prot_P-fluviatile_contig89.14990.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14990.1
Unique Nameprot_P-fluviatile_contig89.14990.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length619
Homology
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A6B7EVT1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVT1_9PHAE)

HSP 1 Score: 1185 bits (3065), Expect = 0.000e+0
Identity = 580/618 (93.85%), Postives = 605/618 (97.90%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618
            MKN KQKFDYVKINLASPERI+EWAEK+LPNGE +GEVTEPETINYRTHKPEKGGLFCEKIFGP+KNWEC+CGLHK+KKKDV+FCE+CGVE+TESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLS+MLASPINELEAVIYNGKEPDQDEDV+KYE++FLSSFYDTE EGFHYGKKRQGAEILY RLK +DLK+EIE+NRNIMFFETAKKKVEAAIKKIRIFENFL T TRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP+VVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPF+IYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCS+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTT+NRKNL GSNNYFANF EVISAY+QKQLQ+HS+IWVRCPNDINLD+PLKFIKKI LS TT L+IYNNLQRKETI GELLVQYLRTTPGRIIFNQCVNDILNKSEVK
Sbjct:    1 MKNLKQKFDYVKINLASPERIQEWAEKVLPNGERVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECSCGLHKFKKKDVFFCEVCGVEVTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPINELEAVIYNGKEPDQDEDVAKYEEVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKNLDLKVEIEKNRNIMFFETAKKKVEAAIKKIRIFENFLTTNTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTRNRKNLRGSNNYFANFNEVISAYKQKQLQLHSAIWVRCPNDINLDNPLKFIKKINLSKTTQLVIYNNLQRKETIDGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: D1J788_ECTSI (DNA-directed RNA polymerase subunit beta' n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J788_ECTSI)

HSP 1 Score: 1150 bits (2974), Expect = 0.000e+0
Identity = 561/618 (90.78%), Postives = 594/618 (96.12%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618
            MKN KQKFDYVKINLASPERI+EWAEK LPNGE++GEVT+PETINYRTHKPEKGGLFCEKIFGP+KNWECTCGLHKYK+K+V+FCE+CGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLS+MLASPI++LEAVIYNGK+PDQDED++KYEQ+FLSSFYDTE EGFHYGKKRQGAEILY RLKKIDLK EIE NRN+MFF   KKKVE AIKKIRIFENFL TGTRPEWMVL+F+PVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP+VV+ TEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP LKLNQCGLPYEMAIELFLPF+IYRLLSQGLSHSIKRAKKIIY NEPFIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGR+IQLHPLVCS+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS SSGEPTIQPSQDMVLGFYYLTTQNR NL GSNNYF++F EVISAY+QKQ+QIHSSIWVRCPN+INLDSPLKFIKKI LSN   L IYNNLQRKET+ GELLVQ+LRTTPGRIIFNQCVNDILNKSEVK
Sbjct:    1 MKNLKQKFDYVKINLASPERIKEWAEKTLPNGEIVGEVTQPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGLHKYKEKNVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPISKLEAVIYNGKKPDQDEDLAKYEQVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKKIDLKTEIEINRNVMFFSEVKKKVEVAIKKIRIFENFLTTGTRPEWMVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVISAYQQKQVQIHSSIWVRCPNEINLDSPLKFIKKINLSNNNTLTIYNNLQRKETMGGELLVQFLRTTPGRIIFNQCVNDILNKSEVK 618          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A0R6MFT6_UNDPI (DNA-directed RNA polymerase subunit beta' n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6MFT6_UNDPI)

HSP 1 Score: 1058 bits (2735), Expect = 0.000e+0
Identity = 520/614 (84.69%), Postives = 560/614 (91.21%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILNK 614
            MKN KQ+F+YVKINLASPERI+EWAEKILPNGE++GEVTEPETINYRTHKPEKGGLFCEKIFGP+KN ECTCG +K+K+ D   CEICGVELTESRVRRHRMGYI LLSPVVHIWYLKGSPS LS++L S I +LE V+YNGKEP+QD+DVSKY+  F    YDTE EGF YGKKRQGAEILYDRLK+IDLK+EI  NRNIMF     K VE AIK+IRIFENFL T TRPEWMVL+FLPVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP+VVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+IY+LLSQGLSHSIK+AKKIIY N+ FIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR  L GSNNYF+NF EVI+AYEQKQLQ+HSSIWVRCP DI LD+ LKF+K I L N   L IYNNLQRKET  G+LLVQY+RTTPGRIIFNQC+N+ILNK
Sbjct:    1 MKNMKQQFEYVKINLASPERIKEWAEKILPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNCECTCGRYKHKEPDTLICEICGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSFLSTILDSSITKLEGVVYNGKEPEQDQDVSKYDDFF----YDTEGEGFVYGKKRQGAEILYDRLKRIDLKVEIASNRNIMFCSNVTKAVEDAIKRIRIFENFLTTNTRPEWMVLHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFIIYKLLSQGLSHSIKKAKKIIYSNQSFIWYLTEEILRKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMGLKGSNNYFSNFNEVITAYEQKQLQLHSSIWVRCPKDITLDTELKFLKTIVLDNLQTLHIYNNLQRKETKDGQLLVQYIRTTPGRIIFNQCINNILNK 610          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A8F0F9J3_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J3_9PHAE)

HSP 1 Score: 1041 bits (2691), Expect = 0.000e+0
Identity = 513/614 (83.55%), Postives = 553/614 (90.07%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILNK 614
            MKN KQ+F+YVKINLASP+ I+EWAEK LPNGE++GEVTEPETINYRTHKPEKGGLFCEKIFGP+KNWECTCG +K +   +  CE CGVELTESRVRRHRMGYI LLSPVVHIWYLKGSPSLLS++L S I  LE+VIYNGKEP QD+D+SKY   F    YD  +EGF + KK QGAEILYD LKKI+LK EIE NRNIM    A KK+E AIK++RIFENFL T TRPEW +L+FLPVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFLIY+LLSQ LSHSIKRAKKIIY N PFIW+LTEEIL+KHPIILNRAPTLHRLGVQAFDP+L+RGRAIQLHPLVC+AFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR  L G+NNYF++F EVISAYEQKQLQ+HSSIWVRCP DI LD  LKF+K I LSN  NL IYNNLQRKET TGELLVQY+RTTPGRIIFN+CVNDILNK
Sbjct:    1 MKNMKQQFEYVKINLASPDCIKEWAEKTLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGRYKQRDLSIVVCETCGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSLLSAILYSSITRLESVIYNGKEPGQDQDISKYTDFF----YDAMDEGFVFSKKSQGAEILYDSLKKINLKEEIEDNRNIMLCSKAVKKIEDAIKRVRIFENFLTTNTRPEWTILHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLIYKLLSQELSHSIKRAKKIIYSNRPFIWHLTEEILRKHPIILNRAPTLHRLGVQAFDPILVRGRAIQLHPLVCAAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMQLKGANNYFSDFNEVISAYEQKQLQVHSSIWVRCPTDITLDIQLKFLKTIVLSNNENLHIYNNLQRKETKTGELLVQYIRTTPGRIIFNECVNDILNK 610          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: D1GJH3_FUCVE (DNA-directed RNA polymerase subunit beta' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH3_FUCVE)

HSP 1 Score: 1005 bits (2598), Expect = 0.000e+0
Identity = 488/615 (79.35%), Postives = 550/615 (89.43%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRC--PNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILN 613
            MKN K++F+Y++INLASP+RI+EW+EKILP GE+IGEVTEPETINYRTHKPEKGGLFCEKIFGP+KNWEC CG +K+K +++  CEICGVELTESRVRRHRMGYIKLL+PVVHIWYLKGSPS LS +L S I+++EA++Y+GKEP+++ ++ KYE  F    Y+ +  GF YGKK QG EILYD+LK+IDLK+EIE NRNIMF     K VEAAIK+IRIFENFL T TRPEWM+L FLPVLPPGIRP+V+LDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP++VI TEKRMIQE+VDTLIDNGKRGSK++D N+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L LNQCGLPYEMAIELFLPF+IYRLLSQGL HSIK+AKKIIY N+ FIWYLT+EIL KHPIILNRAPTLHRLGVQAFDP+L+ GRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR  L G+NNYF+NF EV+SAY+QKQLQIHS+IWVRC   N I LD+ LKF K I L N  N+ +YNNLQRKET  G+LLVQY+RTTPGRIIFNQC+NDILN
Sbjct:    1 MKNVKEQFEYLRINLASPKRIKEWSEKILPTGEIIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHKDEEIAICEICGVELTESRVRRHRMGYIKLLTPVVHIWYLKGSPSFLSIVLDSSISQIEAIVYSGKEPEKEHNILKYEDFF----YENQGPGFVYGKKPQGTEILYDKLKRIDLKVEIEINRNIMFCSNVTKVVEAAIKRIRIFENFLTTNTRPEWMILNFLPVLPPGIRPMVQLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIMTEKRMIQESVDTLIDNGKRGSKVVDTNRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPELHLNQCGLPYEMAIELFLPFIIYRLLSQGLCHSIKKAKKIIYSNQSFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPILVNGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRIGLKGTNNYFSNFHEVLSAYQQKQLQIHSTIWVRCFNSNQIFLDNELKFCKTIALGNDINIHVYNNLQRKETSQGKLLVQYIRTTPGRIIFNQCLNDILN 611          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A141BSD2_9PHAE (DNA-directed RNA polymerase subunit beta' n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD2_9PHAE)

HSP 1 Score: 994 bits (2570), Expect = 0.000e+0
Identity = 482/615 (78.37%), Postives = 550/615 (89.43%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENE--GFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILN 613
            MK  +++F+Y++INLASP+RI+EW++K LP GE+IGEVTEPETINYRTHKPEKGGLFCEKIFGP+KNWEC CG +K++  ++  CE CGVELTESRVRRHRMGYIKLL+PVVHIWYLKG+PS L+S+L SPI+ +E +IY+GKEP+QD++V KYE  F       EN+  GF +GKK QGAEILYD+LK IDLK+EIE NRNIMF  T  K VEAAIK+IRIFENFL T TRPEWM+L FLPVLPPGIRP+VKL+NGRFATSDLNELYRKIIIRNKRLKRLLSVHAP++VI TEKRMIQE+VDTLIDNGKRGSK++DAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L+LNQCGLPYEMAIELFLPF+IY+LLSQGL HSIK+AKKII+ N+PFIWYLT+EIL KHPIILNRAPTLHRLGVQAFDPVL++GRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSP++GEP IQPSQDM+LGFYYLTT NR  L G+NNYF++F EV+SAY+ KQL++HS IWVRC N++ LDS LKFIK I  +N   L IYNNLQRKET  G+ LVQY+RTTPGRIIFNQC+NDILN
Sbjct:    1 MKTIEEQFEYIRINLASPQRIKEWSQKTLPTGEVIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHRDDEISICETCGVELTESRVRRHRMGYIKLLTPVVHIWYLKGAPSFLASILDSPISRIETIIYSGKEPEQDQEVLKYEDFF------PENQLPGFVFGKKPQGAEILYDKLKNIDLKIEIETNRNIMFCSTVTKVVEAAIKRIRIFENFLSTNTRPEWMILQFLPVLPPGIRPMVKLENGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIITEKRMIQESVDTLIDNGKRGSKVVDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPKLQLNQCGLPYEMAIELFLPFIIYKLLSQGLCHSIKKAKKIIHSNQPFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPVLVKGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPATGEPNIQPSQDMILGFYYLTTHNRLGLKGANNYFSSFHEVLSAYQHKQLKVHSPIWVRCSNELLLDSKLKFIKTIN-NNNNKLHIYNNLQRKETSEGKFLVQYIRTTPGRIIFNQCLNDILN 608          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A8F0JZT2_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT2_9PHAE)

HSP 1 Score: 992 bits (2564), Expect = 0.000e+0
Identity = 485/614 (78.99%), Postives = 544/614 (88.60%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILNK 614
            MK  KQ+F+YVKINLASPERI+EW EK LPNG+++GEV EPETINYRTHKPEK GLFCEKIFGP+KNWECTCG +K+K++D   CE+CGVE+TESRVRRHRMGYIKLL+PV+HIWYLKGSPS LS++LAS +  +E ++Y G++P+       YE  F +      +EGF YGKK +G EILYDRLKKI+LK EIE NRNIMF   A K VE AIK+IRI+ENFL T TRPEWM+L FLPVLPPG+RP+VKLD+GRFATSDLNELYRKII+RNKRL RLLSVHAPN+VI+TEKRMIQEAVDTLIDNGKRGSK+LDAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFLI++LL QGL++SIKRAKKIIY N  FIWYLTEE LKKHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQP+QDMVLGFYYLT  NR  L G+NNYF+NF EV+ AYEQKQLQ+HSS+WVR PN+I LD+PL ++K ITL +  NL IYNNLQRKET+ G+LLVQYLRTTPGRIIFNQCVNDILNK
Sbjct:    1 MKKVKQEFEYVKINLASPERIKEWGEKTLPNGKIVGEVIEPETINYRTHKPEKDGLFCEKIFGPVKNWECTCGRYKHKEEDTLICEVCGVEVTESRVRRHRMGYIKLLAPVLHIWYLKGSPSYLSAILASSVTNIEGLVY-GRDPE----FFDYEDFFFN------DEGFVYGKKLEGTEILYDRLKKINLKTEIESNRNIMFCSNATKVVEDAIKRIRIYENFLTTNTRPEWMILNFLPVLPPGLRPMVKLDSGRFATSDLNELYRKIILRNKRLGRLLSVHAPNIVITTEKRMIQEAVDTLIDNGKRGSKVLDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLQLNQCGLPYEMAIELFLPFLIHKLLFQGLANSIKRAKKIIYSNRSFIWYLTEETLKKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPTQDMVLGFYYLTANNRMQLKGANNYFSNFNEVVIAYEQKQLQLHSSVWVRLPNNITLDTPLTYLKTITLKSNENLHIYNNLQRKETMDGKLLVQYLRTTPGRIIFNQCVNDILNK 603          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A8F0JYE1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE1_9PHAE)

HSP 1 Score: 899 bits (2323), Expect = 0.000e+0
Identity = 448/611 (73.32%), Postives = 509/611 (83.31%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDI 611
            M   KQ F  VKINLASPERI+ W+EK LP+GE+IGEV E ETINYRTHKPEKGGLFCEKIFGP+KNWEC CG +K K K+   CE+C VE+ +SRVRRHRMGYI LL+PVVH+WYLKGSPS LS++L SP+  +E V+Y GK    D   S+YEQ   +       E F   K+ +GAEI+YD+L+KIDLK EIE NR IMF     K  E AIK+IR+FENFL T T+PEWMVL  LPVLPPGIRP++++ NGRFATSDLNELYRKIIIRN RL RL+SVHAPN++I TEKRMIQE+VD LIDNGKRG K+LD++KRPLKSLADIIEGKQGRFR NLLGKR DYSGRSVIIVGPQL LNQCGLPYEMAIELFLPF+I++LL QGL +SIK+AKKII+ N+ FIW+L +EIL +HPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQLETRLCLLA NNFLSP++GE  I PSQDMVLGFYYLTTQNR  L G+NNYF+NF EVISAY+QKQL +HSSIWVRC ++I+L + LKF K I L N   L IYNNLQRKET  G+ LVQYLRTTPGRI+FNQCVNDI
Sbjct:    1 MNKNKQDFVSVKINLASPERIKAWSEKELPSGEIIGEVLESETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKQKTKNDLICEVCSVEVIDSRVRRHRMGYISLLTPVVHVWYLKGSPSFLSAILESPVKTIEQVVY-GKTFGLD--FSRYEQFLFTE------EDFATEKRLEGAEIIYDQLQKIDLKTEIEMNREIMFCSNNVKSTEDAIKRIRLFENFLTTNTKPEWMVLNCLPVLPPGIRPMIQMANGRFATSDLNELYRKIIIRNNRLGRLISVHAPNMIIKTEKRMIQESVDALIDNGKRGEKVLDSHKRPLKSLADIIEGKQGRFRLNLLGKRTDYSGRSVIIVGPQLALNQCGLPYEMAIELFLPFIIHKLLFQGLVYSIKKAKKIIFSNDSFIWFLLKEILIQHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLATNNFLSPATGEANIHPSQDMVLGFYYLTTQNRMKLKGANNYFSNFNEVISAYQQKQLHVHSSIWVRCSDNIDLYTQLKFFKTIELQNGNRLHIYNNLQRKETKNGDFLVQYLRTTPGRILFNQCVNDI 602          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A8E6D698_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D698_9PHAE)

HSP 1 Score: 856 bits (2211), Expect = 1.690e-307
Identity = 430/621 (69.24%), Postives = 505/621 (81.32%), Query Frame = 0
Query:    1 MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDEDVSKYEQLFLSSFYDTENEG---------FHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDIL 612
            +K  K++F+YVKINLASPE+IR W EK LP GE++GEVTE ETINYRT+KPEKGGLFCEKIFGPIKNWEC CG +     D   CE CGVE+TES+VRRHRMGYI+LL PV HIWYLKGSPS LS +L   +  LE +IY GK+            L    F D ENE          F  G + +G   LY+RLKKI+L+ EIE++R IM    + K  E AIK+IRI ENFL T T+PEWM+LYFLPV+PPG+RPI+KL+NGRFA+SDLNELYR+IIIRNKRL RL+SVHAP+VV++TE RMIQE++DTLIDNGKRG+ ++D++KRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFL+++L+ QGL++SI +AKKIIY N+ FIW L +EIL +HP+ILNRAPTLHRLGVQAFD +L+ GRAIQLHPLVC AFNADFDGDQMAVHIPLSFESQ+ETRLCLLAPNNFLSP++G+P IQP+QDMVLGFYYLT QN  NL GSN+YF +F+EVI AY QKQL IHSSIWVRCP +I LD  L   K +TL ++  + IY +LQRKET  G LLVQYLRTTPGR+IFNQ VN++L
Sbjct:    3 IKKMKRQFEYVKINLASPEQIRGWGEKYLPTGEVVGEVTESETINYRTYKPEKGGLFCEKIFGPIKNWECGCGQYTQSFDDGIICENCGVEVTESKVRRHRMGYIRLLVPVAHIWYLKGSPSFLSIVLKQSVKTLEEMIY-GKD------------LKEEGFLDEENEEDEEIINKKHFFSGNQLEGINSLYNRLKKINLRDEIEKSREIMLCAKSAKPFEDAIKRIRILENFLSTNTKPEWMLLYFLPVIPPGLRPIIKLENGRFASSDLNELYRRIIIRNKRLGRLMSVHAPSVVLNTETRMIQESIDTLIDNGKRGATVVDSHKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLMHKLIYQGLANSINKAKKIIYNNKSFIWGLLKEILGRHPVILNRAPTLHRLGVQAFDAILVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQIETRLCLLAPNNFLSPATGDPVIQPTQDMVLGFYYLTAQNHTNLKGSNHYFGSFEEVILAYSQKQLHIHSSIWVRCPVNIELDIKLDLPKIVTLKDS-RIKIYKDLQRKETHKGHLLVQYLRTTPGRVIFNQEVNNLL 609          
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Match: A0A2I4Q2A7_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A7_9PHAE)

HSP 1 Score: 833 bits (2152), Expect = 1.260e-298
Identity = 415/611 (67.92%), Postives = 491/611 (80.36%), Query Frame = 0
Query:    5 KQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHKPEKGGLFCEKIFGPIKNWECTCGLHKYKKKDV-YFCEICGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQD-EDVSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRNIMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRCPNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPGRIIFNQCVNDILN 613
            +Q++  ++INLAS ERI++W+E  LPNGE++GE+TE +TINYRTHKPE+ GLFC+KIFGPIK+WEC CGL+K +       CE+CGV +TESRVRRHRMGYI LL PVVHIWYL+G P+ LS +L +P+ +LE  IY GK   +D  +  ++E+  L      E E      + QGAEI+Y +LK++DLK EI+ NR IM    + K VE AIK++RIFENFL T T+PEWM+   LPVLPPG+RPIV+LDNGR ATSDLNE YRKI+IR +RL RLLSV AP+++I TEKRMIQE+VD LIDNGKRG K+LD +KRPLKSLA++IEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL LNQCGLPYEMA+ELFLPFLI+++    L+ SIK AKKIIY N+ FIWYL +EIL KHPIILNRAPTLHRLGVQAFDPVL+ GRAIQLHPLVC AFNADFDGDQMAVHIPLS ESQLETRLCLLA NNFLSP++GEP I PSQDMVLGFYYLTTQNR  L G+NNYF+ F EVISAY+QK+L +HSSIWVRCP  + L+  L  +K   L N   L IY N Q+KET  G+ L QYLRTTPGRIIFN+ +N+ILN
Sbjct:    2 RQEYQCIQINLASSERIKKWSEITLPNGEIVGEITESDTINYRTHKPERNGLFCQKIFGPIKDWECICGLYKNEVTQAGLICEVCGVAITESRVRRHRMGYINLLHPVVHIWYLRGIPNFLSIILKAPLKKLEETIY-GKNLSRDLTNYEEFEEFIL------EGELLSAQNQLQGAEIIYKKLKRLDLKEEIKNNRLIMVSSKSTKAVEDAIKRVRIFENFLATKTKPEWMIFNVLPVLPPGLRPIVQLDNGRLATSDLNEFYRKILIRTQRLGRLLSVQAPSMIIFTEKRMIQESVDALIDNGKRGPKVLDIHKRPLKSLAEMIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLHLNQCGLPYEMAVELFLPFLIHKIFFLKLAGSIKTAKKIIYSNKSFIWYLLKEILNKHPIILNRAPTLHRLGVQAFDPVLVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSLESQLETRLCLLATNNFLSPATGEPNILPSQDMVLGFYYLTTQNRIKLKGNNNYFSTFNEVISAYQQKKLHLHSSIWVRCPKTVKLEMELVLLKIHILPNKDKLYIYQNFQKKETFDGKFLTQYLRTTPGRIIFNRRINEILN 605          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7EVT1_9PHAE0.000e+093.85DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
D1J788_ECTSI0.000e+090.78DNA-directed RNA polymerase subunit beta' n=8 Tax=... [more]
A0A0R6MFT6_UNDPI0.000e+084.69DNA-directed RNA polymerase subunit beta' n=25 Tax... [more]
A0A8F0F9J3_9PHAE0.000e+083.55DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
D1GJH3_FUCVE0.000e+079.35DNA-directed RNA polymerase subunit beta' n=3 Tax=... [more]
A0A141BSD2_9PHAE0.000e+078.37DNA-directed RNA polymerase subunit beta' n=14 Tax... [more]
A0A8F0JZT2_9PHAE0.000e+078.99DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
A0A8F0JYE1_9PHAE0.000e+073.32DNA-directed RNA polymerase subunit gamma n=1 Tax=... [more]
A0A8E6D698_9PHAE1.690e-30769.24DNA-directed RNA polymerase subunit beta' n=1 Tax=... [more]
A0A2I4Q2A7_9PHAE1.260e-29867.92DNA-directed RNA polymerase subunit beta' n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 232..511
e-value: 8.5E-150
score: 513.6
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 6..339
e-value: 2.8E-70
score: 237.1
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100coord: 486..618
e-value: 5.4E-30
score: 107.0
NoneNo IPR availableGENE3D1.10.40.90coord: 367..415
e-value: 9.7E-45
score: 154.1
NoneNo IPR availableGENE3D2.40.40.20coord: 344..476
e-value: 9.7E-45
score: 154.1
NoneNo IPR availablePANTHERPTHR19376:SF32DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1coord: 4..587
NoneNo IPR availablePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 4..587
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 6..612
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 341..397
e-value: 4.7E-9
score: 36.7
coord: 395..478
e-value: 1.1E-22
score: 81.0
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 486..605
e-value: 7.3E-12
score: 45.5
IPR034678DNA-directed RNA polymerase subunit RpoC1HAMAPMF_01323RNApol_bact_RpoC1coord: 1..614
score: 24.216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:124449..126305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14990.1mRNA_P-fluviatile_contig89.14990.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 124449..126305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14990.1 ID=prot_P-fluviatile_contig89.14990.1|Name=mRNA_P-fluviatile_contig89.14990.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=619bp
MKNFKQKFDYVKINLASPERIREWAEKILPNGELIGEVTEPETINYRTHK
PEKGGLFCEKIFGPIKNWECTCGLHKYKKKDVYFCEICGVELTESRVRRH
RMGYIKLLSPVVHIWYLKGSPSLLSSMLASPINELEAVIYNGKEPDQDED
VSKYEQLFLSSFYDTENEGFHYGKKRQGAEILYDRLKKIDLKLEIERNRN
IMFFETAKKKVEAAIKKIRIFENFLITGTRPEWMVLYFLPVLPPGIRPIV
KLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVISTEKRMIQEAV
DTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRS
VIIVGPQLKLNQCGLPYEMAIELFLPFLIYRLLSQGLSHSIKRAKKIIYG
NEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLV
CSAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPS
QDMVLGFYYLTTQNRKNLLGSNNYFANFKEVISAYEQKQLQIHSSIWVRC
PNDINLDSPLKFIKKITLSNTTNLIIYNNLQRKETITGELLVQYLRTTPG
RIIFNQCVNDILNKSEVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR007080RNA_pol_Rpb1_1
IPR042102RNA_pol_Rpb1_3_sf
IPR000722RNA_pol_asu
IPR007066RNA_pol_Rpb1_3
IPR034678RNApol_RpoC1