prot_P-fluviatile_contig9.15250.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig9.15250.1
Unique Name	prot_P-fluviatile_contig9.15250.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	165

Homology

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BLAST of mRNA_P-fluviatile_contig9.15250.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.740e-27
Identity = 74/127 (58.27%), Postives = 80/127 (62.99%), Query Frame = 0

Query:   33 SPKGSLAAFVTCSISTLLLISSCCQPFRDESRCHRAFDDGSGAGGETSSSSIFGAFCACT--GRSCSSSGGGHQRIPSLWAWFALLGGVSGAVGELVPLGVDDNLSMPIVSGGMFLALARC-TVGGP 156
            S  GSLAAF+ CS+STLLL   CC+P  DE R      D      +  SS IFG F ACT  GR    SGG       L  WFALLGGVSGAVGEL+PLGVDDNLSMPIVSG  FLAL +C T  GP
Sbjct:  168 SLAGSLAAFLACSLSTLLLFGCCCRPPGDEGRDSDHVGDS-----DLLSSLIFGHFSACTAVGRGGRDSGGSGTP---LLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLALRKCSTFDGP 286

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig9.15250.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig9.15250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8G9_ECTSI	1.740e-27	58.27	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..108
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 14..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 135..153
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 109..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..134
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..37
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 154..164
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..59
None	No IPR available	TMHMM	TMhelix		coord: 109..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig9	contig	P-fluviatile_contig9:2259840..2260334 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig9.15250.1	mRNA_P-fluviatile_contig9.15250.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig9 2259461..2260875 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig9.15250.1 ID=prot_P-fluviatile_contig9.15250.1|Name=mRNA_P-fluviatile_contig9.15250.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=165bp
MTSAHYRRFSPKYLTVCTVLMFPSSTVADSLTSPKGSLAAFVTCSISTLL
LISSCCQPFRDESRCHRAFDDGSGAGGETSSSSIFGAFCACTGRSCSSSG
GGHQRIPSLWAWFALLGGVSGAVGELVPLGVDDNLSMPIVSGGMFLALAR
CTVGGPSSWPWSWS*