prot_P-fluviatile_contig9.15244.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15244.1
Unique Nameprot_P-fluviatile_contig9.15244.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1016
Homology
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: A0A6H5JG03_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 5.810e-110
Identity = 233/419 (55.61%), Postives = 270/419 (64.44%), Query Frame = 0
Query:  349 PFQLDNLEALLLGPCAASXXXXXXXXAFNAGFSSAALNATGLGLWGWCFPTLKPMVGEGSATGAGEAQAQAPNPGAAAGGTIMAGVPGYGGXXXXXXXXXXXXXXXXXGGGEGYSGAIMPPGRYLDSRNMNAPTASG--GGAADCSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEREGSGQSEGDREGYSTSSSNTSELKRQERNAREQRRALMTSQQIDKLRQLLQECGICTKANKSSVLSEVARYTAELQRQVQQLEEDRARWIAETADVPAVERQDPYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAG-IQEHVVSKAVLKNKDQDLSLTLSLVRDALGRPKFFLCSLLPTNPEAMPPSSQVP 764
            PF    L AL+    AAS          N     AA++ATGLGLWGWCFP+  P++G G   G     A A   GA AGGTI+AGVPG G                   G + Y   +    ++L+  ++  P  +G  GG +  +N                                    ++EGS  S            N SELKRQERNAREQRR+LMTS+QIDKLR+LLQECGI TKANKSSVLSEVA YTA+LQ+Q++QLEE+RARW+AET+DVP V RQDP GG IDCKQVFAHAS+ALAMATVEG+LIESNLQFEALSGH  +ELKQLTLLSLTAPS+LQETFQRLSAMLTDG G   EHV+SKAVLKNKDQDLSL+L+LVRDALGRPK+FLCSLLP  P A PP S VP
Sbjct:    2 PFPSHQLGALM----AASGGDSGGSGTNNGYPDVAAMDATGLGLWGWCFPSPTPIMGAG-VEGRAPISAGA-GXGARAGGTILAGVPGLGSVGNFQALATSPAATLAAAGPQQYPRPMPRGQQFLEPGDVRPPNVAGAWGGVSRINNAGGGVSSSEGEVAGLGVGELGAAAHSGGTE------QQEGSVGSGXXXXXXXXXXXNPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFQRLSAMLTDGTGKAPEHVLSKAVLKNKDQDLSLSLTLVRDALGRPKYFLCSLLPNTPAASPPLSTVP 408          
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: D7G8G2_ECTSI (BHLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G2_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.870e-71
Identity = 187/354 (52.82%), Postives = 217/354 (61.30%), Query Frame = 0
Query:  348 PPFQLDNLEALLLGPCAASXXXXXXXXAFNAGFSS-AALNATGLGLWGWCFPTLKPMVGEGSATGAGEAQAQAPNPGAAAGGTIMAGVPGYGGXXXXXXXXXXXXXXXXXGGGEGYSGAIMPPGRYLDSRNMNAPTASG--GGAADCSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEREGSGQSEGDREGYSTSSSNTSELKRQERNAREQRRALMTSQQIDKLRQLLQECGICTKANKSSVLSEVARYTAELQRQVQQLEEDRARWIAETADVPAVERQDPYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETF 698
            P  QL  L A   G C  S          N G+   AAL+ATGLGLWGWCFP+  P++G G                  AGGTI+AGVPG G              XXXX G + Y   +    ++L+  ++  P A+G  GG +  +N                         XXXXXXXXXX                       SELKRQERNAREQRR+LMTS+QIDKLR+LLQECGI TKANKSSVLSEVA YTA+LQ+Q++QLEE+RARW+AET+DVP V RQDP GG IDCKQVFAHAS+ALAMATVEG+LIESNLQFEALSGH  +ELKQLTLLSLTAPS+LQETF
Sbjct:    4 PSHQLGALMAASGGDCGNSGT--------NNGYRDVAALDATGLGLWGWCFPSPTPIMGAG--VEGXXXXXXXXXXXXRAGGTILAGVPGLGSVGNFQALAATPAAXXXXXGPQQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 346          
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: A0A4D9CZ03_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ03_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.970e-14
Identity = 72/242 (29.75%), Postives = 118/242 (48.76%), Query Frame = 0
Query:  555 KRQERNAREQRRALMTSQQIDKLRQLLQECGICTKAN-KSSVLSEVARYTAELQRQV-----------------------------QQLEEDRARWIAETADVPAVE-RQD-PYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAGIQEHVVSKAVLK---------------NKDQDLSLTLSLVRDALGRPKFFLCSL 749
            ++Q+RNAREQ+R+L  SQQI  L+ LL+E G   K N K ++L  V  Y  EL+ +V                             + + +   R  ++ + V A   R+D      +    +F   S  LA+A+VEG+ I++N++FE  +G+ + EL++LT  +L AP +LQ+TF  ++ ML   +G +E      +L+                + Q+L +T+SLV+       FF CSL
Sbjct:   28 RKQDRNAREQKRSLKISQQIGHLKSLLEEEGRKVKKNSKMAILLSVEDYIKELEEEVGGMVLGREGGXXXXXXXXXXMDVGVGTSVEAVGQRNGRSESDLSVVTATSVREDREVARGVGYHSLFKQVSTPLAVASVEGRFIDANVRFEMATGYTKAELERLTFFNLVAPEELQDTFAAVARMLNQPSGEEEDKEDSEMLRLTRRALPKVGIGGLGQQAQNLHITISLVKPQEDSMAFFQCSL 269          
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: W7TXM2_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXM2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-8
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 0
Query:  641 DCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAGIQEHVVSKAVLKNKDQDLSLTLSLVRDALGRPKFFLCSLLP 751
            D   +F +AS+A+A+A+++G+ ++ N  F  +SG++  E+ Q ++  LT   D QE    +  M+   A   +H   +   +N+D    +++ LVR A G P FF C++LP
Sbjct:  304 DYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLP 414          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JG03_9PHAE5.810e-11055.61BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G8G2_ECTSI1.870e-7152.82BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9CZ03_9STRA2.970e-1429.75Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W7TXM2_9STRA1.300e-831.53Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 861..881
NoneNo IPR availableCOILSCoilCoilcoord: 596..623
NoneNo IPR availableCOILSCoilCoilcoord: 269..289
NoneNo IPR availableGENE3D3.30.450.20coord: 642..750
e-value: 6.2E-7
score: 31.3
NoneNo IPR availablePANTHERPTHR45888FAMILY NOT NAMEDcoord: 180..886
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 560..612
e-value: 8.9E-7
score: 38.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 555..607
e-value: 4.4E-5
score: 23.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 554..606
score: 10.779
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 644..747
e-value: 3.7E-6
score: 25.1
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 545..629
e-value: 9.7E-10
score: 40.2
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 546..619
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 648..747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:2190522..2198877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15244.1mRNA_P-fluviatile_contig9.15244.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 2190094..2199436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15244.1 ID=prot_P-fluviatile_contig9.15244.1|Name=mRNA_P-fluviatile_contig9.15244.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1016bp
MKNISICLVREQTPKEKPTSGADKERDQCQSRVMRFLLRLASALPIHRLR
PAAIAANAPGAGSFTMSTDPLDAVGQGHTWYGYNLSLSDEAEACAGKSDG
GGGDGGGGSRHGGGRKSPRRTQGLMADRLYSGLPGPSGAVFPDSSSDKAA
ARSTKKEAGERHVKKEPFLWSDDVGELHRRQQQHQQPQQQYPSSRHQRQP
QSGWSGGAQPFSTFLPQYPIPPAGGVRGLDLSWPLPAAPLSNLLFPSSME
PLPAQQQQQQAFQHHQQVVRQQQQRQQQQQQQQAILQQQQQQQHQAFQEQ
QAFQQHQLWQQQHAMQKQALMQRQQQQQQHQHHHQHRPSAATASTGDPPF
QLDNLEALLLGPCAASGGGGGGGGAFNAGFSSAALNATGLGLWGWCFPTL
KPMVGEGSATGAGEAQAQAPNPGAAAGGTIMAGVPGYGGIGNFQAVAAAP
GAAIGGGGGEGYSGAIMPPGRYLDSRNMNAPTASGGGAADCSNGNGGASA
LGQEGGGGRGGRSGGGGGGCSGGVGGGGFEREGSGQSEGDREGYSTSSSN
TSELKRQERNAREQRRALMTSQQIDKLRQLLQECGICTKANKSSVLSEVA
RYTAELQRQVQQLEEDRARWIAETADVPAVERQDPYGGAIDCKQVFAHAS
LALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQR
LSAMLTDGAGIQEHVVSKAVLKNKDQDLSLTLSLVRDALGRPKFFLCSLL
PTNPEAMPPSSQVPDHPPRPPPPPAFSVRRPSEDAPGPAPSLGTGLYAPS
AAAATAAAVTTAAAAAPAAAGSARGPSRLPPATKSVVTTMSREYREDVGG
VIDDAGGAVTRQQQQQQQKQQEQSRNDLTAADSDGGLRRAIEGTAAVPPL
AAAAAAAVAVASSDPTNLQDSSHEAAVSGSPSPLSAADAAASDDIGPPVP
AGSGMTGCGSDSDVGSTVMSSSEVVELVGLFDDHRGCGGDGCGGGGGGGG
GGGGGGDTSSDVNGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR000014PAS
IPR036638HLH_DNA-bd_sf
IPR035965PAS-like_dom_sf