mRNA_P-fluviatile_contig9.15067.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15067.1
Unique NamemRNA_P-fluviatile_contig9.15067.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE)

HSP 1 Score: 636 bits (1640), Expect = 8.510e-225
Identity = 322/455 (70.77%), Postives = 372/455 (81.76%), Query Frame = 1
Query:  217 MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGAGASQREPENSTKADTRGVTAAGVG--------NSRKFSVVPYGFNKPVHPNHAECSRDTWDSVSKCNVILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAPACRAVVSAVRLCVSRGDGVPSTPPLELPFVQELRRGGSGSARALNRKVVLWGGSATVGATALYLSGGTWLAVGGLSLFIFLCFVKYALVGDVVP 1557
            M  R+KPLV ++HSASSKST  G+DLA++LGVCLQ+GGYSDVRI+GF+GA   +R P +S KAD       GV          S +F VVPY  +KP +PNHAEC RDTW+S+SKCNVIL+CVDPAD SACA AL+++VE+GSDKAIISFDLG++NH A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERLSK+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH  AAL G  LR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS   LRFPPM APAMQADL+ GRDTSVAWT+EEIVRIADKHKG+APAC AV+SAV+ CVS GDGVPST P +LPFV EL  GGS S+RALNRK+ LW G A +G TAL L GG WLA GG+   IFL FVK+A++GDVVP
Sbjct:    1 MALRKKPLVAVVHSASSKSTSAGEDLAIYLGVCLQLGGYSDVRIVGFDGA---KRTPRSSNKADGGADDVGGVPPRQRQQRKQSGRFLVVPYAGDKPKYPNHAECFRDTWESLSKCNVILICVDPADTSACALALSSAVERGSDKAIISFDLGIKNHMAVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLSKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRKLALWCGCAALGTTALGLMGGAWLAAGGVMFAIFLTFVKFAVLGDVVP 452          
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 2.250e-102
Identity = 155/194 (79.90%), Postives = 172/194 (88.66%), Query Frame = 1
Query:  667 AAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRI 1248
            A EEHLG H+L+FL GAVGISV+RSPV+GHLRCLGGGSLV+ERL+K+QSKRGVKFV+LLR+GGIPV HCKNV SY HG VIFNTVH AAAL G PLR+LVRDR+ARLLWAAMI EGL+A+ LAARGG WRAANPCC +TLPQLEL LCLP+ LF LVS   LRFPPM APAMQADL+ GRDTSVAWT+EEIVRI
Sbjct:    2 AVEEHLGNHNLVFLGGAVGISVARSPVDGHLRCLGGGSLVLERLTKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195          
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Match: UPI001B14A284 (2-dehydropantoate 2-reductase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=UPI001B14A284)

HSP 1 Score: 72.4 bits (176), Expect = 3.670e-10
Identity = 71/244 (29.10%), Postives = 111/244 (45.49%), Query Frame = 1
Query:  544 VILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHAAAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSKRGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLVRDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLPSPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKGAAP 1275
            ++L+CV     +  A  LAA +  G+   ++S   G+ N A A E      L  L   V  +++        R   G      RL+ R       +V +    G+P+    ++     G ++ N  +   AL+GLPLR+ +  R  R   AA++ EGL A+A A       AA P       +L  +L LP+P+F LV+   LR       +M  DL++GR T +     E+VR+A +H G AP
Sbjct:   80 LVLLCVKSGATAEAAIELAAKLPAGTT--VLSLQNGISNAAVAAE--AAPRLHVLPAMVPYNIAEIGPGAFHRGTAG------RLAVRNDPALRSWVAVFERAGVPMDLHADLLPIQWGKLLLNLNNPVNALSGLPLRDELLQRGYRRCLAALMDEGLAALAKAGIEPAQLAAVPA-----HKLPGILRLPTPVFRLVAARMLRIDAKARSSMADDLALGRRTEIDALCGEVVRLAARHGGQAP 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L503_9PHAE8.510e-22570.77ApbA_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FJE1_ECTSI2.250e-10279.902-dehydropantoate 2-reductase n=1 Tax=Ectocarpus s... [more]
UPI001B14A2843.670e-1029.102-dehydropantoate 2-reductase n=1 Tax=Variovorax s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:633010..638929 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score90.1
Seed ortholog evalue2.8e-15
Seed eggNOG ortholog1298865.H978DRAFT_0723
Preferred namepanE
KEGG rclassRC00726
KEGG koko:K00077
KEGG ReactionR02472
KEGG Pathwayko00770,ko01100,ko01110,map00770,map01100,map01110
KEGG ModuleM00119
EggNOG free text desc.Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
EggNOG OGs1N0M5@1224,1RNZY@1236,466DW@72275,COG1893@1,COG1893@2
EC1.1.1.169
COG Functional cat.H
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog description2-dehydropantoate 2-reductase
Ec32 orthologEc-14_006010.1
Exons9
Model size1573
Cds size1344
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817311.988684-UTR-P-fluviatile_contig9:633009..6332251622817311.988684-UTR-P-fluviatile_contig9:633009..633225Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 633010..633225 +
1693572020.3568718-UTR-P-fluviatile_contig9:633009..6332251693572020.3568718-UTR-P-fluviatile_contig9:633009..633225Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 633010..633225 +
1622817312.105199-UTR-P-fluviatile_contig9:638916..6389291622817312.105199-UTR-P-fluviatile_contig9:638916..638929Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 638917..638929 +
1693572020.489408-UTR-P-fluviatile_contig9:638916..6389291693572020.489408-UTR-P-fluviatile_contig9:638916..638929Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 638917..638929 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817311.9997742-CDS-P-fluviatile_contig9:633225..6333371622817311.9997742-CDS-P-fluviatile_contig9:633225..633337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 633226..633337 +
1693572020.3685932-CDS-P-fluviatile_contig9:633225..6333371693572020.3685932-CDS-P-fluviatile_contig9:633225..633337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 633226..633337 +
1622817312.0128706-CDS-P-fluviatile_contig9:634138..6343051622817312.0128706-CDS-P-fluviatile_contig9:634138..634305Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 634139..634305 +
1693572020.3819768-CDS-P-fluviatile_contig9:634138..6343051693572020.3819768-CDS-P-fluviatile_contig9:634138..634305Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 634139..634305 +
1622817312.026209-CDS-P-fluviatile_contig9:634901..6350861622817312.026209-CDS-P-fluviatile_contig9:634901..635086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 634902..635086 +
1693572020.392632-CDS-P-fluviatile_contig9:634901..6350861693572020.392632-CDS-P-fluviatile_contig9:634901..635086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 634902..635086 +
1622817312.0368707-CDS-P-fluviatile_contig9:635336..6355421622817312.0368707-CDS-P-fluviatile_contig9:635336..635542Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 635337..635542 +
1693572020.408945-CDS-P-fluviatile_contig9:635336..6355421693572020.408945-CDS-P-fluviatile_contig9:635336..635542Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 635337..635542 +
1622817312.0484824-CDS-P-fluviatile_contig9:636113..6362471622817312.0484824-CDS-P-fluviatile_contig9:636113..636247Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 636114..636247 +
1693572020.4306796-CDS-P-fluviatile_contig9:636113..6362471693572020.4306796-CDS-P-fluviatile_contig9:636113..636247Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 636114..636247 +
1622817312.0592413-CDS-P-fluviatile_contig9:636746..6368651622817312.0592413-CDS-P-fluviatile_contig9:636746..636865Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 636747..636865 +
1693572020.4443028-CDS-P-fluviatile_contig9:636746..6368651693572020.4443028-CDS-P-fluviatile_contig9:636746..636865Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 636747..636865 +
1622817312.0715642-CDS-P-fluviatile_contig9:637221..6373311622817312.0715642-CDS-P-fluviatile_contig9:637221..637331Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 637222..637331 +
1693572020.4555306-CDS-P-fluviatile_contig9:637221..6373311693572020.4555306-CDS-P-fluviatile_contig9:637221..637331Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 637222..637331 +
1622817312.0835352-CDS-P-fluviatile_contig9:637755..6379221622817312.0835352-CDS-P-fluviatile_contig9:637755..637922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 637756..637922 +
1693572020.4647975-CDS-P-fluviatile_contig9:637755..6379221693572020.4647975-CDS-P-fluviatile_contig9:637755..637922Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 637756..637922 +
1622817312.0943604-CDS-P-fluviatile_contig9:638772..6389161622817312.0943604-CDS-P-fluviatile_contig9:638772..638916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 638773..638916 +
1693572020.4728596-CDS-P-fluviatile_contig9:638772..6389161693572020.4728596-CDS-P-fluviatile_contig9:638772..638916Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 638773..638916 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15067.1prot_P-fluviatile_contig9.15067.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 633226..638916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15067.1

>prot_P-fluviatile_contig9.15067.1 ID=prot_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=448bp
MGSRRKPLVGIIHSASSKSTITGDDLAVFLGVCLQMGGYSDVRIIGFNGA
GASQREPENSTKADTRGVTAAGVGNSRKFSVVPYGFNKPVHPNHAECSRD
TWDSVSKCNVILVCVDPADVSACASALAASVEKGSDKAIISFDLGVRNHA
AAEEHLGGHDLIFLAGAVGISVSRSPVNGHLRCLGGGSLVIERLSKRQSK
RGVKFVDLLRTGGIPVRHCKNVTSYAHGAVIFNTVHVAAALTGLPLRNLV
RDRYARLLWAAMIGEGLEAMALAARGGGWRAANPCCSLTLPQLELLLCLP
SPLFGLVSRWFLRFPPMFAPAMQADLSVGRDTSVAWTIEEIVRIADKHKG
AAPACRAVVSAVRLCVSRGDGVPSTPPLELPFVQELRRGGSGSARALNRK
VVLWGGSATVGATALYLSGGTWLAVGGLSLFIFLCFVKYALVGDVVP*
back to top

mRNA from alignment at P-fluviatile_contig9:633010..638929+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15067.1 ID=mRNA_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5920bp|location=Sequence derived from alignment at P-fluviatile_contig9:633010..638929+ (Porterinema fluviatile SAG_2381)
CAGGAAGATACACCGCTGCCAACGCGGCAAGATATCGCGTGAGAGCTCTC AAGTCTTCTGTGCAGCACAAGCAGGGAGGTAGAACTCGTTGCAGTCGAGA TATCCAGTAGTCAGGGGGAGTCCTTGCTTGTGCGGAAAGACAGCATCAAT TCCACCGCTCAAGCGATTTTGCGCATTGCAAGCAATCCCGTGGATATCGT CAAGGCGAGAGGCAACATGGGTTCGCGGAGGAAGCCGTTGGTTGGGATCA TCCACTCAGCCTCGTCCAAGAGCACGATAACTGGAGATGATCTGGCGGTG TTTCTTGGAGTCTGCCTACAAATGGGAGGTATATCCGTAATTTGTGACAG TCCCGAGAGGAAAACTCTGCTCCTGTACCTGACGTTGCTGCCACACGTCG AAATCACATTTGATGGTGTATACCGCGCCAAACCTGGTACCAACGGACAC AGGCAAACCTTCTTCCTGTTTTACCCCGAGTGAAATGAAAAAAATGTCCT CTGCTAGTTTTCATGTTGCCTACACAGCAGAGGGGAACTACCATATCGTC GGACGTCATACGGCAAGAGCTGCAGCGGCTGCTGCATACTGGCTTATGCG CAATTTTTCATGCTGCAAGATTGAAATGTTTGAGCGCATCGAATTCGCCT TTCTCGGGAAGGCAATCCTAGCCTTGCCATGCATAAGAGTTGGGTCAGGG TGTTTCGCAGCACTACATATGCATCCTAGTCAAGATCCCTCTTCGTAGGT ACCGTACATGAGATCTTCACGAGGTGTGCATTGTAGCACGTGTCCAAATG AATACTAGTATTTGATTTAAGCATCTCTGGTGTCGATAGTCGTGCTATAC CGACAAGTGTTCTGTCGAGAGCCATGTCATGTAAGGGGTAGTTCCCCAAA TTTGACCACGACAAGCAAAGGATTTCACCACTCTACAGGTATTTGCTCGA ACGAGGCGCTCCCAGCAGTACCCCACTTGTCGCGATAGTTCCCTCCATAA AGGTGAAGCTAAAAGGCATCAATACAACAACGCACGCATGTAGGCAGGAC ACCGACCCTTGGCTCAAACGCTATTAAACCTTCACGTGCCCATTGTGAAA TCGGAAACAATCATCCGCGGAACGTGCAGGCTACTCCGATGTTCGAATCA TCGGCTTCAACGGCGCGGGAGCATCTCAACGTGAGCCAGAGAATTCGACG AAGGCGGACACTCGCGGTGTTACTGCTGCCGGCGTTGGAAATAGCCGCAA GTTTTCGGTGGTTCCCTACGGCTTTAACAAGCCCGTTCATCCCAACGTGA GAAACGTTCTCATCATGTTAGAAAAGTGAAAAACAGCAAGAAAAGTTGCA TTTGGCTTATCCGTGTCTATTGGGCCTGAAGCCGGGAAGTTCGCGTCTTC GTACGCGTGCTTCGTTCGGCAGCGTCACAAGTGAAATGGACGAATGGCTC TGCGAAGGCCACCAAAGTCGCGCCCTGGACAGAGATACACCATCGCACAG TGTTAGGAGTATGCTTTACCTCTGAAGAGAATTCGTCGACGTGGGGCGAT TTGACAACCCCCTTCCAGTCGAGCTCATCAGTAGTAGTGCGTCACCATCC AAACCTCAGCGGAGCCACCCCGTAAATAATCACAATCACAGACCTCCCTC CGGGCGCACGCACAAATTTGTCCTGCAAACTCACCAGGGACCCCGTGGAC GGCATCGTCACCACCCGACAGCGTACTTGATAACGCACAAAGATAACACT AAACACCTTAACGCTTCACAAGCCCACATACCGCCCCGGTCTCACACACA CGTGCCCGCCACCCCTCTGTTGGACAAACACCACCCTTGCAACCAACCCA AAATAAATTGAACGCGACGCGGCTCGCCAAAACAAAAACAAGCACGCCGA GTGTAGCCGGGACACGTGGGATTCGGTCTCGAAGTGCAACGTCATCCTCG TCTGCGTAGACCCCGCGGATGTGTCCGCCTGCGCCTCCGCCCTAGCGGCC TCGGTGGAGAAGGGCAGCGACAAGGCCATCATCAGCTTCGACCTCGGGGT TCGGAACCATGCGGCAGCCGAGGAGCAGTGAGTCCTCAACCGCGCTTTTC CTTGTGTTTATTACACCTTAGGCGGGCACAGTATCGGGAGCGAGGCGGGG CAAGTGGGGGATTACGGGGCTGAAGGAGGCATACATGTGTTCGTTACTGT AGCCAAGCTTCTTTTTTTTGTATTTACACGGCCTTCATGTCGTCCCAACG ACAGCAAGCAGTCCGCGTCATCGAGAAGTCAGTCACCATCATCACCCCAA AAATGCTCCTAACCTGCACGCACACAGCTTGGGCGGCCACGACCTCATCT TCCTGGCCGGAGCGGTCGGGATCAGCGTATCCAGGAGTCCAGTCAACGGC CACCTCCGGTGCTTGGGAGGCGGGTCTCTGGTGATAGAGCGGCTGAGCAA GCGGCAGTCCAAGCGAGGGGTGAAGTTCGTCGACCTACTACGGACCGGCG GGATTCCTGTTCGGCACTGCAAGAACGTCACCTGTGAGTTAGTTGCGAAG GATCTTTCAGGCATGCTCCCTTGAATTCCTGGCCTCGACAAATTGAGATT GGGGTTGCTACGTGGTTGACTTGATTTTCCTCTAAGGGTGGAATGTTTGT CGTGTCGGTACCCGATACACGAAGCCAGGGCGGTTTGTTCTTTTTTGCTT CGTCAACACGCCCCCGCGTACTATGGCCCAAGGTGACCACAGCCGTCCGT GTTGGAGCACGACAAAAAATTGTTGACAGAGATTGCCTGGCCGCGCGTAG CCGCCAGTAGCGTCGGGCCATGGGGGCCAACTGGAGCGAGGTGCCACCTG CGGTTCGACCACTTTTTCCATTACATCCTCCCAATCCTCTCCGTCGAAGG TCCCATCGCTCTGTCTAATCGGGTGTGGTGTTGCAACGCACACCGATATC GACACTTCAGTAATCGGACGCGGAGGGTGCTCGCTTCTATCGCGTTCACG CGCGCAAGAACTCGCGAACGACCATCTCTCTTGCTCTGAACCCCCATCCC TTGCCGCTCCCAAACGCACACGCCAAACCCCTTCACGCGTACCTACCTGT ACAGCCTACGCACACGGGGCGGTAATATTCAACACGGTGCACGTTGCCGC AGCTCTCACCGGTTTGCCGCTGCGGAACCTGGTGCGAGATCGGTATGCAC GGCTTCTCTGGGCAGCCATGATCGGCGAGGGTTTAGAGGTATGGTTGGGA GGGAAGGAGGGGGCGCCTGTGTACCATGATGAGTGCTTGCAGCTTGAGCG GAAGTTTCGTTCGACCGCGCGGTGGATATGGCCAAGGGGGGAGTCGCGAG TGTAAAAAGAAGGTACAAGATAGGTTGATTTGGTACGAATCTCGTGTGCT ACCACACCCGTGTTGCTATTGAATTCAAGTGGTTTGTGCCTTCGAGCAGA GTGGGTGAGACAGGAGTAGAGGATAAGAGGAGGGCTCGGCTAGGCGAGGG ACACGGCGAAGGGCCCCTCTGCGACACGCCCCGTCTTCACCGCCCCACTC CGAAGCACACGTCACACTCTGTGATGAGACAGCGGGAGGGCAGGCGGGTT GCTTCCGGACACGCCGCTTGATACCTTCAAGTCGGTTGAAAGTTGGCTTG TCCCTAGAGCTTGCATCGTTGTGCTGACTCACTGACCCGCCGCGGTCGAC GGCGGGGTGGTCGTGACGCCCGGGTGGCCTGAATCAGGCGATGGCTCTGG CGGCGCGAGGCGGAGGCTGGAGGGCGGCGAACCCTTGCTGCAGCCTCACC CTGCCGCAGCTGGAGCTACTCCTCTGCCTGCCGTCGCCCTTGTTTGGGCT CGTGAGGTGAGCGGAGTGGTCGTCAGACCTGCGTGTACCGAGGCCACACT CGCGACATTCGCTGAATTCCTGAGAGACACAAAGCCTTCCTTCGATGCTT GGTTTATTCTCTACCGCAACTGATGTGATGCGCACTTAAGAGCACATGAT GTGTGTTGCCTCCGGTGCGGGTTTTCATTCCTGCTTACCGTACTGTAGAC TTTTCCTGTCAAGCACGAAATGGGCCGTCACTTCCTTCTCCTTCACAACG TTGCCGCGGTGAAGACAACAAAAGGCCCCCTCCCCCTCCCTCCCTCCTTT TTCATTTTTCATGCCTTGGCTGCGCCTGCGTTGACGCTGGGGCTGAAAAT TTGGAAAAGCAGTCGCTGGTTTCTGCGGTTCCCTCCGATGTTCGCACCCG CGATGCAGGCGGATTTGTCGGTCGGACGGGATACGAGCGTGGCGTGGACG ATCGAAGAAATCGTCCGCATAGGTGGAGTCTCAAAATATTGTGTATTTCA GGTCGGCGAGAGGGCGGGAGTGGGGGTGGGCGTACTTTTCGAAAAGGGAG GCCGTGATTTGGACCGGAATATTTTTCCTGTTTCTTTTTTTGTTGGTGTC GACTCGGCTCGGAAGGTCTTGCGATCCTTTGCCGAATCGCGCTTCCTTGT TTTGCTGTTGGTGGCATTTTCGTCGTTGCACTCGGCGCTGCTGCAATTGA TATTCTCGTTTGTTCACCCGTCCCTTCAGGCCTCCGCTTGCCCTCAGCCT TGTCGCCATTCGCATAGTGCTCGTGCCTACCTACCCGGTCCGAGACGTCC CCCCGTCCTTCCGTTTAAAAAGTGCTCGCTTTAATATCCCCTTGGTTTGT GCTTCCTTTTTCTGTTCCTCGAACACCACCGGAAACGGACACAAAGCGGA CAAGCATAAGGGAGCGGCACCAGCTTGCCGCGCGGTCGTCTCCGCCGTAA GACTGTGCGTCTCCCGAGGCGATGGGGTTCCCAGCACGCCGCCACTAGAA CTCCCTTTCGTCCAGGAATTGCGCCGCGGTGGCTCGGGTAGCGCTCGAGC TTTAAACCGGAAGGTACATGGTTTGATGCGTACAGTTTCGCGTGCGCGTT ATCCCGATGAGGGCAGCCTCTCCTGTTGTTTATGCTCCATGTGTAAGAGA GACGAGGTCCCGGCGCTCGCTGTGTTCGCATTTAAAATTCCTATGGTTAT GGTTTTGTTTTCACCCCACGCAAGGTCGCAAACACAAACTGCTTGTTCCA TGACCACAACTCCCGCCAGACTTGTGACGCTTCGAGTCGGAAGGGGTGCA ATTTACTTGCGTCATTTCTGTATCCCTACTCTCGCGCTCGTGGACCCACT TCGTCTCACCACCCCCCTCGAAAGACACAGCAGTCCCTTGGATTCACTCC AACCGAGCTCGGCTGGGATCCCCCTACCGCCCGATTTTCTCGTAGTTTCG TTGCCCCCCCTTCGGGAACGTAGAAGGAAGTTTAGGAAGGTAGACGACGA CGAAGACAAGTTCAAATGTGACTGCGATGCCGAATGCGAAGACCGGGTAC ATGTAGTTGCGGAATGCCCGTTATACGATCAGGAGAGAGAAGGGTACATG GTTGAGCTGGAAAAAGTAGACAGTCGGTATAGAGAGAAGTTTGAGGCATG GAACAAAGAGGAGAAGACGGTAGCGGTACTCGGGTGCAATATGTGGCGCA GGAAGGACAGGTACAAAGTAGACAGGTTAGGGCAAACATTTTTGAGCCAC CTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGGTCGATCCTGCGG GAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCGAACAACTA AGGCATGCAGAACATGAGTACCCCCCCTTCCCCTTCCTTCGTCGTATCCC CGAAAACTGGCAGGTGGTGCTGTGGGGAGGCTCGGCGACTGTCGGGGCGA CGGCGCTTTACCTGTCGGGCGGGACCTGGCTCGCCGTGGGAGGCTTATCG CTCTTCATTTTCTTGTGCTTCGTGAAGTACGCCCTAGTAGGCGACGTGGT CCCATGACCGAAGTGGTTGC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig9:633010..638929+

>mRNA_P-fluviatile_contig9.15067.1 ID=mRNA_P-fluviatile_contig9.15067.1|Name=mRNA_P-fluviatile_contig9.15067.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2688bp|location=Sequence derived from alignment at P-fluviatile_contig9:633010..638929+ (Porterinema fluviatile SAG_2381)
ATGGGTTCGCGGAGGAAGCCGTTGGTTGGGATCATCCACTCAGCCTCGTC
CAAGAGCACGATAACTGGAGATGATCTGGCGGTGTTTCTTGGAGTCTGCC
TACAAATGGGAGATGGGTTCGCGGAGGAAGCCGTTGGTTGGGATCATCCA
CTCAGCCTCGTCCAAGAGCACGATAACTGGAGATGATCTGGCGGTGTTTC
TTGGAGTCTGCCTACAAATGGGAGGCTACTCCGATGTTCGAATCATCGGC
TTCAACGGCGCGGGAGCATCTCAACGTGAGCCAGAGAATTCGACGAAGGC
GGACACTCGCGGTGTTACTGCTGCCGGCGTTGGAAATAGCCGCAAGTTTT
CGGTGGTTCCCTACGGCTTTAACAAGCCCGTTCATCCCAACGCTACTCCG
ATGTTCGAATCATCGGCTTCAACGGCGCGGGAGCATCTCAACGTGAGCCA
GAGAATTCGACGAAGGCGGACACTCGCGGTGTTACTGCTGCCGGCGTTGG
AAATAGCCGCAAGTTTTCGGTGGTTCCCTACGGCTTTAACAAGCCCGTTC
ATCCCAACCACGCCGAGTGTAGCCGGGACACGTGGGATTCGGTCTCGAAG
TGCAACGTCATCCTCGTCTGCGTAGACCCCGCGGATGTGTCCGCCTGCGC
CTCCGCCCTAGCGGCCTCGGTGGAGAAGGGCAGCGACAAGGCCATCATCA
GCTTCGACCTCGGGGTTCGGAACCATGCGGCAGCCGAGGAGCACACGCCG
AGTGTAGCCGGGACACGTGGGATTCGGTCTCGAAGTGCAACGTCATCCTC
GTCTGCGTAGACCCCGCGGATGTGTCCGCCTGCGCCTCCGCCCTAGCGGC
CTCGGTGGAGAAGGGCAGCGACAAGGCCATCATCAGCTTCGACCTCGGGG
TTCGGAACCATGCGGCAGCCGAGGAGCACTTGGGCGGCCACGACCTCATC
TTCCTGGCCGGAGCGGTCGGGATCAGCGTATCCAGGAGTCCAGTCAACGG
CCACCTCCGGTGCTTGGGAGGCGGGTCTCTGGTGATAGAGCGGCTGAGCA
AGCGGCAGTCCAAGCGAGGGGTGAAGTTCGTCGACCTACTACGGACCGGC
GGGATTCCTGTTCGGCACTGCAAGAACGTCACCTCTTGGGCGGCCACGAC
CTCATCTTCCTGGCCGGAGCGGTCGGGATCAGCGTATCCAGGAGTCCAGT
CAACGGCCACCTCCGGTGCTTGGGAGGCGGGTCTCTGGTGATAGAGCGGC
TGAGCAAGCGGCAGTCCAAGCGAGGGGTGAAGTTCGTCGACCTACTACGG
ACCGGCGGGATTCCTGTTCGGCACTGCAAGAACGTCACCTCCTACGCACA
CGGGGCGGTAATATTCAACACGGTGCACGTTGCCGCAGCTCTCACCGGTT
TGCCGCTGCGGAACCTGGTGCGAGATCGGTATGCACGGCTTCTCTGGGCA
GCCATGATCGGCGAGGGTTTAGAGCCTACGCACACGGGGCGGTAATATTC
AACACGGTGCACGTTGCCGCAGCTCTCACCGGTTTGCCGCTGCGGAACCT
GGTGCGAGATCGGTATGCACGGCTTCTCTGGGCAGCCATGATCGGCGAGG
GTTTAGAGGCGATGGCTCTGGCGGCGCGAGGCGGAGGCTGGAGGGCGGCG
AACCCTTGCTGCAGCCTCACCCTGCCGCAGCTGGAGCTACTCCTCTGCCT
GCCGTCGCCCTTGTTTGGGCTCGTGAGGCGATGGCTCTGGCGGCGCGAGG
CGGAGGCTGGAGGGCGGCGAACCCTTGCTGCAGCCTCACCCTGCCGCAGC
TGGAGCTACTCCTCTGCCTGCCGTCGCCCTTGTTTGGGCTCGTGAGTCGC
TGGTTTCTGCGGTTCCCTCCGATGTTCGCACCCGCGATGCAGGCGGATTT
GTCGGTCGGACGGGATACGAGCGTGGCGTGGACGATCGAAGAAATCGTCC
GCATAGTCGCTGGTTTCTGCGGTTCCCTCCGATGTTCGCACCCGCGATGC
AGGCGGATTTGTCGGTCGGACGGGATACGAGCGTGGCGTGGACGATCGAA
GAAATCGTCCGCATAGCGGACAAGCATAAGGGAGCGGCACCAGCTTGCCG
CGCGGTCGTCTCCGCCGTAAGACTGTGCGTCTCCCGAGGCGATGGGGTTC
CCAGCACGCCGCCACTAGAACTCCCTTTCGTCCAGGAATTGCGCCGCGGT
GGCTCGGGTAGCGCTCGAGCTTTAAACCGGAAGCGGACAAGCATAAGGGA
GCGGCACCAGCTTGCCGCGCGGTCGTCTCCGCCGTAAGACTGTGCGTCTC
CCGAGGCGATGGGGTTCCCAGCACGCCGCCACTAGAACTCCCTTTCGTCC
AGGAATTGCGCCGCGGTGGCTCGGGTAGCGCTCGAGCTTTAAACCGGAAG
GTGGTGCTGTGGGGAGGCTCGGCGACTGTCGGGGCGACGGCGCTTTACCT
GTCGGGCGGGACCTGGCTCGCCGTGGGAGGCTTATCGCTCTTCATTTTCT
TGTGCTTCGTGAAGTACGCCCTAGTAGGCGACGTGGTCCCATGAGTGGTG
CTGTGGGGAGGCTCGGCGACTGTCGGGGCGACGGCGCTTTACCTGTCGGG
CGGGACCTGGCTCGCCGTGGGAGGCTTATCGCTCTTCATTTTCTTGTGCT
TCGTGAAGTACGCCCTAGTAGGCGACGTGGTCCCATGA
back to top