mRNA_P-fluviatile_contig89.14988.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A2R4QPT8_9PHAE (Photosystem I reaction center subunit II n=4 Tax=Phaeophyceae TaxID=2870 RepID=A0A2R4QPT8_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.420e-86 Identity = 121/132 (91.67%), Postives = 127/132 (96.21%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK 514
MSIYP ++MP FGGSTGGWLRSAEFEEKYVITWNS++EQLFE+PT GTALMLLGQNLLYLARKEQCLALGT LRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSN+GR PVGKRDFSIGKNPNPASIKWK
Sbjct: 1 MSIYPSKYMPIFGGSTGGWLRSAEFEEKYVITWNSEKEQLFEMPTAGTALMLLGQNLLYLARKEQCLALGTQLRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKNPNPASIKWK 132
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A0S0GAH9_COSCS (Photosystem I reaction center subunit II n=44 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GAH9_COSCS) HSP 1 Score: 257 bits (656), Expect = 8.190e-86 Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK 514
MS+YP ++MP FGGSTGGWLRSAEFEEKYVITWNS EQLFE+PT GTALMLLGQNLLYLARKEQCLALGT LRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSN+GR PVGKRDFSIGKNPNPASIKWK
Sbjct: 1 MSLYPSKYMPVFGGSTGGWLRSAEFEEKYVITWNSTTEQLFEMPTAGTALMLLGQNLLYLARKEQCLALGTQLRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRTPVGKRDFSIGKNPNPASIKWK 132
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A8F0FAL2_9PHAE (Photosystem I reaction center subunit II n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAL2_9PHAE) HSP 1 Score: 245 bits (625), Expect = 4.340e-81 Identity = 114/132 (86.36%), Postives = 122/132 (92.42%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK 514
M+I+P ++ P FGGSTGGWLRSAEFEEKYVITWN+ EQLFE+PT GTALML GQNLLYLARKEQCLALGT LRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSN GR PVGK+DFSIGKNPNPASIKW+
Sbjct: 1 MAIFPSKYTPIFGGSTGGWLRSAEFEEKYVITWNAPTEQLFEMPTAGTALMLKGQNLLYLARKEQCLALGTQLRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNAGRTPVGKKDFSIGKNPNPASIKWQ 132
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A2I4Q2A8_9PHAE (Photosystem I reaction center subunit II n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A8_9PHAE) HSP 1 Score: 235 bits (600), Expect = 2.890e-77 Identity = 108/131 (82.44%), Postives = 119/131 (90.84%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKW 511
M ++P ++ PTFGGSTGGWLRSAE EEKYVITW S++E+ FE+PT G ALML GQNLLY+ARKEQCLALGT LR LKIKDYKIYRIFPGGEIQFLHPKDGVFPETSN GR+PVGKRDFSIGKNPNPAS+KW
Sbjct: 1 MVVFPLKYTPTFGGSTGGWLRSAECEEKYVITWTSEKEKFFEMPTAGAALMLAGQNLLYMARKEQCLALGTQLRTLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNAGRLPVGKRDFSIGKNPNPASVKW 131
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A8E5XRI2_9PHAE (Photosystem I reaction center subunit II n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI2_9PHAE) HSP 1 Score: 235 bits (600), Expect = 2.890e-77 Identity = 109/133 (81.95%), Postives = 122/133 (91.73%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLK-IKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK 514
M+++P + +P FGGSTGGWLRSAE EEKY ITWNS +EQ+FE+PT G ALML G+NLLYLARKEQCLALGT LRK+K IKDYKIYRIFPGGE+QFLHPKDGVFPETSN+GRMPVGKRDFSIGKNPNPASIKW+
Sbjct: 1 MTVFPSKNVPLFGGSTGGWLRSAEVEEKYAITWNSPKEQIFEMPTAGAALMLQGENLLYLARKEQCLALGTQLRKVKKIKDYKIYRIFPGGEVQFLHPKDGVFPETSNEGRMPVGKRDFSIGKNPNPASIKWQ 133
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A8F0F7G4_9PHAE (Photosystem I reaction center subunit II n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7G4_9PHAE) HSP 1 Score: 225 bits (574), Expect = 2.910e-73 Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 2
Query: 131 PGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK 514
P Q+MP FGGSTGGWLRSAEFEEKYVITWNS +EQ FE+PT G ALMLLGQNLLYLARKEQCLALGT LR LKIKDYKIYRIFP GEIQFLHPKDGVFPE SN GR PVGKRDF+IG P+P +KW+
Sbjct: 5 PSQYMPVFGGSTGGWLRSAEFEEKYVITWNSTKEQFFEMPTAGAALMLLGQNLLYLARKEQCLALGTQLRTLKIKDYKIYRIFPSGEIQFLHPKDGVFPEISNIGRTPVGKRDFNIGLIPSPGELKWE 132
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: A0A7S6U9W3_9STRA (Photosystem I reaction center subunit II n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W3_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.050e-69 Identity = 96/131 (73.28%), Postives = 116/131 (88.55%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKW 511
M+ Y Q+ P FGGSTGGWLR+AE EEKY ITWN+ +EQ+FE+PTGG A+ML+G+NLLYLARKEQCLALGT LR L+IK+Y+IYRIFPGGE+Q+LHPKDGVFPE N GR+P+G +DFSIGKNPNPA+IK+
Sbjct: 1 MTFYLKQYTPIFGGSTGGWLRAAEVEEKYAITWNAPKEQVFEMPTGGAAVMLIGENLLYLARKEQCLALGTQLRSLRIKEYRIYRIFPGGEVQYLHPKDGVFPEKVNAGRIPIGTKDFSIGKNPNPATIKF 131
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: B2XT55_HETAK (Photosystem I reaction center subunit II n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT55_HETAK) HSP 1 Score: 208 bits (530), Expect = 1.600e-66 Identity = 95/124 (76.61%), Postives = 107/124 (86.29%), Query Frame = 2
Query: 140 FMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKW 511
F P FGGSTGGWLR+AE EEKYVITW+S +EQLFE+PTGG A+ML G+NLLYLARKEQCLALGT LR KI DYKIYR+FP GEIQ+LHPKDGVFPE N GR+ VG R+FSIGKNPNP S+K+
Sbjct: 8 FSPIFGGSTGGWLRAAEIEEKYVITWSSSKEQLFEMPTGGAAIMLQGENLLYLARKEQCLALGTQLRSFKINDYKIYRLFPNGEIQYLHPKDGVFPEKVNPGRLAVGSRNFSIGKNPNPVSVKF 131
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: UPI001EDDB867 (photosystem I reaction center subunit II (ferredoxin-binding) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=UPI001EDDB867) HSP 1 Score: 206 bits (523), Expect = 1.860e-65 Identity = 95/126 (75.40%), Postives = 107/126 (84.92%), Query Frame = 2
Query: 146 PTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKWK*TN 523
PTFGGSTGGWLRSAE EEKY ITWNS +EQ+FE+PTGG A+M G+NLLYLARKEQCLALGT LR KI +YKIYRIFP GE+QFLHPKDGVFPE +N GR+ R+FSIGKNPNPASIK+ T+
Sbjct: 10 PTFGGSTGGWLRSAEVEEKYAITWNSTKEQIFEMPTGGAAIMKTGENLLYLARKEQCLALGTQLRTFKINNYKIYRIFPSGEVQFLHPKDGVFPEKTNPGRIATNNRNFSIGKNPNPASIKFSGTS 135
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Match: B7T226_VAULI (Photosystem I reaction center subunit II n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T226_VAULI) HSP 1 Score: 203 bits (516), Expect = 2.170e-64 Identity = 94/131 (71.76%), Postives = 107/131 (81.68%), Query Frame = 2
Query: 119 MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALMLLGQNLLYLARKEQCLALGTALRKLKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNQGRMPVGKRDFSIGKNPNPASIKW 511
M++ + P FGGSTGGWLR+AE EEKY ITW S +EQ FE+PTGG A+ML QNLLYLARKEQCLALGT L+K KI DYKIYRIFP GE+QFLHPKDGVFPE N GR+ VG R+FSIGKNPNP S+K+
Sbjct: 1 MNLNLKSYFPKFGGSTGGWLRAAEVEEKYAITWTSSKEQTFEMPTGGAAVMLNDQNLLYLARKEQCLALGTQLKKFKINDYKIYRIFPNGEVQFLHPKDGVFPEKVNVGRLAVGSRNFSIGKNPNPISVKF 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14988.1 >prot_P-fluviatile_contig89.14988.1 ID=prot_P-fluviatile_contig89.14988.1|Name=mRNA_P-fluviatile_contig89.14988.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=133bp MSIYPGQFMPTFGGSTGGWLRSAEFEEKYVITWNSKEEQLFEIPTGGTALback to top mRNA from alignment at P-fluviatile_contig89:119716..120247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14988.1 ID=mRNA_P-fluviatile_contig89.14988.1|Name=mRNA_P-fluviatile_contig89.14988.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=532bp|location=Sequence derived from alignment at P-fluviatile_contig89:119716..120247+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:119716..120247+ >mRNA_P-fluviatile_contig89.14988.1 ID=mRNA_P-fluviatile_contig89.14988.1|Name=mRNA_P-fluviatile_contig89.14988.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=798bp|location=Sequence derived from alignment at P-fluviatile_contig89:119716..120247+ (Porterinema fluviatile SAG_2381)back to top |