVEAKGELEIETVKGMPGV
ITLFQRPLLPLRKKNQKYILGIVDGQHRVGALSLLAEEGLWDKSAQNVVV
EVFDTKDEKAVEELFVEINRAEPSVVDFAQPGPEEIKKCADKVVLHLYYE
YRPMFGGERVRPPSLNATIFKENMLSSGMIERHELYDPDLLLDYLLRVNE
MLSQREASMWELMIGHKDAVYSNKRSLATALKKAKRHNFWLGMELSWMLV
*
back to top

mRNA from alignment at P-fluviatile_contig1:809451..818463-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.50.1 ID=mRNA_P-fluviatile_contig1.50.1|Name=mRNA_P-fluviatile_contig1.50.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9013bp|location=Sequence derived from alignment at P-fluviatile_contig1:809451..818463- (Porterinema fluviatile SAG_2381)
ACAGGGGTCCATTGATGTTTTCCTCTGGCATAATGCAATGGGGTCGATAC
TCCCTTTCCAGCCATCCGACCTCAAGTCGTCGCAACGGGGCAGGCCTAAG
TCAACTCGCGACCGCAGTTCATAGATATATAGGCGATGAGACAGCAGACA
TATCCGTCTGCTGTGTCGCGAGCGCGTCGTCGGCGGGAGTATGTAGGCGG
CCGGGGACTCCGTTCGGGGCAGCAGCGACAGTAACGTTGCATGATAATAT
CTCTTCTTCGACTGGAGAAGGGTATGGGCTCCGGCTGCAGCCGGAGCAGG
GCATGGCGCCCCCCGTCGAGCGCTGGGAGCTGCTGCTGTCGCAGTCGGCG
CGACCACCACCGAGGACATCGGGGTTTGGTGGAATGGTGCGCGTGCTGGG
ACTGGAGGTGGGTCGCGGACAGCGGCCTATTCTGTCTCCAGCCGCTTCCC
GCGCTGCCTCTGCTTCTGCTGTTGAATCACGCCCCGCCGGGGTGGCTGCC
ACCGGTGCTCGACTGGGCAAACGGTGGCTGTCCACCGGGCCCATCTATCC
TGGGGACGAGGACACCGGCGGCGACGACAGCGACACCGACTGCAGTGAGT
TCGAGAGCACGCTCTTCGCGAGAGTGGACGCTCCGGCCAAGGGGGAGGTC
TCGAAGGCCGGAAAAGTCCATAAGACACGCGCCGCTGGCACCAACGAAAG
CGACCGGTCCTCGGCCGCCGCCGACGCGCCGGAAACATCGGTGCACGCGG
CGGCGGTGGCAGAAGGGAGATCGGCGGCCAAAAACCCCAAGACCAGACGA
TCTCGCAACAGGCGCGCCAGAAAAAGCGAGGGCAAGGCGCCCTCCTCGAA
AGTGTCTGACCGGGCTGCTGAGCCAGCAGCCACTCGTACAGCAGGCACAG
CGCCAGCAGCGGCGGCGGTGGCAGGAGAAGGAGGTGCGGTAGTGTTGGGA
GCGGCGGCCCGGAAGAAACCCAGGAGACCCCGCAACAGATGCGCCTCCAA
CAGCGAGGGTACGGCGCCCTCTCCGCCCGCCGCTTCTGGGTCGGCTGCTG
AGCCGGCATTTGAAGAAAGAGAAACGCCGGCGGCCGTGGCGGCGGCAGGA
GGAGGGGTTGCGGCGGCCAACAGCAAACCCCCGAAGGCTAGAAAATCTCG
GAAGAGATGGCCCATGACGAAGAGCAAAACCACAACTACCATTAAGCCCT
CTCTGGCCGCCGAGCTAGCAGTCCTGGCGGAAGAAACTGCAGCAGCACAA
GGGACACCGACGGCGGCCGGAGGGGAGAGAGGAGTAGGAGCAGGAGGGGA
AGCGCAGTCGGGCGTCAAAATTCCCGAGAGCAGGAGAACCGCCTTCCAGC
GCGCGCGACGCGCTGGCGTCGCCCGAAGAGCGGAAGAAGGGGGTGGTGGG
GCGCTGGATAAAGGGCAGGGAAGCGGTGGCGATGATGACAGCGAAGATGG
CCACAAACGGGGGCCTACCACCTGGCAGGCACCAGCGAAGATCGTGAATC
CCTTGGGGTTCGTGGCGGCGGAAGGCTCGCCCGAGGCTGTGAGTACGAGT
GCATTTGCTCGGGCTACTGCCGCTGCTGCTGCTGCAAACACTTTGGTGAA
TCTTTCTGCTTGCTTGCCGACCTTTCGCCGACCTTTGAAAAACTGGAGAA
ACAAGAAACAAAAAACTACAACACCAAAAAACGGACAAGTGGCCGTTAAA
ACGTAGTTTCGCTCCCTCCACCTTTGCGGTTCTGCGCCTCCTTCTCCTAG
CTCTGTCTGCCTTGCGTAATTTCTTCGGCCTGCCGACCCCCGGGAATAGA
AAGCCGCTTGGTAGTATCTTAGTCTACTCCTCCTCGTCCTCGTCGTCGTT
CTCTTCTTCCTCGCCCTCCAATTCCTCTTCCGCCTCGCTGTGGGCGAGGG
GACAGGATAAGCAGCGGCGGCAGCGGCGGCGGCAGCACCCGGTGCTCGGG
CATTTCGTAGCAGACCTGGGTTACAAGCGCGTGTACGTGACGTCCGTGGA
GGCCCTCCTGAAGGCGCCGGTGTGGCAGAAGGCGCGGACGCTCCGCCACG
TGCACGCGGTCGAAATATTCCGGGCAAAGAAGCTCGAGGCCGAGAAGCTC
GAGATCCGCAAGATCGTGTCCGGCGAGGTCGAGGCTAAGGGGGAGCTGGA
GATCGAGACGGTATTTATTTATGGACGTCATACAATAAACCTTTCCCGTG
TGCGTGCCATCAACCAGACGCGACGCGCCCGCTTTTTCTAGTCTCGCCGC
CAATAGGCAAGTAGGCAGCTTACTTTCTGCGCCCCCCCCCCCCGCCCGCC
GGCCAGGTGCTGTGTTTTTGAAATACTAGCATTGCGTACCACTCTTGTGT
GTGGGTGAGTGCATTTTTTTCTGGCTGAGTCAAATCAAGAGCGTCGTGAA
CGAACGTTTTTGGAGAGACAGCAGCAGCAGTAGTGGCGGCAGGAGCGCCA
GCAGCAGCGGTAGCAGCGAAGTCGCGAAGCGTTTGCAGACATTTGACCTC
CCCTCTCCCTTCGTCACGCCTGCTGTTATCCTCTCGGTGTCTGATTTTCT
CGGCTGGCGACAAGGTGAAGGGCATGCCTGGGGTGATCACGCTCTTCCAG
CGGCCGCTGCTGCCGGTGAGAGCAAGAATGAGAGGCGTGCTTTTGTCCAT
GCTTTCGCCCACGTAGGCGCACAAACCCCGGGGATGCATGTCTTGTCGGA
ACATCTTGCCGGTGTGGGGCGACCGATTTGGAAACGTTCAAGTCGTCGGC
GGTACCGATCACTGGCTCTGGGGTAGCTTGAATTTTGGATGTTTGCGGGC
TCTTTGGTGCAGGTCGTCTCTTGTTCGTGCGCTTAGTTTTTCTTTGTATT
GTTGGTGCGGCTTTCCTCTGCTTGCTTATTGTTGGGTATCGGTGGTTTAT
GCACCTTGCACTCTGAGACCACGGTTTAGAAATACTTCGACGAATCGAGC
TAATTCGACAATATCAAGAGCACTGTTCTCATTCTCCTGCAGTCCCTTCC
TCTCAACCTTCCTTCGCTCCCTTTCCCTCACTCCGATTCTCTGCTTTCCC
CCTCTGTACCCCCCTTCCCCCCTCCCCCCCTGCCTCGGTACCCCCTTTCT
TCCTCTATTCCCTCTAACCTCCCTCCGTCTCTCCGTCCCTCCTTCTCTCC
GTCCCTCCTTCCCTCCTATCGCTCTATCGTCGGCGGTAGCTCAGAAAAAA
GAACCAAAAGTACATTCTGGGTATCGTTGACGGGCAGCACCGCGTAGGTG
CTCTGTCTTTGCTGGCGGAGGAGGGCCTGTGGGATAAGTCCGCGCAGAAC
GTTGTCGTGGAGGTGTTCGACACCAAGGACGAAAAGGCCGTCGAGGAGCT
CTTCGTCGAGATCAACAGGTGCGTACTGAGCCTCTGTCTGCAGGTGCAAG
AGGCGGAGGCGGAGTTCGGAGGGTAGTGAGGTGTTCTAAGCTGTAGGTGG
AGTTGGGCGCCGTAAATTGAAGTATGGGTGGAGTACGAGGCGGGGGGGGT
CTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCAT
CCCTACAAAGCCGGGACGGAGCACACCGGGTTCTCACCGGACCAGGCTCT
GGAGTACGAGGGCGGGGAACTTCGAGGCCGTAGGTGGAATGGAGGGGATG
TGAATAGAATGTAGGGTAGAGTTTTGGGGGGGTCGAGGCCGAAGACGGGG
TCGGAGGGGCGTCTGAGTTGCGGAATGGAGGGGACGTAAGAAGCATGGGT
GGAGTGGGAGGGGCGGGGAGGCATTGACGGAGTTGAGGGCCGCGTTCGAG
GCGTACATGGAGTGCGGAGGACGTTAGAGGAGTTGAACGCGGTTTGGGTT
GGGCAAGTCAGCCGCGGTGGTTTGTGGTATTTGCAGCGATCAATTGTGGA
TCAGCCATGTGTGCGGCAAGCTTCAAACCAGATCGGTCTGTTGCATTGCT
GCGAGTGAGAGCGAGCAGCGGCTTCCACTATCATTGTGATTGGTTGAGCC
GCGTCGTGCGGTTATTCCGATTGGTCAAGCCGCCTTCTGCGATCATTTCG
AATGATCAGGCCTCGAGTTCAATCGCTTTGATTGGTCTAGCCGCCTTCTG
CAGTCTTTTCGGTCAGTCGAAAGCCTCAAGACACTCAGGCACAAAATTGC
ATTTTCCTAGTTTTCACTCAAGGAACAAAAGGAAGCACTACAGTTCAGAT
TTAGCAGTAGAGTGTTTTACGGCATATAGTCCAATGCTGGTCTAGTGAAA
TTCGAAGGAGAAACAAGAAAATTTTGTGGCACTTTTTTGCTCTACTTTTT
GGGTTCACTTTGTTTGCGCCTGCGGCCAGGACGTCTTTCTCCTCGCTTGA
GCCAAGCCCAACCACCCTTTGCGGCTTTATCCTCCACCCTTTGCGGCTTT
TATCCTTCACCTTTTGCGGCTTTTATCCTCCTAGACCATCTCGTCGGCCT
TTTTGTCCCGATGGCCATGTACAACCCTTTTTTTTCTCGTTATCATCGTG
TACGGGAACACAACGTTAACTGCCTGCTCGGCTCGACTTGATCTGCCCGG
GCAGATAACGTTTGGTGTGGGTACATTGCCGTATGCATCCTCTCACCGTC
CCACCGAAATCAATAACACGTTTCTTGTGTTTTCTTCAGGGCGGAGCCGA
GCGTGGTTGACTTCGCTCAGCCGGGCCCGGAGGAGATCAAGAAGTGCGCG
GACAAAGTGGTCCTCCACCTGTATTACGTAAGTCCGTCTCTTCCATAAAA
GTCGAGAGCATTATCCCTCTGCTTTGTGCTAAGTCTTCAGCCACTCTTAA
TAATGCCATTATTTCGCTTGCTCTACTCCTCAGTGGTGACCGGCACTCTC
CCATGTCGCTCCAGGGACCCTGCCGTTATGTGCGTCTGGCTTTGTGCATG
CCTTACGGCTTCTCACCGCCAAATCCTTTTCTTTTTGTTGTGTGTCGGAT
TTTGTCGCAACCACGGGCTCTGGGCCGCTGTCGACCATGTGCGAAGCGCG
CGCGAAAGCAACATGATTCTGAGGCGCACAAGCAGATGATCACCCGAGTG
CGAAGATGCCTTCTGCGATGGGAATCCCCCAAGCCGCCATGAACACCCCC
AGGCGGATATTTGCCACTTTTGTAGTTGCCTCGTCGAAAGGAGAGACGTA
GATTTACATGACGGCCGCCGGGGACCGGAACGCAGGAAATTTGAGATTGC
ATAGGGATTAGGCAGTGGGGGGTACGTGACATCTCACCCTAACCCTGACC
CTAACTCCCTACTAATTCTGACGAGGTTAAGAAAATTTCCCACCATGCGT
GGGCTACTGATCACCGGGCGCACGGGCGGGCAAGGCGGGAGGGTCGGGGG
GCATACACGCCTTCGCGTTCTCAGTAGCTACCTTTGTGACTCTAAGTGGC
TGCCTCCGTCATTTGGCCAAAAAGTATGCATGCCTTGGGAGTCATTGCGG
GGGGAGGAAGCAGCGGTTTTTAGGGGGGTACACTGTTTGACGCTGTATAC
CAGACCCCCGTCGGCTTTTTTTAAAGCTCGATTGCCGCACTTCCAATTGG
GCGCTGATGCATAACGATACATTTTCGAAAAGCTCTCAATGAGGCTTCCC
AAAGTCGTCCTTTTCCGCCCTGGCACTAATCATAGAGTAAAGCTTTCGCG
GTTCGAAAAATCCCGGGGAGTCTGACATACCACGCCCAATTACGACGTGG
TTTCACGAACCGTGACCCAAGAAGCGCTGCACCTCCCTCGCCAACCTCGC
GGGAAAGGCCCTTTCCTACTTCCCTCCTTCCTTGTCGGCTTGAGTGGGTG
CCGAGATCTCGACGCTGTTTGTGCGTTGGCCACATTAGGCGCTATCCTTG
AGGACACCAGTGCATGAGGGCGTTGGTTGAGAGTAGCGAAGTGTCGTTTC
TCTACAAATTCGTCTTGAGCTATTTTTGCTTGTAGGGAATCGATTCGACG
GCACGCGCAACAGCAGTAAGGCCTTGACTTGTGCACGTGTGACATTTGAG
ATGACGGCGGCATGCCCTTAAGTATAACGTTGCGTTTCCAATGGGCACGG
CCAGCGCGTTTTGTACTCCGGTCGGAGAGTGGGGAGGAGGGGGGGGCACC
TGTACAGACTCGATTGAAGTTCTCCCTCAGCCAATCGCATCGAGCCCCCG
GCCCGACCGCTCTATCGTGTTCCTTGCGGGTTTTTTTTCGGCGTTGGTCT
CCGTGTTTTGTGTGTTGTCGTCAGGAATATCGGCCAATGTTCGGCGGCGA
GCGTGTTCGCCCACCGAGCCTCAACGCTACCATCTTCAAGGAGAACGTGA
GAACTCCCGCAGTGGAACTGCTTGCTTCGCCTGATTTTTTCCTGCTTGGC
CTGCTTGACCTCATCGGCCTGCTCTGCTCTGCTCTGCCCTGCTCTGCCCT
GCTCTGCTCTGTGCCTTCACCTTGCTCTGCTGTGCGTTTGCTTCGTCTGC
TATACTTTTGCCTCTGCTCTGCTTGGCTTTCACTTTGCAACGTTTTGTTT
TTCTTATCGTTTGTTGTCGTCGCTTGAAATCGCGTGGCGTCGGTACAGGA
TAAGCCGACGAATGATTTGACCGCTACACATGTTCACTGCTTTGTTTGTG
TTGTGGCGCACCAGATGCTCTCAAGCGGCATGATCGAGAGACACGAGCTG
TACGATCCCGACCTCCTCCTCGACTACCTCTTGCGGGTAAATGAGATGCT
GTCGCAGCGGGAGGCGAGCATGTGGGAGCTCATGATCGGACACAAGGATG
CCGTCTACGTGAGAAGAGAAACTATCGCATAGCTTTGCAGAAATCAATTC
GTTCGGGTGGGCGTTCTGCTGCTGCCTTCCGCCCCCCGCACCCGTTCCCA
TCTATCAGCGCGTAAATCGCTCCCCTTGTCGGCATGCTCACTTGCTTTTG
TTTTTTTGTAGCGGTTTCTACCGGCAAACTCTGTTGGAGATGTCACCGCC
CAGATTAGTGGAGTCTAGGCCGCAGCCGTTCATTCGCCCCATGATTTCGA
ATATCCACAGCTTTCAAGAATACCGTTGTTGACAAAATACTTGCGTATGC
GTCCCGCACGGCAAAAGAATAGTACGCACTCTTGATCGCTAGTATACGTG
GTTGTCAGATCCCTTGGACCGACTTTCTAAGCTCAAGAGCTCCGCGGCAG
CATGATGAGTGCCAGGCCCAAAACGGGCGGCTTTGGAAAGATCTCGTCGA
GAGCTGAACTTCACGAAAGAAATACATCTCGTTTTGCGTTGTGCCCGGCT
GAAAGTGCGGCAATCGAGCCTTGAATCAATTCAGGGGGTCTGATGTACGA
CGTCAAATACGGTTTTTGTGTGAGAAACGAAGTCTCACGGATGGTGATCC
GTGCTGATGGAGCTCGACACCTGCACATGCAGTGTAGCGGCAGCGCATGG
CCTCTTAGCAGTACTTCTCCGTGTCTTGAGATGTTTTTTCTTTTTTTGTC
TTGTGCTGCTGGTCCACTCTCTGGCCGTAGAGCAACAAACGGTCGCTGGC
GACGGCGCTCAAGAAGGCGAAGCGGCACAACTTCTGGTTGGGGATGGAGC
TGTCTTGGATGCTCGTCTGAGGAGAGGAGAGCCGTGATCGTGGATGCAGG
CATGAGCAACGGTCGCGGATGCTGGATAGCTCGCTGGATGTTCGCTTGAG
GAAAGCTGCTGCCGCTGCTGCAGCCGCGAACATTTGCGTAAGTGCCTGAG
AAAAACGGCTGGGATGGTTAGCTTGACCGGGATGGATAACTTGACAGGCA
TGGTACGCTTGGGTTCGTATGGTAAGGTTATGATATTCGTGTCGTGTCGG
TCGACGAGGGCGTACGCACGCCCACTCCCGTTCCTGGGCGCCCTCTTGCA
GGGGCGCACCTCATGATGCACTGCTGCCGGCGCACGAAATGCGGCGTATT
TGATGCGACACGATTGTTGCGACCCGACCGACGCGGCATGATTGATGGCG
GGGCTGATAAAAGTGTGTGTGTCCAGGATAACAGCTTTGGCTATCCTTGC
TTCGAAGCTGCTCCCCGTGGAGCGGATGATGGAAAATATGTGGCAAACGC
TTGCACGAAACCTTTTTTTTATGGACCAAGAGGCTAAGCGGATCAAATTT
CGAAACACGCACATGGGTCCGAAACATCGGCGTCAGGAGGGGGGCGGGGG
AGTCAGGTATCCAGAATTTTGATCAACACAGAACCTTGAGCCACCCTTTG
CTGCTCCATTTGGTGACGGTCTGATTTCGATTGTGACGAAACAAACACCG
TCTGGTTTCGTTGGTGACAAAATCAACACCATGGGATTGCCCTGTGTCCA
CAGAGTCGCTTCCAATCCTGGCTCGTTTCCTCTGTTTGCGACGAGGGCGT
TTCGTGTGCGCCTCAATGCCCACCATTTTCTTTTTGTTTAGGGTCTGCCG
GTACGTCTTCCCAATAACGTACCTGCCATATCGTCTCCATAGAGACGCCC
GTCGTGCGGGATCGGAGCTTTTTCCTTTGTGGGAAAATCGAGCTTTGAGA
GTCGATCCAGAGTTGTATTGCTCTTGTTTAAGAGTCTCATGGATATCTCT
CCGGAATATGACTTCCGACTAACGGGTACCGGTTGCCAGATGCCGAGCGC
CTTCCGCATGCGTTCGAATTTGCCTGAAATTGGTGCATTGGTCGTTGAAT
CAACTTCTTCGAGAGTAGCGTTGTGTCCCCAATTGCGTGGTGGGATTTAC
TGACGTTGTCTGGAAATGCGGTGCAGCTGTAAGCTCCACCTTGAGTGGTT
CATTTCACCGGCGTTTCTTGTGGAAATGATTTGCGTTGAAGGTTGTCCTT
GAATGGTCGATACCATCGGCGTTTCGTGCGAAAATAGGATGCATTGGGGC
CGTCCTTAAGTGGTCGAATTCCATCGGCGTTTCTCGCGGAAATGGGATGC
TTTGGTGCCGTGAGTTGTGGTTTTTACTGGCGTCTCGCGCGGAAGGTGGG
TTGCTTTGAACCCCTCCTTGTGAAGTGGAATGGACAGGCGTTTCGCGTCG
CATTGCGTTGTGT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig1:809451..818463-

>mRNA_P-fluviatile_contig1.50.1 ID=mRNA_P-fluviatile_contig1.50.1|Name=mRNA_P-fluviatile_contig1.50.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4806bp|location=Sequence derived from alignment at P-fluviatile_contig1:809451..818463- (Porterinema fluviatile SAG_2381)
ATGTTTTCCTCTGGCATAATGCAATGGGGTCGATACTCCCTTTCCAGCCA
TCCGACCTCAAGTCGTCGCAACGGGGCAGGCCTAAGTCAACTCGCGACCG
CAGTTCATAGATATATAGGCGATGAGACAGCAGACATATCCGTCTGCTGT
GTCGCGAGCGCGTCGTCGGCGGGAGTATGTAGGCGGCCGGGGACTCCGTT
CGGGGCAGCAGCGACAGTAACGTTGCATGATAATATCTCTTCTTCGACTG
GAGAAGGGTATGGGCTCCGGCTGCAGCCGGAGCAGGGCATGGCGCCCCCC
GTCGAGCGCTGGGAGCTGCTGCTGTCGCAGTCGGCGCGACCACCACCGAG
GACATCGGGGTTTGGTGGAATGGTGCGCGTGCTGGGACTGGAGGTGGGTC
GCGGACAGCGGCCTATTCTGTCTCCAGCCGCTTCCCGCGCTGCCTCTGCT
TCTGCTGTTGAATCACGCCCCGCCGGGGTGGCTGCCACCGGTGCTCGACT
GGGCAAACGGTGGCTGTCCACCGGGCCCATCTATCCTGGGGACGAGGACA
CCGGCGGCGACGACAGCGACACCGACTGCAGTGAGTTCGAGAGCACGCTC
TTCGCGAGAGTGGACGCTCCGGCCAAGGGGGAGGTCTCGAAGGCCGGAAA
AGTCCATAAGACACGCGCCGCTGGCACCAACGAAAGCGACCGGTCCTCGG
CCGCCGCCGACGCGCCGGAAACATCGGTGCACGCGGCGGCGGTGGCAGAA
GGGAGATCGGCGGCCAAAAACCCCAAGACCAGACGATCTCGCAACAGGCG
CGCCAGAAAAAGCGAGGGCAAGGCGCCCTCCTCGAAAGTGTCTGACCGGG
CTGCTGAGCCAGCAGCCACTCGTACAGCAGGCACAGCGCCAGCAGCGGCG
GCGGTGGCAGGAGAAGGAGGTGCGGTAGTGTTGGGAGCGGCGGCCCGGAA
GAAACCCAGGAGACCCCGCAACAGATGCGCCTCCAACAGCGAGGGTACGG
CGCCCTCTCCGCCCGCCGCTTCTGGGTCGGCTGCTGAGCCGGCATTTGAA
GAAAGAGAAACGCCGGCGGCCGTGGCGGCGGCAGGAGGAGGGGTTGCGGC
GGCCAACAGCAAACCCCCGAAGGCTAGAAAATCTCGGAAGAGATGGCCCA
TGACGAAGAGCAAAACCACAACTACCATTAAGCCCTCTCTGGCCGCCGAG
CTAGCAGTCCTGGCGGAAGAAACTGCAGCAGCACAAGGGACACCGACGGC
GGCCGGAGGGGAGAGAGGAGTAGGAGCAGGAGGGGAAGCGCAGTCGGGCG
TCAAAATTCCCGAGAGCAGGAGAACCGCCTTCCAGCGCGCGCGACGCGCT
GGCGTCGCCCGAAGAGCGGAAGAAGGGGGTGGTGGGGCGCTGGATAAAGG
GCAGGGAAGCGGTGGCGATGATGACAGCGAAGATGGCCACAAACGGGGGC
CTACCACCTGGCAGGCACCAGCGAAGATCGTGAATCCCTTGGGGTTCGTG
GCGGCGGAAGGCTCGCCCGAGGCTATGTTTTCCTCTGGCATAATGCAATG
GGGTCGATACTCCCTTTCCAGCCATCCGACCTCAAGTCGTCGCAACGGGG
CAGGCCTAAGTCAACTCGCGACCGCAGTTCATAGATATATAGGCGATGAG
ACAGCAGACATATCCGTCTGCTGTGTCGCGAGCGCGTCGTCGGCGGGAGT
ATGTAGGCGGCCGGGGACTCCGTTCGGGGCAGCAGCGACAGTAACGTTGC
ATGATAATATCTCTTCTTCGACTGGAGAAGGGTATGGGCTCCGGCTGCAG
CCGGAGCAGGGCATGGCGCCCCCCGTCGAGCGCTGGGAGCTGCTGCTGTC
GCAGTCGGCGCGACCACCACCGAGGACATCGGGGTTTGGTGGAATGGTGC
GCGTGCTGGGACTGGAGGTGGGTCGCGGACAGCGGCCTATTCTGTCTCCA
GCCGCTTCCCGCGCTGCCTCTGCTTCTGCTGTTGAATCACGCCCCGCCGG
GGTGGCTGCCACCGGTGCTCGACTGGGCAAACGGTGGCTGTCCACCGGGC
CCATCTATCCTGGGGACGAGGACACCGGCGGCGACGACAGCGACACCGAC
TGCAGTGAGTTCGAGAGCACGCTCTTCGCGAGAGTGGACGCTCCGGCCAA
GGGGGAGGTCTCGAAGGCCGGAAAAGTCCATAAGACACGCGCCGCTGGCA
CCAACGAAAGCGACCGGTCCTCGGCCGCCGCCGACGCGCCGGAAACATCG
GTGCACGCGGCGGCGGTGGCAGAAGGGAGATCGGCGGCCAAAAACCCCAA
GACCAGACGATCTCGCAACAGGCGCGCCAGAAAAAGCGAGGGCAAGGCGC
CCTCCTCGAAAGTGTCTGACCGGGCTGCTGAGCCAGCAGCCACTCGTACA
GCAGGCACAGCGCCAGCAGCGGCGGCGGTGGCAGGAGAAGGAGGTGCGGT
AGTGTTGGGAGCGGCGGCCCGGAAGAAACCCAGGAGACCCCGCAACAGAT
GCGCCTCCAACAGCGAGGGTACGGCGCCCTCTCCGCCCGCCGCTTCTGGG
TCGGCTGCTGAGCCGGCATTTGAAGAAAGAGAAACGCCGGCGGCCGTGGC
GGCGGCAGGAGGAGGGGTTGCGGCGGCCAACAGCAAACCCCCGAAGGCTA
GAAAATCTCGGAAGAGATGGCCCATGACGAAGAGCAAAACCACAACTACC
ATTAAGCCCTCTCTGGCCGCCGAGCTAGCAGTCCTGGCGGAAGAAACTGC
AGCAGCACAAGGGACACCGACGGCGGCCGGAGGGGAGAGAGGAGTAGGAG
CAGGAGGGGAAGCGCAGTCGGGCGTCAAAATTCCCGAGAGCAGGAGAACC
GCCTTCCAGCGCGCGCGACGCGCTGGCGTCGCCCGAAGAGCGGAAGAAGG
GGGTGGTGGGGCGCTGGATAAAGGGCAGGGAAGCGGTGGCGATGATGACA
GCGAAGATGGCCACAAACGGGGGCCTACCACCTGGCAGGCACCAGCGAAG
ATCGTGAATCCCTTGGGGTTCGTGGCGGCGGAAGGCTCGCCCGAGGCTGA
TAAGCAGCGGCGGCAGCGGCGGCGGCAGCACCCGGTGCTCGGGCATTTCG
TAGCAGACCTGGGTTACAAGCGCGTGTACGTGACGTCCGTGGAGGCCCTC
CTGAAGGCGCCGGTGTGGCAGAAGGCGCGGACGCTCCGCCACGTGCACGC
GGTCGAAATATTCCGGGCAAAGAAGCTCGAGGCCGAGAAGCTCGAGATCC
GCAAGATCGTGTCCGGCGAGGTCGAGGCTAAGGGGGAGCTGGAGATCGAG
ACGGATAAGCAGCGGCGGCAGCGGCGGCGGCAGCACCCGGTGCTCGGGCA
TTTCGTAGCAGACCTGGGTTACAAGCGCGTGTACGTGACGTCCGTGGAGG
CCCTCCTGAAGGCGCCGGTGTGGCAGAAGGCGCGGACGCTCCGCCACGTG
CACGCGGTCGAAATATTCCGGGCAAAGAAGCTCGAGGCCGAGAAGCTCGA
GATCCGCAAGATCGTGTCCGGCGAGGTCGAGGCTAAGGGGGAGCTGGAGA
TCGAGACGGTGAAGGGCATGCCTGGGGTGATCACGCTCTTCCAGCGGCCG
CTGCTGCCGGTGAAGGGCATGCCTGGGGTGATCACGCTCTTCCAGCGGCC
GCTGCTGCCGCTCAGAAAAAAGAACCAAAAGTACATTCTGGGTATCGTTG
ACGGGCAGCACCGCGTAGGTGCTCTGTCTTTGCTGGCGGAGGAGGGCCTG
TGGGATAAGTCCGCGCAGAACGTTGTCGTGGAGGTGTTCGACACCAAGGA
CGAAAAGGCCGTCGAGGAGCTCTTCGTCGAGATCAACAGCTCAGAAAAAA
GAACCAAAAGTACATTCTGGGTATCGTTGACGGGCAGCACCGCGTAGGTG
CTCTGTCTTTGCTGGCGGAGGAGGGCCTGTGGGATAAGTCCGCGCAGAAC
GTTGTCGTGGAGGTGTTCGACACCAAGGACGAAAAGGCCGTCGAGGAGCT
CTTCGTCGAGATCAACAGGGCGGAGCCGAGCGTGGTTGACTTCGCTCAGC
CGGGCCCGGAGGAGATCAAGAAGTGCGCGGACAAAGTGGTCCTCCACCTG
TATTACGGCGGAGCCGAGCGTGGTTGACTTCGCTCAGCCGGGCCCGGAGG
AGATCAAGAAGTGCGCGGACAAAGTGGTCCTCCACCTGTATTACGAATAT
CGGCCAATGTTCGGCGGCGAGCGTGTTCGCCCACCGAGCCTCAACGCTAC
CATCTTCAAGGAGAACGAATATCGGCCAATGTTCGGCGGCGAGCGTGTTC
GCCCACCGAGCCTCAACGCTACCATCTTCAAGGAGAACATGCTCTCAAGC
GGCATGATCGAGAGACACGAGCTGTACGATCCCGACCTCCTCCTCGACTA
CCTCTTGCGGGTAAATGAGATGCTGTCGCAGCGGGAGGCGAGCATGTGGG
AGCTCATGATCGGACACAAGGATGCCGTCTACATGCTCTCAAGCGGCATG
ATCGAGAGACACGAGCTGTACGATCCCGACCTCCTCCTCGACTACCTCTT
GCGGGTAAATGAGATGCTGTCGCAGCGGGAGGCGAGCATGTGGGAGCTCA
TGATCGGACACAAGGATGCCGTCTACAGCAACAAACGGTCGCTGGCGACG
GCGCTCAAGAAGGCGAAGCGGCACAACTTCTGGTTGGGGATGGAGCTGTC
TTGGATGCTCGTCTGAAGCAACAAACGGTCGCTGGCGACGGCGCTCAAGA
AGGCGAAGCGGCACAACTTCTGGTTGGGGATGGAGCTGTCTTGGATGCTC
GTCTGA
back to top