mRNA_P-fluviatile_contig9.15054.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 9.740e-19 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 3
Query: 63 MRRSQYNTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMY 275
MRRS +N GRW KEEH+AFL+G L+ K+W LIA + TR+ +Q+RTHGQKY+ K+++G+ FP EPY SM+
Sbjct: 1 MRRS-FNNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMF 70
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.560e-16 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 3
Query: 81 NTGRWMKEEHEAFLRGAALYHK-DWKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMYD 278
N GRW EEH FLRG L+ + D + +A++ TRT+LQ+RTH QKY+DK+++G+ FP EPYPS YD
Sbjct: 6 NKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYD 72
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.850e-16 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 3
Query: 81 NTGRWMKEEHEAFLRGAALYHK-DWKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMYD 278
N GRW EEH FLRG L+ + D + +A++ TRT+LQ+RTH QKY+DK+++G+ FP EPYPS YD
Sbjct: 6 NKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQYD 72
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.760e-16 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 3
Query: 81 NTGRWMKEEHEAFLRGAALYHKD-WKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMYDVSPSMGPAS 305
N GRW EEH+AFLRG + ++ W IAT+ TRTVLQIRTH QKYY K+++G+ FP EPYPS ++ + AS
Sbjct: 6 NKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSAS 81
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 4.560e-15 Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 3
Query: 45 TGEPIRMRRSQYNTGRWMKEEHEAFLRGAALYHKD-WKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPRE 257
T + R+RR N GRW EEH AFLRG + ++ W IAT+ TRTVLQIRTH QKYY K+++G+ FP E
Sbjct: 2 TAQKFRIRR---NKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDE 70
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 7.520e-15 Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 3
Query: 63 MRRSQYNTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMYDVS 284
M R + N G+W +EEHEAFL G L+ + A V TR+ LQIRTH QKY+DKIERG+ FP +PYPS YD +
Sbjct: 1 MVRIRKNKGKWTREEHEAFLSG--LWQHESNSHALV-PTRSALQIRTHAQKYFDKIERGEKFPAQPYPSQYDAA 71
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A7S1C6P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.300e-12 Identity = 28/54 (51.85%), Postives = 42/54 (77.78%), Query Frame = 3
Query: 81 NTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIERGQ 242
NTGRW ++EHE F++G LY ++WK +A++ +RTV+QIRTH QKY+ K+ + Q
Sbjct: 19 NTGRWTRDEHERFVKGLELYGREWKKVASMIPSRTVVQIRTHAQKYFQKLAKEQ 72
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A836CPG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.610e-12 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 3
Query: 75 QYNTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIERGQVFPREPYPSMYDVS 284
++ TGRW EEHE FL+G ALY+K WKLIA + TRTV+Q+RTH QK++ K+ + + P+ + D S
Sbjct: 22 EFQTGRWTAEEHERFLQGLALYNKQWKLIADLIRTRTVVQVRTHAQKHFQKVAKLEAQSGRPHDTDDDXS 91
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: B7G1J8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1J8_PHATC) HSP 1 Score: 75.1 bits (183), Expect = 2.150e-12 Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 3
Query: 66 RRSQYNTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIER 236
++ + NTGRW+ EEH+ FL G A + K WKLIAT+ +RTV+Q+RTH QKY+ K++R
Sbjct: 85 KKERENTGRWLDEEHQVFLEGLAKHGKQWKLIATMIGSRTVVQVRTHAQKYFQKMDR 141
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Match: A0A835ZEA3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 6.820e-12 Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 3
Query: 84 TGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQKYYDKIER 236
TGRW EEHE FL+G ++K WKLIA + TRTV+Q+RTH QK++ K+ R
Sbjct: 1 TGRWTAEEHERFLQGLREHNKQWKLIADLIRTRTVVQVRTHAQKHFQKMAR 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15054.1 >prot_P-fluviatile_contig9.15054.1 ID=prot_P-fluviatile_contig9.15054.1|Name=mRNA_P-fluviatile_contig9.15054.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=193bp MRRSQYNTGRWMKEEHEAFLRGAALYHKDWKLIATVCTTRTVLQIRTHGQback to top mRNA from alignment at P-fluviatile_contig9:513764..517657- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15054.1 ID=mRNA_P-fluviatile_contig9.15054.1|Name=mRNA_P-fluviatile_contig9.15054.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3894bp|location=Sequence derived from alignment at P-fluviatile_contig9:513764..517657- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:513764..517657- >mRNA_P-fluviatile_contig9.15054.1 ID=mRNA_P-fluviatile_contig9.15054.1|Name=mRNA_P-fluviatile_contig9.15054.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1158bp|location=Sequence derived from alignment at P-fluviatile_contig9:513764..517657- (Porterinema fluviatile SAG_2381)back to top |