prot_P-fluviatile_contig89.14968.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14968.1
Unique Nameprot_P-fluviatile_contig89.14968.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length127
Homology
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: D1J733_ECTSI (30S ribosomal protein S13, chloroplastic n=6 Tax=Ectocarpales TaxID=2877 RepID=D1J733_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 8.540e-76
Identity = 120/126 (95.24%), Postives = 125/126 (99.21%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLGRDL+NNKKIKYALTAIYGIGLSRAKEIL+KAGLENVD+EGVRTKDLSDEDISN+R+VLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGK K
Sbjct:    1 MVRFLGRDLANNKKIKYALTAIYGIGLSRAKEILEKAGLENVDKEGVRTKDLSDEDISNLRKVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKNK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A6B7EUU3_9PHAE (30S ribosomal protein S13 n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A6B7EUU3_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 5.770e-74
Identity = 117/126 (92.86%), Postives = 123/126 (97.62%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLGRDL+NNK+IKYALT+IYGIGLSRAKEILDKAGLENVD EG+RTKDLSDE+ISNIR+VLE DYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGK K
Sbjct:    1 MVRFLGRDLANNKRIKYALTSIYGIGLSRAKEILDKAGLENVDREGIRTKDLSDEEISNIRKVLETDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKNK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A1I9LVX4_9PHAE (30S ribosomal protein S13, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX4_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.590e-68
Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLGRDL+NNKKIKYALTAIYGIGLSRA EILDKAGLE++D+E +RTKDLS E+ISNIR+VLEKDYQLE+DLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRG KK V GK K
Sbjct:    1 MVRFLGRDLANNKKIKYALTAIYGIGLSRATEILDKAGLESLDQERIRTKDLSGENISNIRKVLEKDYQLESDLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGVKKIVVGKNK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A0R6LUW3_UNDPI (30S ribosomal protein S13, chloroplastic n=26 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUW3_UNDPI)

HSP 1 Score: 209 bits (531), Expect = 1.030e-67
Identity = 110/126 (87.30%), Postives = 118/126 (93.65%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLG DL+NNKKIKYALT IYGIGLSRA+EILD AGL+  D+ GVRTKDLSDEDISN+R+VLEK+YQLEADL+RLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTN RTRRGGKKTVAGK K
Sbjct:    1 MVRFLGIDLANNKKIKYALTGIYGIGLSRAEEILDSAGLKAADDAGVRTKDLSDEDISNLRKVLEKNYQLEADLFRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNARTRRGGKKTVAGKNK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A2R4QQ15_9PHAE (30S ribosomal protein S13 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ15_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.400e-65
Identity = 106/126 (84.13%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLGRDL+NNKKIKYALT IYGIGLSRAKEIL+ AGL N+D+ G R KDLSDE+ISN+R+VLEK+YQLE DL R+TNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTN RTRRG KKTVAGK K
Sbjct:    1 MVRFLGRDLTNNKKIKYALTTIYGIGLSRAKEILESAGLTNIDQMGTRVKDLSDEEISNLRKVLEKNYQLEGDLVRITNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNARTRRGSKKTVAGKKK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A8F0FB58_9PHAE (Ribosomal protein S13 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB58_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 2.830e-65
Identity = 108/126 (85.71%), Postives = 113/126 (89.68%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRFLG DL NNKKI+YALTAIYGIGLSRAKEILD AGLEN DE G+RTKDLSDE+ISNIR++LEKDYQLE DL RLTNLNIKRLMENGSIKGRRHR GLPVRGQRTRTN RTRRG KK V GK K
Sbjct:    1 MVRFLGVDLINNKKIQYALTAIYGIGLSRAKEILDSAGLENADELGLRTKDLSDENISNIRKILEKDYQLEGDLVRLTNLNIKRLMENGSIKGRRHRVGLPVRGQRTRTNARTRRGAKKAVVGKKK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A141BSM2_9PHAE (30S ribosomal protein S13, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM2_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.150e-64
Identity = 103/126 (81.75%), Postives = 117/126 (92.86%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVR LGRDL+NNKKIKYALT IYGIGLSR+KEIL+ AGL+N +++G+R KDLSDE+IS++R++LEK+YQLE DL RLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTN RTRRGGKKTVAGK K
Sbjct:    1 MVRLLGRDLANNKKIKYALTTIYGIGLSRSKEILESAGLDNAEKKGIRVKDLSDEEISSLRKILEKNYQLEGDLLRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNARTRRGGKKTVAGKKK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A8F0JX21_9PHAE (Ribosomal protein S13 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JX21_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.230e-59
Identity = 100/126 (79.37%), Postives = 110/126 (87.30%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVR LGRDL N+KKIKYALTAIYGIGLSRAK+IL  AGL N+DE G+RTKDLSDEDISN+R+VLEK  +LE DL R   L+IKRLMENGSIKGRRHR GLPVRGQRTRTN RT+RGGKKT+AGK K
Sbjct:    1 MVRLLGRDLPNDKKIKYALTAIYGIGLSRAKDILKSAGLNNLDEMGIRTKDLSDEDISNLRKVLEKQDRLEGDLLRYGQLSIKRLMENGSIKGRRHRVGLPVRGQRTRTNARTKRGGKKTIAGKKK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A7S6U9Z0_9STRA (30S ribosomal protein S13, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.370e-56
Identity = 96/126 (76.19%), Postives = 111/126 (88.10%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVRF+G DL  NKK+KYALTAIYGIGLSRA+ IL KAGL NV+E+G+RT+DLSD++IS++R+VLE ++QLE DL RLTNLNIKRLME  SI+GRRHR GLPVRGQRTRTN RTRRG KKTVAGK K
Sbjct:    1 MVRFVGVDLPRNKKVKYALTAIYGIGLSRAEYILKKAGLINVEEKGLRTEDLSDQEISSLRKVLESEFQLEGDLRRLTNLNIKRLMEISSIRGRRHRVGLPVRGQRTRTNARTRRGSKKTVAGKKK 126          
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Match: A0A8E6D5X0_9PHAE (30S ribosomal protein S13, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5X0_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 2.170e-53
Identity = 91/126 (72.22%), Postives = 108/126 (85.71%), Query Frame = 0
Query:    1 MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTKDLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKTVAGKTK 126
            MVR LGRDL NNKKI+YALT IYGIGLSR++EIL+KAGL+++  +   TKDLSDE+IS +R+VLEKDY+LE +L RL +LNIK L +NG I+GRRHRAGLPVRGQRTRTN RTR+G KKTVAGK K
Sbjct:    1 MVRLLGRDLPNNKKIQYALTRIYGIGLSRSREILNKAGLKDLSIQNKMTKDLSDEEISTLRRVLEKDYRLEGELLRLNDLNIKHLKDNGCIRGRRHRAGLPVRGQRTRTNARTRKGTKKTVAGKKK 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J733_ECTSI8.540e-7695.2430S ribosomal protein S13, chloroplastic n=6 Tax=E... [more]
A0A6B7EUU3_9PHAE5.770e-7492.8630S ribosomal protein S13 n=3 Tax=Phaeophyceae Tax... [more]
A0A1I9LVX4_9PHAE3.590e-6888.1030S ribosomal protein S13, chloroplastic n=1 Tax=P... [more]
A0A0R6LUW3_UNDPI1.030e-6787.3030S ribosomal protein S13, chloroplastic n=26 Tax=... [more]
A0A2R4QQ15_9PHAE1.400e-6584.1330S ribosomal protein S13 n=3 Tax=Fucaceae TaxID=3... [more]
A0A8F0FB58_9PHAE2.830e-6585.71Ribosomal protein S13 n=1 Tax=Desmarestia aculeata... [more]
A0A141BSM2_9PHAE1.150e-6481.7530S ribosomal protein S13, chloroplastic n=14 Tax=... [more]
A0A8F0JX21_9PHAE1.230e-5979.37Ribosomal protein S13 n=1 Tax=Protohalopteris sp. ... [more]
A0A7S6U9Z0_9STRA1.370e-5676.1930S ribosomal protein S13, chloroplastic n=1 Tax=S... [more]
A0A8E6D5X0_9PHAE2.170e-5372.2230S ribosomal protein S13, chloroplastic n=1 Tax=I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 3..113
e-value: 2.7E-23
score: 82.8
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 1..126
e-value: 3.1E-37
score: 125.4
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 4..116
score: 35.334
IPR001892Ribosomal protein S13HAMAPMF_01315Ribosomal_S13_S18coord: 1..123
score: 24.974
NoneNo IPR availableGENE3D1.10.8.50coord: 1..75
e-value: 1.6E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..125
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.10coord: 78..126
e-value: 1.5E-18
score: 68.0
IPR019980Ribosomal protein S13, bacterial-typePANTHERPTHR10871:SF137S RIBOSOMAL PROTEIN SWS2, MITOCHONDRIALcoord: 1..125
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 92..105
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 2..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:54107..54487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14968.1mRNA_P-fluviatile_contig89.14968.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 54068..54690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14968.1 ID=prot_P-fluviatile_contig89.14968.1|Name=mRNA_P-fluviatile_contig89.14968.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=127bp
MVRFLGRDLSNNKKIKYALTAIYGIGLSRAKEILDKAGLENVDEEGVRTK
DLSDEDISNIRQVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGL
PVRGQRTRTNGRTRRGGKKTVAGKTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001892Ribosomal_S13
IPR02743730s_Rbsml_prot_S13_C
IPR019980Ribosomal_S13_bac-type
IPR018269Ribosomal_S13_CS
IPR010979Ribosomal_S13-like_H2TH