prot_P-fluviatile_contig9.15067.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15067.1
Unique Nameprot_P-fluviatile_contig9.15067.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length448
Homology
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE)

HSP 1 Score: 634 bits (1635), Expect = 2.700e-225
Identity = 322/455 (70.77%), Postives = 372/455 (81.76%), Query Frame = 0
Query:    1 MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGAGASQREPENSTKADTRGVTAAGVG--------NSRKFSVVPYGFNKPVHPNHAECSRDTWDSVSKCNVILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAPACRAVVSAVRLCVSRGDGVPSTPPLELPFVQELRRGGSGSARALNRKVVLWGGSATVGATALYLSGGTWLAVGGLSLFIFLCFVKYALVGDVVP 447
            M  R+KPLV ++HSASSKST  G+DLA++LGVCLQ+GGYSDVRI+GF+GA   +R P +S KAD       GV          S +F VVPY  +KP +PNHAEC RDTW+S+SKCNVIL+CVDPAD SACA AL+++VE+GSDKAIISFDLG++NH A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERLSK+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH  AAL G  LR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS   LRFPPM APAMQADL+ GRDTSVAWT+EEIVRIADKHKG+APAC AV+SAV+ CVS GDGVPST P +LPFV EL  GGS S+RALNRK+ LW G A +G TAL L GG WLA GG+   IFL FVK+A++GDVVP
Sbjct:    1 MALRKKPLVAVVHSASSKSTSAGEDLAIYLGVCLQLGGYSDVRIVGFDGA---KRTPRSSNKADGGADDVGGVPPRQRQQRKQSGRFLVVPYAGDKPKYPNHAECFRDTWESLSKCNVILICVDPADTSACALALSSAVERGSDKAIISFDLGIKNHMAVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLSKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRKLALWCGCAALGTTALGLMGGAWLAAGGVMFAIFLTFVKFAVLGDVVP 452          
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 2.070e-103
Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 0
Query:  151 AAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRI 344
            A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERL+K+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH AAAL G PLR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS   LRFPPM APAMQADL+ GRDTSVAWT+EEIVRI
Sbjct:    2 AVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLTKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195          
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: UPI001B14A284 (2-dehydropantoate 2-reductase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B14A284)

HSP 1 Score: 72.4 bits (176), Expect = 2.730e-10
Identity = 71/244 (29.10%), Postives = 111/244 (45.49%), Query Frame = 0
Query:  110 VILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAP 353
            ++L+CV     +  A  LAA +  G+   ++S   G+ N A A E      L  L   V  +++        R   G      RL+ R       +V +    G+P+    ++     G ++ N  +   AL+GLPLR+ +  R  R   AA++ EGL A+A A       AA P       +L  +L LP+P+F LV+   LR       +M  DL++GR T +     E+VR+A +H G AP
Sbjct:   80 LVLLCVKSGATAEAAIELAAKLPAGTT--VLSLQNGISNAAVAAE--AAPRLHVLPAMVPYNIAEIGPGAFHRGTAG------RLAVRNDPALRSWVAVFERAGVPMDLHADLLPIQWGKLLLNLNNPVNALSGLPLRDELLQRGYRRCLAALMDEGLAALAKAGIEPAQLAAVPA-----HKLPGILRLPTPVFRLVAARMLRIDAKARSSMADDLALGRRTEIDALCGEVVRLAARHGGQAP 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L503_9PHAE2.700e-22570.77ApbA_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FJE1_ECTSI2.070e-10379.902-dehydropantoate 2-reductase n=1 Tax=Ectocarpus s... [more]
UPI001B14A2842.730e-1029.102-dehydropantoate 2-reductase n=1 Tax=Variovorax s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 72..219
e-value: 3.1E-6
score: 28.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 423..441
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 442..447
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 313..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..417
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..292
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 418..422
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..312
NoneNo IPR availableTMHMMTMhelixcoord: 420..442
IPR013752Ketopantoate reductase, C-terminal domainPFAMPF08546ApbA_Ccoord: 232..364
e-value: 3.0E-5
score: 24.2
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3D1.10.1040.10coord: 229..368
e-value: 3.5E-6
score: 29.0
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilySUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 233..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:633226..638916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15067.1mRNA_P-fluviatile_contig9.15067.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 633010..638929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15067.1 ID=prot_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=448bp
MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGA
GASQREPENSTKADTRGVTAAGVGNSRKFSVVPYGFNKPVHPNHAECSRD
TWDSVSKCNVILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHA
AAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSK
RGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLV
RDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLP
SPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKG
AAPACRAVVSAVRLCVSRGDGVPSTPPLELPFVQELRRGGSGSARALNRK
VVLWGGSATVGATALYLSGGTWLAVGGLSLFIFLCFVKYALVGDVVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013752KPA_reductase
IPR0133286PGD_dom2
IPR0089276-PGluconate_DH-like_C_sf