mRNA_P-fluviatile_contig9.15067.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE) HSP 1 Score: 636 bits (1640), Expect = 8.510e-225 Identity = 322/455 (70.77%), Postives = 372/455 (81.76%), Query Frame = 1
Query: 217 MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGAGASQREPENSTKADTRGVTAAGVG--------NSRKFSVVPYGFNKPVHPNHAECSRDTWDSVSKCNVILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAPACRAVVSAVRLCVSRGDGVPSTPPLELPFVQELRRGGSGSARALNRKVVLWGGSATVGATALYLSGGTWLAVGGLSLFIFLCFVKYALVGDVVP 1557
M R+KPLV ++HSASSKST G+DLA++LGVCLQ+GGYSDVRI+GF+GA +R P +S KAD GV S +F VVPY +KP +PNHAEC RDTW+S+SKCNVIL+CVDPAD SACA AL+++VE+GSDKAIISFDLG++NH A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERLSK+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH AAL G LR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS LRFPPM APAMQADL+ GRDTSVAWT+EEIVRIADKHKG+APAC AV+SAV+ CVS GDGVPST P +LPFV EL GGS S+RALNRK+ LW G A +G TAL L GG WLA GG+ IFL FVK+A++GDVVP
Sbjct: 1 MALRKKPLVAVVHSASSKSTSAGEDLAIYLGVCLQLGGYSDVRIVGFDGA---KRTPRSSNKADGGADDVGGVPPRQRQQRKQSGRFLVVPYAGDKPKYPNHAECFRDTWESLSKCNVILICVDPADTSACALALSSAVERGSDKAIISFDLGIKNHMAVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLSKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRKLALWCGCAALGTTALGLMGGAWLAAGGVMFAIFLTFVKFAVLGDVVP 452
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI) HSP 1 Score: 315 bits (806), Expect = 2.250e-102 Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 1
Query: 667 AAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRI 1248
A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERL+K+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH AAAL G PLR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS LRFPPM APAMQADL+ GRDTSVAWT+EEIVRI
Sbjct: 2 AVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLTKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: UPI001B14A284 (2-dehydropantoate 2-reductase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B14A284) HSP 1 Score: 72.4 bits (176), Expect = 3.670e-10 Identity = 71/244 (29.10%), Postives = 111/244 (45.49%), Query Frame = 1
Query: 544 VILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAP 1275
++L+CV + A LAA + G+ ++S G+ N A A E L L V +++ R G RL+ R +V + G+P+ ++ G ++ N + AL+GLPLR+ + R R AA++ EGL A+A A AA P +L +L LP+P+F LV+ LR +M DL++GR T + E+VR+A +H G AP
Sbjct: 80 LVLLCVKSGATAEAAIELAAKLPAGTT--VLSLQNGISNAAVAAE--AAPRLHVLPAMVPYNIAEIGPGAFHRGTAG------RLAVRNDPALRSWVAVFERAGVPMDLHADLLPIQWGKLLLNLNNPVNALSGLPLRDELLQRGYRRCLAALMDEGLAALAKAGIEPAQLAAVPA-----HKLPGILRLPTPVFRLVAARMLRIDAKARSSMADDLALGRRTEIDALCGEVVRLAARHGGQAP 308 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15067.1 >prot_P-fluviatile_contig9.15067.1 ID=prot_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=448bp MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGAback to top mRNA from alignment at P-fluviatile_contig9:633010..638929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15067.1 ID=mRNA_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5920bp|location=Sequence derived from alignment at P-fluviatile_contig9:633010..638929+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:633010..638929+ >mRNA_P-fluviatile_contig9.15067.1 ID=mRNA_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2688bp|location=Sequence derived from alignment at P-fluviatile_contig9:633010..638929+ (Porterinema fluviatile SAG_2381)back to top |