mRNA_P-fluviatile_contig89.14981.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: D1J771_ECTSI (Cytochrome c-550 n=6 Tax=Ectocarpales TaxID=2877 RepID=D1J771_ECTSI) HSP 1 Score: 285 bits (730), Expect = 8.340e-95 Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 2
Query: 11 LVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
L+NLGTSSVLAIELDEATRTIP TSDGKT+VLTPEQVKRGKRLFN+SCGQCHVGGITKTNPNLGLD EALSLATPSRNNI GLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRM+SLDENDLVDIAGHILLQPKI+SEKWGGGKIYY
Sbjct: 14 LLNLGTSSVLAIELDEATRTIPATSDGKTIVLTPEQVKRGKRLFNSSCGQCHVGGITKTNPNLGLDTEALSLATPSRNNITGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMRSLDENDLVDIAGHILLQPKILSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A1I9LVF9_9PHAE (Cytochrome c-550 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVF9_9PHAE) HSP 1 Score: 278 bits (710), Expect = 9.130e-92 Identity = 137/150 (91.33%), Postives = 143/150 (95.33%), Query Frame = 2
Query: 5 ACLVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
A L+NL + S AIELDEATRTIPVTSDGKT+VLTPEQVKRGKRLFN+SCGQCHVGGITKTNPN+GLD EALSLATPSRNNI GLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRM+SLDENDLVDIAGHILLQPKIVSEKWGGGKIYY
Sbjct: 12 ASLLNLISCSAFAIELDEATRTIPVTSDGKTIVLTPEQVKRGKRLFNSSCGQCHVGGITKTNPNVGLDTEALSLATPSRNNITGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMRSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A0R6M468_UNDPI (Cytochrome c-550 n=36 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M468_UNDPI) HSP 1 Score: 277 bits (709), Expect = 1.300e-91 Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 2
Query: 5 ACLVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
ACL SSVLAI+LDEATRTIPVTSDGKT VLTPEQVKRGKRLFN+SCGQCHVGG+TKTNPNLGLD EALSLATP+RNNI GLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRM+SLDENDLVDIAGHILLQPKIVSEKWGGGKIYY
Sbjct: 12 ACLATSVGSSVLAIDLDEATRTIPVTSDGKTTVLTPEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDSEALSLATPARNNINGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMRSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A8F0FAG4_9PHAE (Photosystem II protein V n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAG4_9PHAE) HSP 1 Score: 276 bits (705), Expect = 5.250e-91 Identity = 136/150 (90.67%), Postives = 143/150 (95.33%), Query Frame = 2
Query: 5 ACLVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
ACL N SSVLAI+LDEATRTIPVTSDGKT VLTPEQVKRGKRLFN+SCGQCHVGGITKTNPNLGLDPEALSLATPSRNNI GLV+YMK+PTTYDGLESIAEIHPSIKSANIFTRM++LDE DLVDIAGHILLQPKI+SEKWGGGKIYY
Sbjct: 12 ACLANSVGSSVLAIDLDEATRTIPVTSDGKTTVLTPEQVKRGKRLFNSSCGQCHVGGITKTNPNLGLDPEALSLATPSRNNINGLVNYMKDPTTYDGLESIAEIHPSIKSANIFTRMRALDEKDLVDIAGHILLQPKILSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A0Y0JAL7_9PHAE (PsbV n=10 Tax=Fucales TaxID=3009 RepID=A0A0Y0JAL7_9PHAE) HSP 1 Score: 274 bits (700), Expect = 3.020e-90 Identity = 133/148 (89.86%), Postives = 142/148 (95.95%), Query Frame = 2
Query: 11 LVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
L+NL SVLAIELDEATRTIPVT+DGKT VLTPEQVKRGKRLFN+SCGQCHVGG+TKTNPNLGLDPEALSLATP+RNNI LVDYMK+PTT+DGLESIAEIHPSIKSANIFTRM+SLDENDL+DIAGHILLQPKIVSEKWGGGKIYY
Sbjct: 14 LINLTNLSVLAIELDEATRTIPVTNDGKTTVLTPEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPARNNINALVDYMKDPTTFDGLESIAEIHPSIKSANIFTRMRSLDENDLIDIAGHILLQPKIVSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A6B7EXK3_9PHAE (Photosystem II cytochrome c550 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXK3_9PHAE) HSP 1 Score: 273 bits (699), Expect = 4.740e-90 Identity = 133/144 (92.36%), Postives = 139/144 (96.53%), Query Frame = 2
Query: 23 GTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
+S LAIELDEATRTIP TSDGKT+VLTPEQVKRGKRLFN+SCGQCHVGG+TKTNPNLGLD EALSLATPSRNNI+GLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRM+SLDENDLVDIAGHILLQPKIVSEKWGGGKIYY
Sbjct: 21 SSSKALAIELDEATRTIPATSDGKTIVLTPEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDTEALSLATPSRNNISGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMRSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 164
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A8F0F791_9PHAE (Photosystem II protein V n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F791_9PHAE) HSP 1 Score: 263 bits (672), Expect = 5.400e-86 Identity = 127/149 (85.23%), Postives = 137/149 (91.95%), Query Frame = 2
Query: 8 CLVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
C N+ SV AIELDEATRTIPV GKT VLTPEQ+KRGKRLFN+SCGQCHVGGITKTNPNLGLDPEALSLA+P+RNNI GLVDYMKNPTTYDGLESIAEIHPSIKSANIF+RM+SLD++DL DIAGHIL+QPKIVSEKWGGGKIYY
Sbjct: 13 CFSNIFNPSVFAIELDEATRTIPVNGKGKTTVLTPEQLKRGKRLFNSSCGQCHVGGITKTNPNLGLDPEALSLASPARNNIDGLVDYMKNPTTYDGLESIAEIHPSIKSANIFSRMRSLDDDDLFDIAGHILIQPKIVSEKWGGGKIYY 161
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A8E6D6I5_9PHAE (Cytochrome c-550 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6I5_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.550e-82 Identity = 127/152 (83.55%), Postives = 138/152 (90.79%), Query Frame = 2
Query: 5 ACLVN--LGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
ACL++ L S+ AIELDEATRTI V S GKT +LTPEQVKRGKRLFN+SCGQCHVGG+TKTNPNLGLDPEALSLATP+R+NI GLVDYMKNPTTYDGLESIAEIHPSIKSA+IF RM+SL E+DLV IAGHILLQPKIVSEKWGGGKIYY
Sbjct: 18 ACLLSSSLLVSAAFAIELDEATRTISVDSTGKTTILTPEQVKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPARDNITGLVDYMKNPTTYDGLESIAEIHPSIKSADIFPRMRSLSEDDLVAIAGHILLQPKIVSEKWGGGKIYY 169
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A2I4Q2C0_9PHAE (Cytochrome c-550 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2C0_9PHAE) HSP 1 Score: 248 bits (633), Expect = 4.960e-80 Identity = 121/151 (80.13%), Postives = 134/151 (88.74%), Query Frame = 2
Query: 8 CLVN--LGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
CL + + + IELDEATRTI V +GKT VLT EQ+KRGKRLFN+SCGQCHVGG+TKTNPNLGLDPEALSLATP+RNNI GLVDYMK PTTYDGLESIAEIHPSIKSANIF+RM+SLD++DL DIAGHIL+QPKIVSEKWGGGKIYY
Sbjct: 14 CLFSSFISVPNTFGIELDEATRTIKVNKEGKTTVLTAEQLKRGKRLFNSSCGQCHVGGVTKTNPNLGLDPEALSLATPARNNIDGLVDYMKAPTTYDGLESIAEIHPSIKSANIFSRMRSLDDDDLFDIAGHILIQPKIVSEKWGGGKIYY 164
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Match: A0A7S6ZPA0_9STRA (Cytochrome c-550 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA0_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.820e-77 Identity = 117/151 (77.48%), Postives = 130/151 (86.09%), Query Frame = 2
Query: 2 FACLVNLGTSSVLAIELDEATRTIPVTSDGKTVVLTPEQVKRGKRLFNASCGQCHVGGITKTNPNLGLDPEALSLATPSRNNIAGLVDYMKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIVSEKWGGGKIYY 454
F N+ A+ELDEATRTIP+ + GKT +L+ EQVKRGKRLFN SCGQCHVGGITKTNPNLGLD EALSLATPSRN+I GLVDYMKNPTTYDGLESIAEIHPSIKSA+IF RM+SL E DLV IAGHILLQPK+++EKWGGGKIY+
Sbjct: 13 FLLFSNILGPVAFAVELDEATRTIPLDNTGKTTILSAEQVKRGKRLFNVSCGQCHVGGITKTNPNLGLDTEALSLATPSRNSITGLVDYMKNPTTYDGLESIAEIHPSIKSADIFPRMRSLSEEDLVSIAGHILLQPKVIAEKWGGGKIYF 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14981.1 >prot_P-fluviatile_contig89.14981.1 ID=prot_P-fluviatile_contig89.14981.1|Name=mRNA_P-fluviatile_contig89.14981.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=63bp MKNPTTYDGLESIAEIHPSIKSANIFTRMQSLDENDLVDIAGHILLQPKIback to top mRNA from alignment at P-fluviatile_contig89:103722..104619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14981.1 ID=mRNA_P-fluviatile_contig89.14981.1|Name=mRNA_P-fluviatile_contig89.14981.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=898bp|location=Sequence derived from alignment at P-fluviatile_contig89:103722..104619+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:103722..104619+ >mRNA_P-fluviatile_contig89.14981.1 ID=mRNA_P-fluviatile_contig89.14981.1|Name=mRNA_P-fluviatile_contig89.14981.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=378bp|location=Sequence derived from alignment at P-fluviatile_contig89:103722..104619+ (Porterinema fluviatile SAG_2381)back to top |