mRNA_P-fluviatile_contig12.1468.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE) HSP 1 Score: 457 bits (1175), Expect = 3.290e-149 Identity = 220/260 (84.62%), Postives = 242/260 (93.08%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVS 781
GTEFENKIIHQLQ++LGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMH+SM+RDNWAELLPMVQLAYNTSFNKTM ETP+FLMFGRQARLPVDVILGIPHVG++ DTE F K TRENLQ A+E+ARQNL+ERA KQAA N++LPQFPVF+PGQ+VLLYKPY DSDGPNPKLLLPWRG PYTICSQLSPVVYRVKRPNETRE+SVHLAHLKQYHAR PPAPQFD+LAEYFLGK+IPL A + T DQPRIERY+V+K+ +
Sbjct: 635 GTEFENKIIHQLQSVLGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHSSMERDNWAELLPMVQLAYNTSFNKTMHETPFFLMFGRQARLPVDVILGIPHVGSSADTEVFTKTTRENLQTAYELARQNLSERAAKQAAHNDKLPQFPVFQPGQQVLLYKPYHDSDGPNPKLLLPWRG-PYTICSQLSPVVYRVKRPNETRELSVHLAHLKQYHARQAPPAPQFDRLAEYFLGKRIPLPATEN-TVDQPRIERYIVEKVAA 892
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.130e-90 Identity = 153/307 (49.84%), Postives = 212/307 (69.06%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVSHKSGRGRKGPHNYTYRLRLRGYGPESDLIYRADEIPQCREMISAYRS 922
G EFEN+++ +LQ++ GY+KTRT YRPQGNSV ERVHST+H M +M+ ++ DNW+ELLP VQLA+NT+++ T+QETP++LMFGR A+LPVD+ILG+P +++ T ENLQ+A+E+AR+NL ER++KQA NE+L FP FK G +VL+++PY +S GPNPKL+ PW G PYT+ +QLSPV+YRV +PNE E +VHL +K Y A + P P + L E FLG +PL +D T + Y ++ I HK G G N+ Y L+L+ Y + L IPQC EMI++YR+
Sbjct: 861 GKEFENRLVKELQSVFGYKKTRTAAYRPQGNSVLERVHSTVHNMFAMYRNLACDNWSELLPFVQLAHNTAYSTTLQETPHYLMFGRAAKLPVDLILGVPSTPAPQSRLDYSRRTVENLQLAYELARRNLKERSSKQADANEKL-SFPSFKFGDQVLVHRPYTESAGPNPKLISPWHG-PYTVRAQLSPVIYRVSKPNEPTETTVHLGRMKPYIAPTSSPVPDPETLDELFLGTTLPLPDLDGSTT-AVTLGPYTIEFIDGHKRGVGAASLDNFQYHLKLKDYSSQLGLWRHYRAIPQCAEMIASYRA 1164
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE) HSP 1 Score: 267 bits (683), Expect = 9.830e-77 Identity = 130/261 (49.81%), Postives = 186/261 (71.26%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRVKRPNETREVSVHLAHLKQYHARDTPPAPQFDKLAEYFLGKQIPLAAVDQPTDDQPRIERYVVQKIVSH 784
G EFEN+++ +LQT+ GY+KTRT YRPQGNSV ERVH+T+H ML+M++++ D W+ELLP VQLA+NT+++KT++ETP++L+FGR LPV++ LG+P ++ T ENLQ+A+E+AR+NL ER KQA NE+L FP FK G +VLL++PY ++DGPNPKL+ PW G P+T+ SQ+SPV+YRV +PN+ EV+VHL +K + + P P F+ L + FLG +P+ +D I+ YVV+ I H
Sbjct: 670 GREFENQLVKELQTVFGYKKTRTAAYRPQGNSVLERVHNTVHNMLAMYSNLACDIWSELLPFVQLAHNTAYSKTLEETPHYLVFGRAPTLPVELFLGVPATDAPQSRLDHSRRTVENLQLAYELARRNLKERTDKQAVENEKL-SFPSFKMGDQVLLHRPYNETDGPNPKLVSPWHG-PFTVRSQISPVIYRVSKPNDPTEVTVHLGRMKPFVQPTSSPDPDFEALDDMFLGTALPVPDLDGFMHTVT-IDPYVVEAIDGH 927
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE) HSP 1 Score: 237 bits (605), Expect = 2.190e-67 Identity = 114/132 (86.36%), Postives = 124/132 (93.94%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDTETFAKNTRENLQIAFEIARQNLTER 397
GTEFENK+IHQLQTILGY+KT TTPYRPQGNSVSERVHSTMH+ML+MH+SM RDNWAELLPMVQLAYNTSF+ TM ETPYFLMFGRQARLPVDVILGIPHVG T DTE A+NTR+NLQIAFE+AR+NLTER
Sbjct: 530 GTEFENKVIHQLQTILGYKKTCTTPYRPQGNSVSERVHSTMHSMLAMHSSMGRDNWAELLPMVQLAYNTSFSATMHETPYFLMFGRQARLPVDVILGIPHVGPTMDTEEIAQNTRDNLQIAFELARRNLTER 661
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A7D9LZS8_PARCT (Retrovirus-related Pol poly from transposon 412, partial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LZS8_PARCT) HSP 1 Score: 128 bits (322), Expect = 8.980e-30 Identity = 76/223 (34.08%), Postives = 119/223 (53.36%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIP-HVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRV-KRPNETREVSVHLAHLKQYHARDTPPAP 664
G FE+ + ++ ILG +KTRTTPY PQ + + ER++ T+ +LS + +D+W LP LAY ++ + +P+FL+FGR+ R+PVD++ P P T +A+ R+ + +E+ R N + + + + + + G+KV LY P+ G N KL PWRG PYTI ++S VVYR+ K N+ + VH LK R P
Sbjct: 9 GRNFESAVFKEIIDILGIKKTRTTPYHPQSDGLVERMNRTLKDILSKLVNERQDDWDRCLPQALLAYRSTVQTSTGFSPHFLVFGRETRIPVDLMTPEPPQAEVPPTTSEYAEKLRKRFERTYELTRVNTKKSSERYKDYYDAKAKDTTYNVGEKVWLYVPFVKK-GKNLKLSRPWRG-PYTIVKKISDVVYRIEKNANKRNRLVVHYNRLKPCFERPLKSLP 229
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A7D9EL83_PARCT (Retrovirus-related Pol poly from transposon n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EL83_PARCT) HSP 1 Score: 130 bits (326), Expect = 1.200e-28 Identity = 77/223 (34.53%), Postives = 119/223 (53.36%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIP-HVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRV-KRPNETREVSVHLAHLKQYHARDTPPAP 664
G FE+ + ++ ILG +KTRTTPY PQ + + ER++ T+ +LS + +D+W LP LAY ++ + +P+FLMFGR+ R+PVD++ P P T +A+ R+ + +E+ R N + + + + + + G+KV LY P+ G N KL PWRG PYTI ++S VVYR+ K N+ + VH LK R P
Sbjct: 314 GRNFESAVFKEIIDILGIKKTRTTPYHPQSDGLVERMNRTLKDILSKLVNERQDDWDRCLPQALLAYRSTVQTSTGFSPHFLMFGRETRIPVDLMTPEPPQAEVPPTTSEYAEKLRKRFERTYELTRVNTKKSSERYKDYYDAKAKDTTYNVGEKVWLYVPFVKK-GKNLKLSRPWRG-PYTIVKKISDVVYRIEKNANKRNRLVVHYNRLKPCFERPLKSLP 534
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A6S7GF22_PARCT (Transposon Ty3-G Gag-Pol poly (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GF22_PARCT) HSP 1 Score: 129 bits (324), Expect = 2.750e-28 Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIP-HVGTTPDTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRV-KRPNETREVSVHLAHLK 631
G FE+ + ++ ILG +KTRTTPY PQ + + ER++ T+ +LS + +D+W LP LAY ++ + +P+FLMFGR+ R+PVD++ P P T +A+ R+ + +E+ R N + + + + + + G+KV LY P+ G N KL PWRG PYTI ++S VVYR+ K N+ + VH LK
Sbjct: 407 GRNFESAVFKEIIDILGIKKTRTTPYHPQSDGLVERMNRTLKDILSKLVNERQDDWDRCLPQALLAYRSTVQTSTGFSPHFLMFGRETRIPVDLMTPEPPQAEVPPTTSEYAEKLRKRFERTYELTRVNTKKSSERYKDYYDAKAKDTTYNVGEKVWLYVPFVKK-GKNLKLSRPWRG-PYTIVKKISDVVYRIEKNANKRNRLVVHYNRLK 616
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A7D9JVW0_PARCT (Transposon Ty3-G Gag-Pol poly n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JVW0_PARCT) HSP 1 Score: 129 bits (323), Expect = 3.780e-28 Identity = 77/223 (34.53%), Postives = 119/223 (53.36%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTP-DTETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPVVYRV-KRPNETREVSVHLAHLKQYHARDTPPAP 664
G FE+ + ++ I G +KTRTTPY PQ + + ER++ T+ +LS + +D+W LP LAY ++ + +P+FLMFGR+ R+PVD++ P P T +A+ R+ + +E+ R N + + + A + + + G+KV LY P+ G N KL PWRG PYTI ++S VVYR+ K N+ + VH LK R P
Sbjct: 471 GRNFESAVFKEIIDIPGIKKTRTTPYHPQSDGLVERMNRTLKDILSKLVNERQDDWDRCLPQALLAYRSTVQTSTGFSPHFLMFGRETRIPVDLMTPEPPQAEVPLTTSEYAEKLRKRFERTYELTRVNTKKSSERYKAYYDAKAKDTTYNVGEKVWLYVPFVKK-GKNLKLSRPWRG-PYTIVKKISDVVYRIEKNANKRNRLVVHYNRLKPCFERPLKSLP 691
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A803K8U4_XENTR (Integrase catalytic domain-containing protein n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803K8U4_XENTR) HSP 1 Score: 123 bits (308), Expect = 8.650e-28 Identity = 79/216 (36.57%), Postives = 119/216 (55.09%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDT-----ETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPV-VYRVKRPNETREVSV-HLAHL 628
G +FE+K++H+L +LG QK+RTTPY PQG+ ER + T+ ML S + +W+ + + AYN++ + +PYFLMFGR+ARLPVD+ G+ T DT +++ + + NLQ AFE A+ R + AR +Q +F +PG +VLL G + KL W PY ICSQL + VY+++ + + H HL
Sbjct: 104 GRDFESKLVHELLLLLGVQKSRTTPYHPQGDPQPERFNRTLLDMLGTLTSEQKTHWSHHVATLVHAYNSTKHDATGYSPYFLMFGREARLPVDMAFGV----TADDTPVKSHQSYVERLKRNLQQAFEKAQVASGNRNQQNKARYDQKVKFHDLQPGDRVLLRN--LGIPGKH-KLADRWGSQPYIICSQLPNIPVYQIRPEGKNHPIKTWHRNHL 312
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Match: A0A1B8XVN2_XENTR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A1B8XVN2_XENTR) HSP 1 Score: 123 bits (309), Expect = 2.950e-27 Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 2
Query: 2 GTEFENKIIHQLQTILGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLPVDVILGIPHVGTTPDT-----ETFAKNTRENLQIAFEIARQNLTERATKQAARNEQLPQFPVFKPGQKVLLYKPYQDSDGPNPKLLLPWRGGPYTICSQLSPV-VYRVKRPNETREVSV-HLAHL 628
G +FE+K++H+L +LG QK+RTTPY PQG+ ER + T+ ML S + +W+ + + AYN++ + +PYFLMFGR+ARLPVD+ G+ T DT +++ + + NLQ AFE A+ R + AR +Q +F +PG +VLL G + KL W PY ICSQL + VY+++ + V H HL
Sbjct: 71 GRDFESKLVHELLLLLGVQKSRTTPYHPQGDPQPERFNRTLLDMLGTLTSEQKTHWSHHVATLVHAYNSTKHDATGYSPYFLMFGREARLPVDMAFGV----TADDTPVKSHQSYVERLKRNLQQAFEKAQVASGNRNQQNKARYDQKVKFHDLQPGDRVLLRN--LGIPGKH-KLADRWGSQPYIICSQLPNIPVYQIRPEGKNHPVKTWHRNHL 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1468.1 >prot_P-fluviatile_contig12.1468.1 ID=prot_P-fluviatile_contig12.1468.1|Name=mRNA_P-fluviatile_contig12.1468.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=391bp MHAMLSMHNSMDRDNWAELLPMVQLAYNTSFNKTMQETPYFLMFGRQARLback to top mRNA from alignment at P-fluviatile_contig12:2049081..2050511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1468.1 ID=mRNA_P-fluviatile_contig12.1468.1|Name=mRNA_P-fluviatile_contig12.1468.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1431bp|location=Sequence derived from alignment at P-fluviatile_contig12:2049081..2050511+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:2049081..2050511+ >mRNA_P-fluviatile_contig12.1468.1 ID=mRNA_P-fluviatile_contig12.1468.1|Name=mRNA_P-fluviatile_contig12.1468.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2346bp|location=Sequence derived from alignment at P-fluviatile_contig12:2049081..2050511+ (Porterinema fluviatile SAG_2381)back to top |