prot_P-fluviatile_contig9.15026.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15026.1
Unique Nameprot_P-fluviatile_contig9.15026.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length271
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig9.15026.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.920e-19
Identity = 50/74 (67.57%), Postives = 62/74 (83.78%), Query Frame = 0 
Query:    3 FVQSMIVIFAGGKSGLSAAVTGIMLIITAVLRPLLPVIASGHVSAALTVVTSLRFLTVIRMVDVTRPSNLLLFG 76
            FVQSMI++FAGGK+GLSA VTG +L++T V+ PLLP++A  HVS ALTVV SLRF TVI+M+DV  P NLL+FG
Sbjct:  298 FVQSMILVFAGGKTGLSAVVTGALLLMTTVMWPLLPLLAPAHVSGALTVVISLRFFTVIKMIDVNEPRNLLMFG 371
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2T1_ECTSI2.920e-1967.57Putative transporter n=1 Tax=Ectocarpus siliculosu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availableTMHMMTMhelixcoord: 39..58
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:240385..242419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15026.1mRNA_P-fluviatile_contig9.15026.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 240382..243220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15026.1 ID=prot_P-fluviatile_contig9.15026.1|Name=mRNA_P-fluviatile_contig9.15026.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=271bp
MTFVQSMIVIFAGGKSGLSAAVTGIMLIITAVLRPLLPVIASGHVSAALT
VVTSLRFLTVIRMVDVTRPSNLLLFGIPLVLVPFSSDFMDPLCIATVLAF
LCELGDVYLWSSRNFRSSNGKVAVSDDNGHGVQPECEAGELSGKDITATT
QLSGSSRLTHKVTPSFSAPATPFRERRARRNTENDLFRLTNSFRRNIRWS
VELTAGQGSVATSSTWNLPEQGGAHQRSSSYSLGTTPTVRPASLPLGLAL
AAALQLVFSAMKSRSQDGNY*
back to top