prot_P-fluviatile_contig9.15025.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig9.15025.1
Unique Name	prot_P-fluviatile_contig9.15025.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	120

Homology

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BLAST of mRNA_P-fluviatile_contig9.15025.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 2.460e-27
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0

Query:    1 MVGLAVIVAACGTAADGKLKTKWLLVLGVPTMVTAIIYAVQFPSKFDGFSSAEHAPLTNWSGASFGLVDSEELWRAISHHWFYVVRISFSVVISVSSVLLVCIDAVCLEKIHAQLKSS 118
            +VG  +I AACG AA  K   KW+ VLGVP ++T  IYAV   SKF G+S A+H PL+NW   +FG ++  EL      +WFY+ R   SV I+VSS+LL+ IDAVCLE +  ++KS+
Sbjct:  141 IVGFGIITAACGKAAPEKQLKKWMHVLGVPMVITVAIYAVLDRSKFQGYSLADHPPLSNWGMGAFGTINFSELRETPRKYWFYISRTFLSVNINVSSILLILIDAVCLEDVRTKVKST 258

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig9.15025.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig9.15025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G2T1_ECTSI	2.460e-27	49.15	Putative transporter n=1 Tax=Ectocarpus siliculosu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..80
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..120
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 81..108
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 23..41
None	No IPR available	TMHMM	TMhelix		coord: 23..42
None	No IPR available	TMHMM	TMhelix		coord: 81..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig9	contig	P-fluviatile_contig9:238809..239385 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig9.15025.1	mRNA_P-fluviatile_contig9.15025.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig9 238805..239385 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig9.15025.1 ID=prot_P-fluviatile_contig9.15025.1|Name=mRNA_P-fluviatile_contig9.15025.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp
MVGLAVIVAACGTAADGKLKTKWLLVLGVPTMVTAIIYAVQFPSKFDGFS
SAEHAPLTNWSGASFGLVDSEELWRAISHHWFYVVRISFSVVISVSSVLL
VCIDAVCLEKIHAQLKSSAG