prot_P-fluviatile_contig89.14962.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig89.14962.1
Unique Name	prot_P-fluviatile_contig89.14962.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	176

Homology

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: D1J746_ECTSI (30S ribosomal protein S3, chloroplastic n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J746_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 1.020e-108
Identity = 158/176 (89.77%), Postives = 173/176 (98.30%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGIVQED+SLWYSG+NSY+SFLKEDY+IREYIY+FLL+NKVGY+GI KLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLR LD+ELS+LLKN+KVLINIVEITKPYTEA+ILVD+LVKKLEER+SFRMCIREILKRYR EDEL+GIK+QIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTEATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A0S0FBE5_COSCS (30S ribosomal protein S3, chloroplastic n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0FBE5_COSCS)

HSP 1 Score: 308 bits (789), Expect = 9.340e-105
Identity = 156/176 (88.64%), Postives = 167/176 (94.89%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGI+QEDRSLWYSGTNSYISFLKEDY IREYI +FL+ N VGY+GI KLIIKR+ETKKR+YIEIQSVVPGRIVGKSG+ LRTLDQELS LLKN+KVLINIVEITKPYTEASILVDVLVKKLEER+SFR CIREIL+RYR EDEL+GIKVQIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGIIQEDRSLWYSGTNSYISFLKEDYTIREYISQFLISNNVGYSGITKLIIKRNETKKRVYIEIQSVVPGRIVGKSGSLLRTLDQELSALLKNKKVLINIVEITKPYTEASILVDVLVKKLEERVSFRKCIREILRRYRTEDELKGIKVQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A1I9LVT7_9PHAE (30S ribosomal protein S3, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT7_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 6.650e-98
Identity = 149/176 (84.66%), Postives = 160/176 (90.91%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGIV+EDRSLWYS TNSY SFLKEDYK+REYI +F L+NKV Y+GI  LIIKRDE KKRIYIEIQSVVPGRIVGKSGAFLR LD+ELSILLKN+KVLINIVEI  PYTEASILVDV +KKL ERISFRMCIR IL RYR+ +EL+GIKVQIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGIVEEDRSLWYSKTNSYPSFLKEDYKVREYISEFFLLNKVSYSGITNLIIKRDERKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSILLKNKKVLINIVEIKNPYTEASILVDVFMKKLRERISFRMCIRAILTRYRMHNELKGIKVQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A8F0FAX9_9PHAE (Ribosomal protein S3 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAX9_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 3.840e-97
Identity = 145/176 (82.39%), Postives = 163/176 (92.61%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGIVQ+DRSLWYSGT+SYI+FLKEDYKIREYIY+FL  + V Y+GI K+IIKRDETKK+IYIE+QSVVPGRIVGKSG+ LR LDQ LS+LLKN+KVLINIVEI +PY EA+ILVD+LV+KLEERISFR CIREIL+RYR E EL+GIKVQIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGIVQDDRSLWYSGTSSYITFLKEDYKIREYIYQFLNSSNVDYSGITKIIIKRDETKKKIYIELQSVVPGRIVGKSGSILRVLDQNLSLLLKNKKVLINIVEIKQPYKEATILVDILVRKLEERISFRKCIREILQRYRTEGELKGIKVQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A141BSN5_9PHAE (30S ribosomal protein S3, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSN5_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.280e-88
Identity = 128/176 (72.73%), Postives = 157/176 (89.20%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLG +Q+DRSLWYSG N+YISFLK DY+IREYIY FL +NKVGY+GI K+II+ D  KK++Y+EIQSVVPGRI+GKSG+ L+ LD++L +L+ +RKVLINIVEI +PY EASILVD+LVKKLEER+++R C+REIL+RYR E+ L+GIK+QIAGRLNGAEIAR EW
Sbjct:    1 MGHKTHPLGFRLGGLQDDRSLWYSGVNTYISFLKNDYQIREYIYSFLSLNKVGYSGITKIIIRNDGIKKKVYVEIQSVVPGRIIGKSGSLLKKLDEKLQLLILDRKVLINIVEIEQPYQEASILVDILVKKLEERVAYRKCVREILQRYRTEEGLKGIKIQIAGRLNGAEIARIEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: D1GJS6_FUCVE (30S ribosomal protein S3, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJS6_FUCVE)

HSP 1 Score: 263 bits (671), Expect = 8.560e-87
Identity = 127/176 (72.16%), Postives = 155/176 (88.07%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLG +Q DRSLWYS TNSYI  LK+DY IREYI  FL +N+VGY+GI K+IIK DET+K+IY+EIQSVVPGRI+GKSG  L+ LD++L  L+K++KVLINI+E+ +PY EASILVD+LVKKLEER+++R C+REIL+RYR E+ L+GIK+QIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGGLQTDRSLWYSKTNSYIYLLKDDYAIREYIRTFLFLNQVGYSGITKIIIKSDETRKKIYVEIQSVVPGRIIGKSGLLLKELDEKLQSLIKDKKVLINIIEVEQPYQEASILVDILVKKLEERVAYRKCVREILQRYRTEEGLKGIKIQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A8F0JYH0_9PHAE (Ribosomal protein S3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYH0_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 4.770e-77
Identity = 123/177 (69.49%), Postives = 145/177 (81.92%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSG-TNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGIVQ+DRSLWYS   +SYI+FLK+DY IRE I + L  N + ++GI K+II+R E KK++YIEIQS VP RIVG SG+ +R LD+ LS LLK  KVL+NIVEI +PY EA ILVD+LVKKLEER SFR CIR IL+RYR  +E+ GIK+QIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGIVQQDRSLWYSNRASSYINFLKQDYAIREVISQTLKSNNLVFSGITKIIIRRPERKKKVYIEIQSAVPSRIVGNSGSTIRNLDKRLSTLLKPEKVLLNIVEIEEPYAEAVILVDILVKKLEERTSFRRCIRAILQRYRTVNEINGIKIQIAGRLNGAEIARTEW 177

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A2I4Q2H9_9PHAE (30S ribosomal protein S3, chloroplastic n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2I4Q2H9_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 3.560e-74
Identity = 114/176 (64.77%), Postives = 146/176 (82.95%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGI+  D+S WYS  NSY   LKEDY+IR+ I+K +L N    +G+  +IIKR E KK+IYIEI+SV P +IVG+SG+ LR LD+++S L++ + +LINI++ITKPYTEA++LVDVL+  L++RISFR CIR+IL+RYRIE+EL GIK+QIAGRLNGAEIARTEW
Sbjct:    1 MGHKTHPLGFRLGILNPDQSFWYSSPNSYTLNLKEDYEIRKLIFKLILTNNSTSSGVTNIIIKRSERKKKIYIEIKSVAPEQIVGESGSRLRKLDKKISSLVEPKTILINIIKITKPYTEATLLVDVLIFNLQKRISFRKCIRKILERYRIENELNGIKIQIAGRLNGAEIARTEW 176

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BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A8E5BDG2_9PHAE (Ribosomal protein S3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BDG2_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.810e-66
Identity = 103/176 (58.52%), Postives = 137/176 (77.84%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MG KTHPLGFR+GI++EDRSLW S   SYI FLK DYKIR YI +F ++NK  Y+G  +++IKRDE KK++YIEIQ+  P  ++G+SGA L TL+++L++   + K++IN+VEI   Y EASILVD+L + L +R+ FR CIR  LKRY+   +++GIKVQIAGRLNGAE+ARTEW
Sbjct:    1 MGQKTHPLGFRVGILKEDRSLWCSKKKSYIEFLKADYKIRAYIKEFWVLNKSSYSGDTEILIKRDENKKKVYIEIQAAFPKNLIGESGALLETLNKKLNLFFPSEKIMINMVEIENYYAEASILVDLLAQNLIDRVPFRKCIRTTLKRYKNAKKVKGIKVQIAGRLNGAEMARTEW 176

[Close]

BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Match: A0A8E5XRJ9_9PHAE (30S ribosomal protein S3, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ9_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.210e-65
Identity = 104/176 (59.09%), Postives = 141/176 (80.11%), Query Frame = 0

Query:    1 MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVNKVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSILLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYRIEDELQGIKVQIAGRLNGAEIARTEW 176
            MGHKTHPLGFRLGI+QED+SLWY+    Y S +K+DY IR+ I K L V ++  +GI K++I R+E KK IYIEIQ+ +PGRIVGK G  L+ LD++LS ++ ++++LINIV++  PYTEA++L  +LVKKLEER+SFR  ++EI++RY  +  L+GIKVQI+GRLNGAEIART+W
Sbjct:    1 MGHKTHPLGFRLGIIQEDKSLWYNEAKLYASTIKQDYMIRDIISKLLRVKRIISSGITKIVIHRNERKK-IYIEIQTAIPGRIVGKGGGVLKALDEKLSSVIIDQEILINIVQVKDPYTEATLLAAILVKKLEERVSFRKAMKEIVERYETQS-LKGIKVQISGRLNGAEIARTQW 174

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig89.14962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J746_ECTSI	1.020e-108	89.77	30S ribosomal protein S3, chloroplastic n=3 Tax=Ec...	[more]
A0A0S0FBE5_COSCS	9.340e-105	88.64	30S ribosomal protein S3, chloroplastic n=33 Tax=P...	[more]
A0A1I9LVT7_9PHAE	6.650e-98	84.66	30S ribosomal protein S3, chloroplastic n=1 Tax=Pl...	[more]
A0A8F0FAX9_9PHAE	3.840e-97	82.39	Ribosomal protein S3 n=1 Tax=Desmarestia aculeata ...	[more]
A0A141BSN5_9PHAE	1.280e-88	72.73	30S ribosomal protein S3, chloroplastic n=13 Tax=S...	[more]
D1GJS6_FUCVE	8.560e-87	72.16	30S ribosomal protein S3, chloroplastic n=3 Tax=Fu...	[more]
A0A8F0JYH0_9PHAE	4.770e-77	69.49	Ribosomal protein S3 n=1 Tax=Protohalopteris sp. T...	[more]
A0A2I4Q2H9_9PHAE	3.560e-74	64.77	30S ribosomal protein S3, chloroplastic n=2 Tax=Eu...	[more]
A0A8E5BDG2_9PHAE	2.810e-66	58.52	Ribosomal protein S3 n=1 Tax=Phaeophyceae sp. TaxI...	[more]
A0A8E5XRJ9_9PHAE	2.210e-65	59.09	30S ribosomal protein S3, chloroplastic n=1 Tax=Is...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005704	Ribosomal protein S3, bacterial-type	TIGRFAM	TIGR01009	TIGR01009	coord: 1..176 e-value: 1.7E-43 score: 146.8
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 116..176 e-value: 1.1E-13 score: 53.3
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 116..176
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 129..176 e-value: 4.2E-11 score: 43.2
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 44..117 e-value: 4.6E-8 score: 32.8
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 39..115 score: 11.405
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 19..115 e-value: 2.3E-16 score: 61.6
None	No IPR available	PANTHER	PTHR11760:SF19	30S RIBOSOMAL PROTEIN S3	coord: 1..176
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 1..176
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 63..176
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..41
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 2..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig89	contig	P-fluviatile_contig89:47860..48387 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig89.14962.1	mRNA_P-fluviatile_contig89.14962.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig89 47621..48387 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig89.14962.1 ID=prot_P-fluviatile_contig89.14962.1|Name=mRNA_P-fluviatile_contig89.14962.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=176bp
MGHKTHPLGFRLGIVQEDRSLWYSGTNSYISFLKEDYKIREYIYKFLLVN
KVGYAGIAKLIIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRTLDQELSI
LLKNRKVLINIVEITKPYTEASILVDVLVKKLEERISFRMCIREILKRYR
IEDELQGIKVQIAGRLNGAEIARTEW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005704	Ribosomal_S3_bac-typ
IPR036419	Ribosomal_S3_C_sf
IPR001351	Ribosomal_S3_C
IPR004044	KH_dom_type_2
IPR015946	KH_dom-like_a/b
IPR009019	KH_sf_prok-type