prot_P-fluviatile_contig9.15037.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15037.1
Unique Nameprot_P-fluviatile_contig9.15037.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1932
Homology
BLAST of mRNA_P-fluviatile_contig9.15037.1 vs. uniprot
Match: A0A6H5KFG5_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFG5_9PHAE)

HSP 1 Score: 1241 bits (3211), Expect = 0.000e+0
Identity = 922/1810 (50.94%), Postives = 1066/1810 (58.90%), Query Frame = 0
Query:  226 SAQTVSGNPGMTRRRHATGGPRGGSWAGSTALAAVAGGKEPDPRLLLAMAIGGSANPGGDDLFTRDAETIAEYIGLMSSDALAEET---------------SVDRCCQPGLSLTAALDKAEATAACRARMPNLLALAVAIRPLDATVTADGGIAAALGAGMSSDRLSSSSSKRKTNGDAAVLPAVDAVAATMEGESSNTETRGSKRRRVDANAIMCPYELNGKCNDDDCRYQHVKTFFPEHLATRDSPLASIGASSPNVAGPLVMASESGRTASDKGNPTSPVAPPAAAAATGSGESALEPKQQPRLPDIDFSGEREAKRQAAAAGDKGAGRVVAKHLPLSSSNNGVVSKAPDELDGAGEEDSIKGSE------GLCEETGSVNGDED------------FLALPTESEECEGGDGVSGSTEGEGSPKAVAHVAAKRTSPAVLAEAFARAASG--------DVIKGKGXXXXXXXXXXXXXXXGGDGQEERYYCGNGSGKSQGLPVAALSGHQVFVGVLLCVIRVSYLYALCVWVAAVQALGNSYLLRSISLTYFVAVALCLQLSALETQLNECESCDVEGWLLIVLHKLPRTGDSAAAVLDTVRGVARGPNGPMGGYDQAVIKPALRTFVKPLERAEGGQAEALWLLYLRLFAFLPGKTEDALGMAEYALEKFPASRRIWRLYHSMLQKSQGWSLAKEISCFNRQIEALLLLRSRAAEM-AAMQDSSPNARTSGSGSSVQGGCTGAGKAETVTSESGPASGGXXXSGCTSSGENKEDNVIGMVLYLVLERCLLLAECGYKLQAAAEMLDALGALTEGQPLWEWAAADEQGRRSVLRTPSGGG----------------ASGGGSMEEQSRVGASDEWPRHGPSSSDRYPRGVATALQDALRESRCVLWLAVLHLLIAGVFPRHALQLAENCCSNGDIARTDTDGDTHGAAELLLWSKEWLVSKSSAGFKLPVNEQLQEVILKTFMSALSDVGLLPAKNRGAQG-WAPATKDRDALLASAAEAKAARAGGLAPDPSCLEGHRLVLALNWLEFC--RGRTDEQQGRMMAIACCRRFQLARPDHPALLEHILLEHNVSKARTVDDIYGEISRAFDPEGVAAEALRERGEDTEGKAATTTAMGSRASDP---SVISSPSGDRLQAMFSFLRFVETRFESAKSKSAAAGSE---AVEVARRVLHNSLVSMWTATPSSTTNNRL--------ADSQGLLHEGQGESVRRALEGAKAALFCWADGGSGIETTTNSAGLGGRRCRDFPGRNGERQLSTIVVSLWILGGASAAIGALDHLLSAESFSSVSVERRRLAWLQRLEAAVIVSQQRR---QGTGEDIMQGAREVALRALADHRTHRR----PEYPSLTHFVAATLDRPVVADNSA--------KKVNHSPPSSFAVGTSESLSSSFSSDVLTLYADRFREVRRG-VDWVVVAEALGRNDGSEGRRLTALALLRWVSRA-----HKSAGGKGAAAGMEDLASTVQRNARPYAEEALARHPGDPGLSGAVATLAIATGSPGQAQRVLEVALRANPFCAVLWEQRIALEAEFGGGSTERAGATAAAAACSSALVRLSCGGPLGGKSPSALQARTAGRIATAISHPSSRRETKSFSLQSLLQAAGPPEGAVSPTAVA-------VPRSLFLMTGLVSLSLAFNGLHSVPVAIGRLPVLRSLDLSGNLLTALPPSLARLSGTLRILRLAGNQFGSPL-AETPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFREGAPAGVSDTLPYLEELTLPALS 1931
            SA T SG+     RR AT    G              G EPD  LLLAMAIGG   PGGDDL TRDA TIAEYI LMS + L EE+               S+ R   PGLSLT ALDKAEATAA  AR+PNLLALA AIRP+D++                                               G+    E  G+KRRRVDANAIMCP+ELNG CNDDDCRYQH+  + P        PL    +S+P  A        +  +AS  G+ TSPV  P AAAA  + E A    Q  RLP IDF+G   AKR A A   +   R V K        +      P   +G   +             G  EE  +V+  E             FLALPTE  E  GGDG      GE S    A  A ++ SPA LA+AFA AASG        +V++G G                G G+EERYY   G GK+QG   AAL   Q                                                  LSALE +LNE  SCDVEGWLL+ +H+LPR G SA AVL+T+  VA G +GPMG  DQA +K ALRTFV+PLERA+G QAE LWLLYLRLFAFLPGK++DALGMAEYALEKFP SRRIWRLYHSMLQ S GWSL +++SC+ RQIEALLLL+ RAA+M A+ QD S                                   XXX           +  + M++YLVLERC LLAE GYKLQAAAE+LD+LGAL EGQPLW W A D QGRR++LRT  GGG                A+ GGS E      ASD+       +  R P GVA AL+ A R+SRCVLWL  LHLL+ GVFPRHAL LAEN    G     DT       A LLLW  EWL  KSSA  +L  +  LQ+  LKTFM+ALSDVGLLP     +QG WAPA KDRDALL+SAAEAKAARAGG+APD S LEG  LVLALNWL FC  RGR D +QGRMMA ACCRRFQL+RPD PALLEH LLEH VSK RT+ D Y EISRAFD +GVAA ALRER  D EGK+A+    G+R  D    +++  PSG+R+QA+++FLRFVE+R E+A+S+S +A      A+E ARRVL ++LV MWT   S               ++S   L E  GESVR+ALEGAKA+LF WADGGSG              C D PG NGERQLSTIV SLW+LGGASAAIG+LDH+LSAESFS VS ER+RLAWLQRLEAA+I+S Q+R   Q +G D MQG REVALRALADHRT RR     EYPSL HFVAATLDRP   ++          K ++  PP +     S + SSSF+ DVLT+YA+ FRE +RG VDWVV AEALG    +                      H  +G   AA+ + D AS ++ NARPY E ALA +P D  L GAVA L  ATGSP  AQRVLE ALRA+P+CA LWEQR+ALEA FG GSTERAGATAAAAA S  ++RL CGG LGG++PS LQARTAGRIATAISHP+SRRE KSFSLQ+ L+A   P G+ +P A A       VPRS+FLMT L SLSLAFNGL S                             RLSGTLR+LR AGN+  SPL A T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F E APAG+SD LP+LEELTLPAL+
Sbjct:   18 SAPTKSGSGVSVPRRLATSPRTGXXXXXXXXXXXXTDGCEPDSNLLLAMAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFEMLGEESQGRDRPVERWHQVGASIRRRLVPGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXGDEPRAEAPGAKRRRVDANAIMCPFELNGVCNDDDCRYQHLDVYLP--------PLNPGTSSAPISASAAANVQPAKSSASGPGS-TSPVPGPLAAAAARTDERASALGQH-RLPAIDFTGA--AKRDAVARARENGRRGVVKPSSSRQPTSETGGVTPTAAEGGTADQXXXXXXXXXXXXGELEEADAVDSGEXXXXXXXXXXXXXFLALPTERAENNGGDG------GEASSGTAA--APEQASPAALAKAFALAASGALASGGRGNVVRGAGGS--------------GVGREERYYLEGGDGKTQGAASAALPDDQ--------------------------------------------------LSALEAKLNEGASCDVEGWLLLAMHQLPRAGGSAKAVLNTISDVACGASGPMGSVDQAAVKSALRTFVRPLERADGAQAEVLWLLYLRLFAFLPGKSDDALGMAEYALEKFPTSRRIWRLYHSMLQTSPGWSLPEDVSCYRRQIEALLLLQPRAADMRASPQDGSXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXAEAEVKMIVYLVLERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRTFEGGGHEREGEGNGATRXXGGANAGGSTE------ASDD-------NGQRLPAGVAAALKHAPRDSRCVLWLTALHLLVMGVFPRHALTLAEND-GGGLGGSNDTTAAGGDLAALLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPR--SQGCWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCLRRGRVDARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVSKTRTLGDTYHEISRAFDADGVAAGALRER-RDGEGKSASLNPAGARRRDEQSVNLVPPPSGERIQAVYAFLRFVESRLEAARSESESANDADRGALEDARRVLRDALVGMWTGVSSXXXXXXXXXXXXXARSESYRWLEEEGGESVRQALEGAKASLFRWADGGSG-------------GC-DAPGGNGERQLSTIVFSLWVLGGASAAIGSLDHILSAESFSGVSAERKRLAWLQRLEAAIILSTQQRRKQQASGVDAMQGVREVALRALADHRTERRCVLPAEYPSLAHFVAATLDRPPATESPVRDSGGQPGKSISRDPPFASLATDSSASSSSFACDVLTVYANHFREAKRGGVDWVVAAEALGGVSAAXXXXXXXXXXXXXXXXXXXXXDHDESGAATAASSV-DGASALKANARPYVEMALAMNPADTALCGAVAALWAATGSPDLAQRVLEAALRAHPYCAELWEQRVALEAGFGSGSTERAGATAAAAAGSRVMLRLRCGGKLGGQTPSGLQARTAGRIATAISHPTSRREIKSFSLQAALRA---PPGSSAPVAAAGAMATIEVPRSIFLMTSLTSLSLAFNGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSGTLRLLRAAGNRLQSPLSATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFSERAPAGLSDALPFLEELTLPALA 1698          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFG5_9PHAE0.000e+050.94C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 1791..1905
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 729..751
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..697
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 752..1931
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 698..722
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 723..728
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1792..1928
NoneNo IPR availableTMHMMTMhelixcoord: 700..722
NoneNo IPR availableTMHMMTMhelixcoord: 729..751
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 1821..1844
e-value: 0.016
score: 24.4
coord: 1798..1820
e-value: 96.0
score: 5.2
coord: 1894..1917
e-value: 160.0
score: 3.4
coord: 1870..1893
e-value: 5.4
score: 15.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 1847..1906
e-value: 2.1E-6
score: 27.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1823..1845
score: 7.057
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1800..1821
score: 5.078
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1872..1893
score: 6.31
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1786..1930
e-value: 6.9E-25
score: 89.2
IPR019607Putative zinc-finger domainPFAMPF10650zf-C3H1coord: 425..445
e-value: 3.9E-10
score: 39.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 420..446
score: 9.817

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:316636..326514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15037.1mRNA_P-fluviatile_contig9.15037.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 316150..326540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15037.1 ID=prot_P-fluviatile_contig9.15037.1|Name=mRNA_P-fluviatile_contig9.15037.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1932bp
MAQPWHGGRGSSRGRGTFARSGRGSRRVDHRANVWTPASAAPSALAAPAR
QASAVAAPPAPPALPPALKARTSARKAADLVQAVSERSAAEIETHLQEVE
DRLAAVVAQEEEVRVMADEHLEREAYLTKLLEGLYRKQKEEQDGTSPPAD
LELLSHSASPCTEKVFAVSTGETEPNAAAPVASAPASISSLTPSLPAAVA
AVTVDPTAQNAVAQVAAAEAAVSAPSAQTVSGNPGMTRRRHATGGPRGGS
WAGSTALAAVAGGKEPDPRLLLAMAIGGSANPGGDDLFTRDAETIAEYIG
LMSSDALAEETSVDRCCQPGLSLTAALDKAEATAACRARMPNLLALAVAI
RPLDATVTADGGIAAALGAGMSSDRLSSSSSKRKTNGDAAVLPAVDAVAA
TMEGESSNTETRGSKRRRVDANAIMCPYELNGKCNDDDCRYQHVKTFFPE
HLATRDSPLASIGASSPNVAGPLVMASESGRTASDKGNPTSPVAPPAAAA
ATGSGESALEPKQQPRLPDIDFSGEREAKRQAAAAGDKGAGRVVAKHLPL
SSSNNGVVSKAPDELDGAGEEDSIKGSEGLCEETGSVNGDEDFLALPTES
EECEGGDGVSGSTEGEGSPKAVAHVAAKRTSPAVLAEAFARAASGDVIKG
KGGRGASGAGARSARSNGGDGQEERYYCGNGSGKSQGLPVAALSGHQVFV
GVLLCVIRVSYLYALCVWVAAVQALGNSYLLRSISLTYFVAVALCLQLSA
LETQLNECESCDVEGWLLIVLHKLPRTGDSAAAVLDTVRGVARGPNGPMG
GYDQAVIKPALRTFVKPLERAEGGQAEALWLLYLRLFAFLPGKTEDALGM
AEYALEKFPASRRIWRLYHSMLQKSQGWSLAKEISCFNRQIEALLLLRSR
AAEMAAMQDSSPNARTSGSGSSVQGGCTGAGKAETVTSESGPASGGGGGS
GCTSSGENKEDNVIGMVLYLVLERCLLLAECGYKLQAAAEMLDALGALTE
GQPLWEWAAADEQGRRSVLRTPSGGGASGGGSMEEQSRVGASDEWPRHGP
SSSDRYPRGVATALQDALRESRCVLWLAVLHLLIAGVFPRHALQLAENCC
SNGDIARTDTDGDTHGAAELLLWSKEWLVSKSSAGFKLPVNEQLQEVILK
TFMSALSDVGLLPAKNRGAQGWAPATKDRDALLASAAEAKAARAGGLAPD
PSCLEGHRLVLALNWLEFCRGRTDEQQGRMMAIACCRRFQLARPDHPALL
EHILLEHNVSKARTVDDIYGEISRAFDPEGVAAEALRERGEDTEGKAATT
TAMGSRASDPSVISSPSGDRLQAMFSFLRFVETRFESAKSKSAAAGSEAV
EVARRVLHNSLVSMWTATPSSTTNNRLADSQGLLHEGQGESVRRALEGAK
AALFCWADGGSGIETTTNSAGLGGRRCRDFPGRNGERQLSTIVVSLWILG
GASAAIGALDHLLSAESFSSVSVERRRLAWLQRLEAAVIVSQQRRQGTGE
DIMQGAREVALRALADHRTHRRPEYPSLTHFVAATLDRPVVADNSAKKVN
HSPPSSFAVGTSESLSSSFSSDVLTLYADRFREVRRGVDWVVVAEALGRN
DGSEGRRLTALALLRWVSRAHKSAGGKGAAAGMEDLASTVQRNARPYAEE
ALARHPGDPGLSGAVATLAIATGSPGQAQRVLEVALRANPFCAVLWEQRI
ALEAEFGGGSTERAGATAAAAACSSALVRLSCGGPLGGKSPSALQARTAG
RIATAISHPSSRRETKSFSLQSLLQAAGPPEGAVSPTAVAVPRSLFLMTG
LVSLSLAFNGLHSVPVAIGRLPVLRSLDLSGNLLTALPPSLARLSGTLRI
LRLAGNQFGSPLAETPIGDLASLRVLDLEYNELSQFPQAVVIRLRELRTL
KLAGNAFREGAPAGVSDTLPYLEELTLPALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR019607Putative_zinc-finger_domain
IPR000571Znf_CCCH