mRNA_P-fluviatile_contig89.14966.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A7T8JJZ4_SCYLO (30S ribosomal protein S5, chloroplastic n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A7T8JJZ4_SCYLO) HSP 1 Score: 299 bits (766), Expect = 2.880e-101 Identity = 157/174 (90.23%), Postives = 165/174 (94.83%), Query Frame = 2
Query: 128 IKSFITFMNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
+K ITFM QNK NWEKRVVKVSRVSKVVKGGKKISFRATVVVGDME+QVGVGVGKAEEVSTA+KKAETDA+KN+I + IAEGKTIPHAT+G+ECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNN LNNARATITALKSLDTIKQVMEKRQISLEQVLGK
Sbjct: 1 MKFLITFMTNQNKDINWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEYQVGVGVGKAEEVSTAIKKAETDARKNVIIVPIAEGKTIPHATVGVECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNPLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 174
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A1I9LVF8_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVF8_9PHAE) HSP 1 Score: 278 bits (712), Expect = 3.910e-93 Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 2
Query: 149 MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEH-QVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
M T+NK +WEKRVVK+SRVSKVVKGGKKISFRATVVVGD+E QVGVGVGKA++VSTAVKKAETD KN+I + IAEGKTIPHAT GIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNAR+TITALKSL T+KQVMEKRQISLEQVLGK
Sbjct: 1 MTTENKKSSWEKRVVKISRVSKVVKGGKKISFRATVVVGDIEKKQVGVGVGKAKDVSTAVKKAETDGIKNVINVQIAEGKTIPHATFGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARSTITALKSLSTVKQVMEKRQISLEQVLGK 168
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A0S0GN90_COSCS (30S ribosomal protein S5, chloroplastic n=30 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GN90_COSCS) HSP 1 Score: 271 bits (692), Expect = 4.190e-90 Identity = 143/167 (85.63%), Postives = 154/167 (92.22%), Query Frame = 2
Query: 149 MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
M T NK WE+RVVK+SRVSKVVKGGKKISFRATVVVGDME +VGVGVGKAEEVSTA+KKAETDAKKN++TI I EGKTIPHA +GI GSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNN LNNARATI ALKSL+TI+QVM+KRQISLEQ+LGK
Sbjct: 1 MTTPNKKIRWEQRVVKISRVSKVVKGGKKISFRATVVVGDMEERVGVGVGKAEEVSTAIKKAETDAKKNVLTIPIVEGKTIPHAMVGIAGGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNPLNNARATIVALKSLNTIEQVMQKRQISLEQMLGK 167
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A8F0JXK8_9PHAE (Ribosomal protein S5 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXK8_9PHAE) HSP 1 Score: 257 bits (657), Expect = 9.500e-85 Identity = 133/167 (79.64%), Postives = 150/167 (89.82%), Query Frame = 2
Query: 149 MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
M T N WEKRVVK+SRVSKVVKGGKKISFRATVVVGDME +VGVG+GKAEEVSTA+KKAETDA+KN+I + I+EGKTIPH +GI+ GSKVFIRPAVPGTGVIAG SVRIVLELAGIKNILSKQLGSNN+LNNARATI L+ L T+K+++EKRQISLEQ+LGK
Sbjct: 1 MTTSNNKIVWEKRVVKISRVSKVVKGGKKISFRATVVVGDMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIIGIDGGSKVFIRPAVPGTGVIAGSSVRIVLELAGIKNILSKQLGSNNALNNARATIVGLEKLITVKEILEKRQISLEQLLGK 167
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A141BSM5_9PHAE (30S ribosomal protein S5, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM5_9PHAE) HSP 1 Score: 256 bits (654), Expect = 2.540e-84 Identity = 134/167 (80.24%), Postives = 151/167 (90.42%), Query Frame = 2
Query: 149 MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
M+T+N+ WE+RVVKVSRVSKVVKGGKKISFRATVV+GDME +VGVGVGKA+EVS AVKKAETDAKKNII I +AEGKTIPH+ +G+ GSK+FIRPAV GTGVIAGGSVRIVLELAGIKNILSKQLGSNN LNNARATI ALK L TI+QV++KRQIS EQ++GK
Sbjct: 1 MSTENEKIIWEQRVVKVSRVSKVVKGGKKISFRATVVIGDMEQKVGVGVGKAKEVSIAVKKAETDAKKNIINIPVAEGKTIPHSMIGVAGGSKIFIRPAVQGTGVIAGGSVRIVLELAGIKNILSKQLGSNNPLNNARATIMALKDLTTIEQVIQKRQISFEQIIGK 167
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: D1GJR6_FUCVE (30S ribosomal protein S5, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR6_FUCVE) HSP 1 Score: 255 bits (652), Expect = 5.120e-84 Identity = 134/167 (80.24%), Postives = 150/167 (89.82%), Query Frame = 2
Query: 149 MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
MNT+N WE+RVVKVSRVSKVVKGGKKISFRATVVVGDME +VGVGVGKA+EVSTAVKKAETDAKKN+I I I EGKTIPH+ +GI GSKVFIRPAVPGTGVIAGGSVRIVLELAG+KNILS+QLGSNN LNNARATI ALK L T+++V++KR+I EQ+LGK
Sbjct: 1 MNTENTKIIWEQRVVKVSRVSKVVKGGKKISFRATVVVGDMEDKVGVGVGKAKEVSTAVKKAETDAKKNVINIPIVEGKTIPHSMIGIAGGSKVFIRPAVPGTGVIAGGSVRIVLELAGVKNILSEQLGSNNPLNNARATILALKDLTTVQRVIQKRKIPFEQILGK 167
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A2I4Q2I9_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I9_9PHAE) HSP 1 Score: 233 bits (595), Expect = 2.470e-75 Identity = 121/158 (76.58%), Postives = 142/158 (89.87%), Query Frame = 2
Query: 176 WEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
WEKRVVKVSRVSKVVKGGKKISFRATVV+GD +++VGVG+GKA EVS A+KKAET+AKKN+ITI++ G+TI H+ LG GSKVFIRPAVPGTGVIAGGSVR VLELAGIKNILSKQLGSNN+LNNARATI L++L+T +V++KRQIS+E +LGK
Sbjct: 11 WEKRVVKVSRVSKVVKGGKKISFRATVVIGDKKNKVGVGMGKAVEVSNAIKKAETNAKKNVITITVESGQTISHSILGAAGGSKVFIRPAVPGTGVIAGGSVRSVLELAGIKNILSKQLGSNNALNNARATINGLRNLNTKAEVIKKRQISVEHLLGK 168
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A8E6D2P2_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2P2_9PHAE) HSP 1 Score: 225 bits (574), Expect = 4.100e-72 Identity = 113/169 (66.86%), Postives = 141/169 (83.43%), Query Frame = 2
Query: 140 ITFMNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLG 646
+T NT NK WEKRVVK++RVSKVVKGGKK+SFRAT+V G+ VGVG+GKAEE + A+KKAE +AKKN++ + + +G+TIPH+ +G G KVFIRPAVPGTGVIAGG+VR+VLELAG+KNILSKQLGSNN+LNNARAT+ LK++ I Q+ +KRQIS+EQVLG
Sbjct: 1 MTNRNTLNKNVRWEKRVVKIARVSKVVKGGKKLSFRATLVTGNRNGLVGVGIGKAEETALAIKKAEVNAKKNLVKVPLVKGQTIPHSIIGNTGGCKVFIRPAVPGTGVIAGGAVRVVLELAGVKNILSKQLGSNNALNNARATVIGLKNIKAIGQIAQKRQISIEQVLG 169
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: A0A8E5BG80_9PHAE (Ribosomal protein S5 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BG80_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.950e-69 Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 2
Query: 176 WEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLGK 649
WE+RV+K+SRVSKVVKGGKKISFRA V+VGD + VGVG+GKA VSTA+KKAE + KKN+ITI + + TI H TLG+ G+ VFIRPAVPGTGVIAGGSVRIVLELAGIKN+LSKQLGS++ LNNARA I ALKSL TI+ M KRQ+S E V GK
Sbjct: 7 WEQRVIKISRVSKVVKGGKKISFRAIVIVGDNQKSVGVGIGKANGVSTAIKKAEFNGKKNLITIPLTKENTITHTTLGVTSGANVFIRPAVPGTGVIAGGSVRIVLELAGIKNVLSKQLGSDSVLNNARAAICALKSLKTIEDTMAKRQLSFEGVFGK 164
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Match: B7T1W8_VAULI (30S ribosomal protein S5, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1W8_VAULI) HSP 1 Score: 201 bits (511), Expect = 2.790e-62 Identity = 104/163 (63.80%), Postives = 129/163 (79.14%), Query Frame = 2
Query: 158 QNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGKAEEVSTAVKKAETDAKKNIITISIAEGKTIPHATLGIECGSKVFIRPAVPGTGVIAGGSVRIVLELAGIKNILSKQLGSNNSLNNARATITALKSLDTIKQVMEKRQISLEQVLG 646
Q K WE+RVV++SRV KVVKGGKK+SFRATV++G+ VGVGVGKA+EVSTA++KA A+KN+I I + + KTIPH +GI+ SKV IR A PGTGVIAG S+RIVLEL G++NIL+KQLG NN LNNARATI ALK L TI QV ++R+ISLE++
Sbjct: 24 QEKTIRWEQRVVQISRVVKVVKGGKKLSFRATVIIGNKNSHVGVGVGKADEVSTAIQKAVNHARKNLIQIPLTKTKTIPHNIIGIDGASKVLIRTAGPGTGVIAGSSIRIVLELVGVQNILAKQLGGNNLLNNARATIAALKGLKTIHQVAQEREISLEKLFN 186 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14966.1 >prot_P-fluviatile_contig89.14966.1 ID=prot_P-fluviatile_contig89.14966.1|Name=mRNA_P-fluviatile_contig89.14966.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=168bp MNTQNKVGNWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEHQVGVGVGback to top mRNA from alignment at P-fluviatile_contig89:51886..52537+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14966.1 ID=mRNA_P-fluviatile_contig89.14966.1|Name=mRNA_P-fluviatile_contig89.14966.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=652bp|location=Sequence derived from alignment at P-fluviatile_contig89:51886..52537+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:51886..52537+ >mRNA_P-fluviatile_contig89.14966.1 ID=mRNA_P-fluviatile_contig89.14966.1|Name=mRNA_P-fluviatile_contig89.14966.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1008bp|location=Sequence derived from alignment at P-fluviatile_contig89:51886..52537+ (Porterinema fluviatile SAG_2381)back to top |