prot_P-fluviatile_contig9.15163.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15163.1
Unique Nameprot_P-fluviatile_contig9.15163.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length111
Homology
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BLAST of mRNA_P-fluviatile_contig9.15163.1 vs. uniprot
Match: A0A6H5KUK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.110e-8
Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    1 MARARPLESSSFLVVLGTLLAHRGGIDAVTPFQTHKHVQQRQYRAGGRWVHRR 53
            MAR RP E+S+F++VLG+LLA RGGI+AV PFQ+ +HVQ  + R G  W +RR
Sbjct:    4 MARPRPWETSTFVLVLGSLLAGRGGIEAVAPFQS-RHVQHTR-RGGAGWAYRR 54
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUK4_9PHAE4.110e-858.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:1539305..1539637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15163.1mRNA_P-fluviatile_contig9.15163.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 1539264..1539637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15163.1 ID=prot_P-fluviatile_contig9.15163.1|Name=mRNA_P-fluviatile_contig9.15163.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=111bp
MARARPLESSSFLVVLGTLLAHRGGIDAVTPFQTHKHVQQRQYRAGGRWV
HRREAAIGAGGITAALEPSGRGLAERTRTELSQGAVRQSSGVRIAAALRG
GRSMRNSKLDN
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