mRNA_P-fluviatile_contig12.1512.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE) HSP 1 Score: 266 bits (679), Expect = 2.280e-76 Identity = 126/160 (78.75%), Postives = 144/160 (90.00%), Query Frame = 2
Query: 302 YVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVS 781
+VG++ DTE F K TRENLQ A+E+ARQNL+ERA KQAA N++LPQFPVF+PGQ+VLLYKPY DSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETRE+SVHLAHLKQYHAR PPAPQFD+LAEYFLGK+IPL A + T DQPRIERY+V+K+ +
Sbjct: 734 HVGSSADTEVFTKTTRENLQTAYELARQNLSERAAKQAAHNDKLPQFPVFQPGQQVLLYKPYHDSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETRELSVHLAHLKQYHARQAPPAPQFDRLAEYFLGKRIPLPATEN-TVDQPRIERYIVEKVAA 892
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.600e-51 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHV 303
GTEFENK+IHQLQTILGY+KT TTPYRPQGNSVSERVHSTMH+ML+MH+SM RDNWAELLPMVQLAYNTSF+ TM ETPYFLMFGRQARLPVDVILGIPHV
Sbjct: 530 GTEFENKVIHQLQTILGYKKTCTTPYRPQGNSVSERVHSTMHSMLAMHSSMGRDNWAELLPMVQLAYNTSFSATMHETPYFLMFGRQARLPVDVILGIPHV 630
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.810e-44 Identity = 94/209 (44.98%), Postives = 133/209 (63.64%), Query Frame = 2
Query: 305 VGTTPDTET---FAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVSHKSGRGRKGPHNYTYRLRLRGYGPESDLIYRADEIPQCREMISAYRS 922
V +TP ++ +++ T ENLQ+A+E+AR+NL ER++KQA NE+L FP FK G +VL+++PY +S GPNPKL+ PW GPYT+ +QLSPV+YRV +PNE E +VHL +K Y A + P P + L E FLG +PL +D T + Y ++ I HK G G N+ Y L+L+ Y + L IPQC EMI++YR+
Sbjct: 958 VPSTPAPQSRLDYSRRTVENLQLAYELARRNLKERSSKQADANEKL-SFPSFKFGDQVLVHRPYTESAGPNPKLISPWHGPYTVRAQLSPVIYRVSKPNEPTETTVHLGRMKPYIAPTSSPVPDPETLDELFLGTTLPLPDLDGSTT-AVTLGPYTIEFIDGHKRGVGAASLDNFQYHLKLKDYSSQLGLWRHYRAIPQCAEMIASYRA 1164
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE) HSP 1 Score: 144 bits (362), Expect = 4.260e-33 Identity = 72/150 (48.00%), Postives = 102/150 (68.00%), Query Frame = 2
Query: 335 AKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVSH 784
++ T ENLQ+A+E+AR+NL ER KQA NE+L FP FK G +VLL++PY ++DGPNPKL+ PW GP+T+ SQ+SPV+YRV +PN+ EV+VHL +K + + P P F+ L + FLG +P+ +D I+ YVV+ I H
Sbjct: 780 SRRTVENLQLAYELARRNLKERTDKQAVENEKL-SFPSFKMGDQVLLHRPYNETDGPNPKLVSPWHGPFTVRSQISPVIYRVSKPNDPTEVTVHLGRMKPFVQPTSSPDPDFEALDDMFLGTALPVPDLDGFMHTVT-IDPYVVEAIDGH 927
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A5S6Q473_TRIMR (Integrase catalytic domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q473_TRIMR) HSP 1 Score: 102 bits (255), Expect = 3.990e-20 Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIP 297
G FE ++ +L + G QKTRTTPY PQ N + ERV+ T+ +L S + W +LPMV +AYNTS +++ TPYF +FGR+ARLPVD+ G+P
Sbjct: 212 GRTFEASLMKELWQVFGIQKTRTTPYHPQSNGLVERVNRTLLDVLQALASEAFETWDRILPMVTMAYNTSVHESTGTTPYFAIFGREARLPVDIYCGVP 310
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A8C1S7G3_CYPCA (Integrase catalytic domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1S7G3_CYPCA) HSP 1 Score: 103 bits (258), Expect = 5.600e-20 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILG 291
G FE+++IHQL + G K+RTTPY P GN ER + T+H +L S + +WA LP V YNT+ ++T E+P+FLMFG++ARLPVD +LG
Sbjct: 339 GRNFESRLIHQLCALYGIVKSRTTPYHPAGNGQCERFNRTLHNLLRTLPSARKRDWAACLPQVVFCYNTTLHQTTGESPHFLMFGQEARLPVDFLLG 435
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A0V0RSY0_9BILA (Retrovirus-related Pol polyprotein from transposon n=1 Tax=Trichinella nelsoni TaxID=6336 RepID=A0A0V0RSY0_9BILA) HSP 1 Score: 100 bits (250), Expect = 7.510e-20 Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHV 303
G FE +I +L KTRTTPY PQ + + ER H T+ MLS + R NW +LPM LAY TS N++ + TPY +MFGR+A LP+DV+ G+P +
Sbjct: 29 GRNFEAALIKELCETFDIHKTRTTPYHPQSSGLVERFHRTLLTMLSARATTYRRNWDLVLPMTLLAYRTSINESTKATPYRIMFGREAALPIDVMYGLPEI 129
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A8C1DE55_CYPCA (Ribonuclease H n=4 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DE55_CYPCA) HSP 1 Score: 103 bits (258), Expect = 8.830e-20 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILG 291
G FE+++IHQL + G K+RTTPY P GN ER + T+H +L S + +WA LP V YNT+ ++T E+P+FLMFG++ARLPVD +LG
Sbjct: 989 GRNFESRLIHQLCALYGIVKSRTTPYHPAGNGQCERFNRTLHNLLRTLPSARKRDWAACLPQVVFCYNTTLHQTTGESPHFLMFGQEARLPVDFLLG 1085
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A5S6Q6P2_TRIMR (RNA-directed DNA polymerase n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q6P2_TRIMR) HSP 1 Score: 103 bits (258), Expect = 8.990e-20 Identity = 56/130 (43.08%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVRRNYTRYRNVRQEHSRKSADCF*NSKTKL 390
G +FE+K+I L T LG +KTRTTPYRPQ + + ER++ ++ A+L+ + + W LP V LAY TS + + ETP+FLMFG+Q R+PVD+++G P + R T++ VR E +++ F + +TKL
Sbjct: 1128 GRQFESKLITDLCTKLGIRKTRTTPYRPQSDGLVERMNRSLTALLTAYAYDNPTTWTSWLPKVMLAYRTSVHVSTGETPFFLMFGQQCRMPVDLMVGEPVLPRQ-TQHEYVR-EMAKEMERAFTSVRTKL 1255
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Match: A0A5S6Q432_TRIMR (Uncharacterized protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q432_TRIMR) HSP 1 Score: 103 bits (258), Expect = 9.110e-20 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIP 297
G FE ++ +L + G QKTRTTPY PQ N + ERV+ T+ +L S + W +LPMV +AYNTS ++ TPYF MFGR+ARLPVD+ G+P
Sbjct: 1182 GRTFEASLMKELWQVFGIQKTRTTPYHPQSNGLVERVNRTLLDVLQALASEAFETWDRILPMVTMAYNTSVHEATGTTPYFAMFGREARLPVDIYCGVP 1280 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1512.1 >prot_P-fluviatile_contig12.1512.1 ID=prot_P-fluviatile_contig12.1512.1|Name=mRNA_P-fluviatile_contig12.1512.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=312bp MSFWAFRTYVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEback to top mRNA from alignment at P-fluviatile_contig12:2496509..2497938+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1512.1 ID=mRNA_P-fluviatile_contig12.1512.1|Name=mRNA_P-fluviatile_contig12.1512.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1430bp|location=Sequence derived from alignment at P-fluviatile_contig12:2496509..2497938+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2496509..2497938+ >mRNA_P-fluviatile_contig12.1512.1 ID=mRNA_P-fluviatile_contig12.1512.1|Name=mRNA_P-fluviatile_contig12.1512.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1872bp|location=Sequence derived from alignment at P-fluviatile_contig12:2496509..2497938+ (Porterinema fluviatile SAG_2381)back to top |