mRNA_P-fluviatile_contig9.15244.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: A0A6H5JG03_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE) HSP 1 Score: 363 bits (933), Expect = 1.160e-107 Identity = 233/419 (55.61%), Postives = 270/419 (64.44%), Query Frame = 3
Query: 1473 PFQLDNLEALLLGPCAASXXXXXXXXAFNAGFSSAALNATGLGLWGWCFPTLKPMVGEGSATGAGEAQAQAPNPGAAAGGTIMAGVPGYGGXXXXXXXXXXXXXXXXXGGGEGYSGAIMPPGRYLDSRNMNAPTASG--GGAADCSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEREGSGQSEGDREGYSTSSSNTSELKRQERNAREQRRALMTSQQIDKLRQLLQECGICTKANKSSVLSEVARYTAELQRQVQQLEEDRARWIAETADVPAVERQDPYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAG-IQEHVVSKAVLKNKDQDLSLTLSLVRDALGRPKFFLCSLLPTNPEAMPPSSQVP 2720
PF L AL+ AAS N AA++ATGLGLWGWCFP+ P++G G G A A GA AGGTI+AGVPG G G + Y + ++L+ ++ P +G GG + +N ++EGS S N SELKRQERNAREQRR+LMTS+QIDKLR+LLQECGI TKANKSSVLSEVA YTA+LQ+Q++QLEE+RARW+AET+DVP V RQDP GG IDCKQVFAHAS+ALAMATVEG+LIESNLQFEALSGH +ELKQLTLLSLTAPS+LQETFQRLSAMLTDG G EHV+SKAVLKNKDQDLSL+L+LVRDALGRPK+FLCSLLP P A PP S VP
Sbjct: 2 PFPSHQLGALM----AASGGDSGGSGTNNGYPDVAAMDATGLGLWGWCFPSPTPIMGAG-VEGRAPISAGA-GXGARAGGTILAGVPGLGSVGNFQALATSPAATLAAAGPQQYPRPMPRGQQFLEPGDVRPPNVAGAWGGVSRINNAGGGVSSSEGEVAGLGVGELGAAAHSGGTE------QQEGSVGSGXXXXXXXXXXXNPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFQRLSAMLTDGTGKAPEHVLSKAVLKNKDQDLSLSLTLVRDALGRPKYFLCSLLPNTPAASPPLSTVP 408
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: D7G8G2_ECTSI (BHLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G2_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.220e-70 Identity = 187/354 (52.82%), Postives = 217/354 (61.30%), Query Frame = 3
Query: 1470 PPFQLDNLEALLLGPCAASXXXXXXXXAFNAGFSS-AALNATGLGLWGWCFPTLKPMVGEGSATGAGEAQAQAPNPGAAAGGTIMAGVPGYGGXXXXXXXXXXXXXXXXXGGGEGYSGAIMPPGRYLDSRNMNAPTASG--GGAADCSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEREGSGQSEGDREGYSTSSSNTSELKRQERNAREQRRALMTSQQIDKLRQLLQECGICTKANKSSVLSEVARYTAELQRQVQQLEEDRARWIAETADVPAVERQDPYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETF 2522
P QL L A G C S N G+ AAL+ATGLGLWGWCFP+ P++G G AGGTI+AGVPG G XXXX G + Y + ++L+ ++ P A+G GG + +N XXXXXXXXXX SELKRQERNAREQRR+LMTS+QIDKLR+LLQECGI TKANKSSVLSEVA YTA+LQ+Q++QLEE+RARW+AET+DVP V RQDP GG IDCKQVFAHAS+ALAMATVEG+LIESNLQFEALSGH +ELKQLTLLSLTAPS+LQETF
Sbjct: 4 PSHQLGALMAASGGDCGNSGT--------NNGYRDVAALDATGLGLWGWCFPSPTPIMGAG--VEGXXXXXXXXXXXXRAGGTILAGVPGLGSVGNFQALAATPAAXXXXXGPQQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 346
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: A0A4D9CZ03_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ03_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.150e-14 Identity = 72/242 (29.75%), Postives = 118/242 (48.76%), Query Frame = 3
Query: 2091 KRQERNAREQRRALMTSQQIDKLRQLLQECGICTKAN-KSSVLSEVARYTAELQRQV-----------------------------QQLEEDRARWIAETADVPAVE-RQD-PYGGAIDCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAGIQEHVVSKAVLK---------------NKDQDLSLTLSLVRDALGRPKFFLCSL 2675
++Q+RNAREQ+R+L SQQI L+ LL+E G K N K ++L V Y EL+ +V + + + R ++ + V A R+D + +F S LA+A+VEG+ I++N++FE +G+ + EL++LT +L AP +LQ+TF ++ ML +G +E +L+ + Q+L +T+SLV+ FF CSL
Sbjct: 28 RKQDRNAREQKRSLKISQQIGHLKSLLEEEGRKVKKNSKMAILLSVEDYIKELEEEVGGMVLGREGGXXXXXXXXXXMDVGVGTSVEAVGQRNGRSESDLSVVTATSVREDREVARGVGYHSLFKQVSTPLAVASVEGRFIDANVRFEMATGYTKAELERLTFFNLVAPEELQDTFAAVARMLNQPSGEEEDKEDSEMLRLTRRALPKVGIGGLGQQAQNLHITISLVKPQEDSMAFFQCSL 269
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Match: W7TXM2_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXM2_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.870e-8 Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 3
Query: 2349 DCKQVFAHASLALAMATVEGQLIESNLQFEALSGHARDELKQLTLLSLTAPSDLQETFQRLSAMLTDGAGIQEHVVSKAVLKNKDQDLSLTLSLVRDALGRPKFFLCSLLP 2681
D +F +AS+A+A+A+++G+ ++ N F +SG++ E+ Q ++ LT D QE + M+ A +H + +N+D +++ LVR A G P FF C++LP
Sbjct: 304 DYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVFFQCAVLP 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15244.1 >prot_P-fluviatile_contig9.15244.1 ID=prot_P-fluviatile_contig9.15244.1|Name=mRNA_P-fluviatile_contig9.15244.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1016bp MKNISICLVREQTPKEKPTSGADKERDQCQSRVMRFLLRLASALPIHRLRback to top mRNA from alignment at P-fluviatile_contig9:2190094..2199436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15244.1 ID=mRNA_P-fluviatile_contig9.15244.1|Name=mRNA_P-fluviatile_contig9.15244.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9343bp|location=Sequence derived from alignment at P-fluviatile_contig9:2190094..2199436+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:2190094..2199436+ >mRNA_P-fluviatile_contig9.15244.1 ID=mRNA_P-fluviatile_contig9.15244.1|Name=mRNA_P-fluviatile_contig9.15244.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6096bp|location=Sequence derived from alignment at P-fluviatile_contig9:2190094..2199436+ (Porterinema fluviatile SAG_2381)back to top |