mRNA_P-fluviatile_contig89.14964.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A0R6M4Y3_UNDPI (50S ribosomal protein L14, chloroplastic n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4Y3_UNDPI) HSP 1 Score: 232 bits (592), Expect = 1.610e-72 Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAV+IRTKKA SRKDGTSIRFDDNAAVIIN+DKNPKGTRIFGPIAREIRDK+FTKIVSLAPEVI
Sbjct: 1 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVVIRTKKAASRKDGTSIRFDDNAAVIINMDKNPKGTRIFGPIAREIRDKDFTKIVSLAPEVI 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A8E5XRJ8_9PHAE (50S ribosomal protein L14, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ8_9PHAE) HSP 1 Score: 221 bits (564), Expect = 2.590e-68 Identity = 110/121 (90.91%), Postives = 115/121 (95.04%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQPQTYLTVADNTGAKKIMCIR+LGG R YAKLGDII+GVVKEA PNML KRSDIVKAVIIRT+K VSRKDGTSIRFDDNAAVIIN+DKNP+GTRIFGPIAREIRDK FTKIVSLAPEVI
Sbjct: 1 MIQPQTYLTVADNTGAKKIMCIRILGGNRHYAKLGDIIVGVVKEAAPNMLIKRSDIVKAVIIRTRKVVSRKDGTSIRFDDNAAVIINVDKNPRGTRIFGPIAREIRDKEFTKIVSLAPEVI 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A7S6U9Y5_9STRA (50S ribosomal protein L14, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Y5_9STRA) HSP 1 Score: 210 bits (535), Expect = 5.800e-64 Identity = 104/121 (85.95%), Postives = 114/121 (94.21%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQ QT LT+ADNTGAKK+MCIRVLGG RKYA++GDIIIGVVKEA PNM+ KRSDIV+AVI+RTKKAVSRKDGT+IRFDDNAAV+IN DKNP+GTRIFGPIAREIRDK FTKIVSLAPEVI
Sbjct: 1 MIQTQTCLTIADNTGAKKLMCIRVLGGNRKYAQVGDIIIGVVKEALPNMIIKRSDIVRAVIVRTKKAVSRKDGTNIRFDDNAAVVINNDKNPRGTRIFGPIAREIRDKEFTKIVSLAPEVI 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: B2XTE5_HETAK (50S ribosomal protein L14, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTE5_HETAK) HSP 1 Score: 200 bits (509), Expect = 4.530e-60 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQPQT LTVADNTGAKK+MCIRVLGG R YA +GDIIIGVVK+A PNM TKRSDIV+AV++RTKK + RKDG SIRFDDNAAVIIN D NPKGTRIFGPIAREIRD++F KIVSLA EV+
Sbjct: 1 MIQPQTLLTVADNTGAKKVMCIRVLGGNRSYASIGDIIIGVVKDAIPNMATKRSDIVRAVVVRTKKTIRRKDGLSIRFDDNAAVIINNDNNPKGTRIFGPIAREIRDRDFMKIVSLAAEVV 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A023HCF1_9STRA (50S ribosomal protein L14, chloroplastic n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A023HCF1_9STRA) HSP 1 Score: 200 bits (509), Expect = 4.530e-60 Identity = 96/121 (79.34%), Postives = 109/121 (90.08%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MI PQT LTVADNTGAKKIMCIRVLGG RKYAK+GD IIGVVKEATPNM KRSD+V+AV++RT+K + R DG IRFDDNAAVI+N+D NP+GTRIFGP+AREIRDKNF+KIVSLAPEV+
Sbjct: 1 MIYPQTLLTVADNTGAKKIMCIRVLGGSRKYAKIGDTIIGVVKEATPNMPIKRSDVVRAVVVRTRKTIRRPDGMFIRFDDNAAVIVNMDSNPRGTRIFGPVAREIRDKNFSKIVSLAPEVL 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A2U9NM75_9STRA (50S ribosomal protein L14, chloroplastic n=1 Tax=Proboscia sp. TaxID=1923967 RepID=A0A2U9NM75_9STRA) HSP 1 Score: 200 bits (508), Expect = 6.390e-60 Identity = 95/121 (78.51%), Postives = 108/121 (89.26%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MI PQT L VADNTGAKKIMCIRVLGG RKYAK+GD IIGVVKEA PNML KRSDIV+A+I+RT K + R+DG SIRFDDNA VI+N++ NPKGTR+FGP+AREIRDKNF+KIVSLAPEV+
Sbjct: 1 MIYPQTILNVADNTGAKKIMCIRVLGGHRKYAKIGDTIIGVVKEALPNMLIKRSDIVRAIIVRTSKTIRRQDGMSIRFDDNAVVIVNLENNPKGTRVFGPVAREIRDKNFSKIVSLAPEVL 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: RK14_GUITH (50S ribosomal protein L14, chloroplastic n=7 Tax=Cryptophyceae TaxID=3027 RepID=RK14_GUITH) HSP 1 Score: 199 bits (507), Expect = 9.020e-60 Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQ QTYLTVADN+GAKKIMCIR+LGG RKYA +GD+IIGVVK+ATPNM KRSD+V+AVI+RTK + RKDG SIRFDDNAAVIIN + NP+GTR+FGPIARE+RDK+FTKIVSLAPEV+
Sbjct: 1 MIQTQTYLTVADNSGAKKIMCIRILGGNRKYASIGDVIIGVVKDATPNMPVKRSDVVRAVIMRTKNTIRRKDGMSIRFDDNAAVIINKENNPRGTRVFGPIARELRDKDFTKIVSLAPEVL 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A516ZA13_9STRA (50S ribosomal protein L14, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A516ZA13_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.530e-59 Identity = 94/121 (77.69%), Postives = 109/121 (90.08%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQPQTYLT+ADNTGA+KIMCIR+LGG RKY ++GD+IIGVVK+A+PNM KRSDIV+AV++RT+ V R DG SIRFDDNAAVIIN + NP+GTRIFGPIAREIRDK FTKIVSLAPEV+
Sbjct: 1 MIQPQTYLTIADNTGARKIMCIRILGGNRKYGRIGDVIIGVVKDASPNMPIKRSDIVRAVVVRTRHTVRRNDGMSIRFDDNAAVIINKENNPRGTRIFGPIAREIRDKRFTKIVSLAPEVL 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: B7T1X4_VAULI (50S ribosomal protein L14, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1X4_VAULI) HSP 1 Score: 198 bits (504), Expect = 2.530e-59 Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQ Q+YLTVADNTGAKKIMCI VLGG R+YAK+GDIIIGVVKEA PNM KRSDI++AV++RTKKA+ R DGT I+FDDNAAVIIN++KNP+GTRIFGPIAREIRDK F+KIVSLAPEV+
Sbjct: 1 MIQSQSYLTVADNTGAKKIMCICVLGGNRQYAKVGDIIIGVVKEAIPNMPIKRSDIIRAVVVRTKKAIKRIDGTLIQFDDNAAVIINLEKNPRGTRIFGPIAREIRDKEFSKIVSLAPEVL 121
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Match: A0A7R6WDW7_9EUKA (50S ribosomal protein L14, chloroplastic n=1 Tax=Haptophyceae sp. NIES-3900 TaxID=2748608 RepID=A0A7R6WDW7_9EUKA) HSP 1 Score: 198 bits (504), Expect = 2.530e-59 Identity = 91/121 (75.21%), Postives = 110/121 (90.91%), Query Frame = 3
Query: 918 MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLTKRSDIVKAVIIRTKKAVSRKDGTSIRFDDNAAVIINIDKNPKGTRIFGPIAREIRDKNFTKIVSLAPEVI 1280
MIQPQT L VADN+GAKK+MCIR+LGG RKYA LGD+I+GVVKEA+PNM KRSD+V+AV++RTKK V R +GTS+RFDDNAAVIIN + NP+GTR+FGP+ARE+RDKNFTKI+SLAPEV+
Sbjct: 1 MIQPQTCLQVADNSGAKKVMCIRILGGNRKYATLGDVIVGVVKEASPNMPVKRSDVVRAVVVRTKKTVRRNEGTSVRFDDNAAVIINKENNPRGTRVFGPVARELRDKNFTKIISLAPEVL 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14964.1 >prot_P-fluviatile_contig89.14964.1 ID=prot_P-fluviatile_contig89.14964.1|Name=mRNA_P-fluviatile_contig89.14964.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=122bp MIQPQTYLTVADNTGAKKIMCIRVLGGRRKYAKLGDIIIGVVKEATPNMLback to top mRNA from alignment at P-fluviatile_contig89:48542..49868+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14964.1 ID=mRNA_P-fluviatile_contig89.14964.1|Name=mRNA_P-fluviatile_contig89.14964.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1327bp|location=Sequence derived from alignment at P-fluviatile_contig89:48542..49868+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:48542..49868+ >mRNA_P-fluviatile_contig89.14964.1 ID=mRNA_P-fluviatile_contig89.14964.1|Name=mRNA_P-fluviatile_contig89.14964.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=732bp|location=Sequence derived from alignment at P-fluviatile_contig89:48542..49868+ (Porterinema fluviatile SAG_2381)back to top |