prot_P-fluviatile_contig9.15064.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15064.1
Unique Nameprot_P-fluviatile_contig9.15064.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length107
Homology
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: D8LUA3_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUA3_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 1.650e-51
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0
Query:    9 MATAVAAGPLRRGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDK 102
            MATAVAA PLRRGIT+ETRSWALAMNK LEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGS+MSNKYSEGYPGARYYGGNEQIDK
Sbjct:    1 MATAVAAAPLRRGITSETRSWALAMNKPLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDK 94          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A835YWD3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD3_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.160e-38
Identity = 69/83 (83.13%), Postives = 77/83 (92.77%), Query Frame = 0
Query:   20 RGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDK 102
            R ITTETR+WA A+N+ L +TDP+LFDI+EHEK RQRDSLVLIASENFTSK+V+DALGSVMSNKYSEGYPGARYYGGNE IDK
Sbjct:   21 RAITTETRNWATALNEPLSKTDPELFDIIEHEKQRQRDSLVLIASENFTSKAVFDALGSVMSNKYSEGYPGARYYGGNENIDK 103          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A7S3M9R5_9STRA (Serine hydroxymethyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9R5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.580e-36
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
Query:   23 TTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKA 103
            T  T  WA A+NK L ETDP+L+DIME EK+RQRDSLVLIASENFTSKSV+DALGSVMSNKYSEGYPGARYYGGNEQIDKA
Sbjct:   18 TAATIEWAKALNKPLNETDPELWDIMEKEKIRQRDSLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNEQIDKA 98          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: W7TN09_9STRA (Serine hydroxymethyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN09_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.690e-36
Identity = 67/86 (77.91%), Postives = 77/86 (89.53%), Query Frame = 0
Query:   17 PLRRGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDK 102
            P+ R IT+ET+SWA ++N+ L+ TDPDL  I+E EKVRQR+SLVLIASENFTSKSV+DALGSVMSNKYSEGYPGARYYGGNE IDK
Sbjct:   21 PILRSITSETKSWATSLNEPLKTTDPDLHAIIEQEKVRQRESLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNENIDK 106          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A5D6XX90_9STRA (Serine hydroxymethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX90_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.880e-35
Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 0
Query:    9 MATAVAAGPLRRGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKA 103
            M +A+ A PLRR ITTE++ WA A+N+ LE+TDP LFDI+E EK RQRD L LIASENFTS SV DALGSVMSNKYSEGYPGARYYGGN+ ID+A
Sbjct:    1 MRSALRAQPLRRSITTESKKWAAALNERLEQTDPVLFDIIEKEKRRQRDCLSLIASENFTSVSVLDALGSVMSNKYSEGYPGARYYGGNKFIDEA 95          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A482UVT5_9ARCH (Serine hydroxymethyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVT5_9ARCH)

HSP 1 Score: 123 bits (308), Expect = 6.870e-33
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 0
Query:   29 WALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKASR 105
            WA A+NK L ETDP+L++IM+ EK RQRDSLVLIASENF S++V DALGSVMSNKYSEGYPGARYYGGNE IDKA +
Sbjct:    7 WAKALNKPLAETDPELYNIMDKEKERQRDSLVLIASENFASRAVMDALGSVMSNKYSEGYPGARYYGGNENIDKAEK 83          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: K3X783_GLOUD (Serine hydroxymethyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X783_GLOUD)

HSP 1 Score: 128 bits (322), Expect = 7.700e-33
Identity = 68/95 (71.58%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    9 MATAVAAGPLRRGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKA 103
            M  A+ A P RR ITTE++ WA A+N+ LEETDP LFDI+E EK RQR+ L LIASENFTS SV DALGSVMSNKYSEGYPG RYYGGN+ ID+A
Sbjct:    6 MRRALRALPARRSITTESKQWAAALNQRLEETDPMLFDIIEKEKQRQRNCLSLIASENFTSVSVLDALGSVMSNKYSEGYPGQRYYGGNKFIDEA 100          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A2D4BQ84_PYTIN (Serine hydroxymethyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ84_PYTIN)

HSP 1 Score: 126 bits (316), Expect = 5.840e-32
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0
Query:   20 RGITTETRSWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKA 103
            R IT+E+R WA  +NK LEETDP LFDI+E EK RQR+ + LIASENFTS SV+DALGSVMSNKYSEGYPGARYYGGN+ ID+A
Sbjct:   23 RAITSESRQWATELNKRLEETDPALFDIIEKEKQRQRNCISLIASENFTSASVFDALGSVMSNKYSEGYPGARYYGGNKFIDEA 106          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A7S2WJP7_9STRA (Serine hydroxymethyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJP7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.760e-31
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0
Query:   28 SWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDK 102
            S A  +NKSLEETDP+LF+++EHEK RQR+SLVLIASENFTSK+V+DALGSVMSNKYSEGYPGARYYGGNE ID+
Sbjct:   21 STASTLNKSLEETDPELFNLIEHEKRRQRNSLVLIASENFTSKAVFDALGSVMSNKYSEGYPGARYYGGNENIDQ 95          
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Match: A0A5A8CA14_CAFRO (Serine hydroxymethyltransferase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA14_CAFRO)

HSP 1 Score: 122 bits (306), Expect = 1.450e-30
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 0
Query:   28 SWALAMNKSLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQIDKA 103
            +W  ++N SLE TDP+LFDI+EHEK RQR SLVLIASENFTS++V+DALGSVMSNKYSEGYPG RYYGGNE ID+A
Sbjct:   28 TWVPSLNDSLENTDPELFDIIEHEKDRQRSSLVLIASENFTSRAVFDALGSVMSNKYSEGYPGQRYYGGNEWIDQA 103          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUA3_ECTSI1.650e-5195.74Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A835YWD3_9STRA5.160e-3883.13Serine hydroxymethyltransferase n=1 Tax=Tribonema ... [more]
A0A7S3M9R5_9STRA4.580e-3683.95Serine hydroxymethyltransferase n=1 Tax=Spumella e... [more]
W7TN09_9STRA9.690e-3677.91Serine hydroxymethyltransferase n=3 Tax=Monodopsid... [more]
A0A5D6XX90_9STRA5.880e-3573.68Serine hydroxymethyltransferase n=1 Tax=Pythium br... [more]
A0A482UVT5_9ARCH6.870e-3377.92Serine hydroxymethyltransferase n=1 Tax=archaeon T... [more]
K3X783_GLOUD7.700e-3371.58Serine hydroxymethyltransferase n=1 Tax=Globispora... [more]
A0A2D4BQ84_PYTIN5.840e-3275.00Serine hydroxymethyltransferase n=1 Tax=Pythium in... [more]
A0A7S2WJP7_9STRA2.760e-3181.33Serine hydroxymethyltransferase n=1 Tax=Rhizochrom... [more]
A0A5A8CA14_CAFRO1.450e-3077.63Serine hydroxymethyltransferase n=3 Tax=Cafeteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039429Serine hydroxymethyltransferase-like domainPFAMPF00464SHMTcoord: 37..103
e-value: 1.6E-28
score: 99.5
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 66..103
e-value: 1.2E-25
score: 91.8
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 41..65
e-value: 1.2E-25
score: 91.8
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 26..103
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 24..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:619567..621444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15064.1mRNA_P-fluviatile_contig9.15064.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 619567..621444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15064.1 ID=prot_P-fluviatile_contig9.15064.1|Name=mRNA_P-fluviatile_contig9.15064.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp
MLPALRRRMATAVAAGPLRRGITTETRSWALAMNKSLEETDPDLFDIMEH
EKVRQRDSLVLIASENFTSKSVYDALGSVMSNKYSEGYPGARYYGGNEQI
DKASRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039429SHMT-like_dom
IPR015421PyrdxlP-dep_Trfase_major
IPR015422PyrdxlP-dep_Trfase_dom1
IPR001085Ser_HO-MeTrfase
IPR015424PyrdxlP-dep_Trfase