mRNA_P-fluviatile_contig88.14934.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig88.14934.1
Unique NamemRNA_P-fluviatile_contig88.14934.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: D7FPY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY2_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 3.350e-143
Identity = 209/250 (83.60%), Postives = 217/250 (86.80%), Query Frame = 1
Query:   22 MGEFQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAME--AAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRPLDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYS 765
            MGEFQRWNTHHSHVVP+EVCG QLNIAQDPTSDNLGTTIWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGM+FALQGAHVTFTDL+EVVPLLQRNVTMNLGGQA+E  A                     AP  R KA VLEYDWG+PLD LSPPYDYIVACDCVYVERLVESLVWSMA+CSGRGTTVLVASEKREE+TYAKFR RLSEDF VRQ PRRHMDKAYDHENSEVL+CKLRRT S
Sbjct:    1 MGEFQRWNTHHSHVVPIEVCGTQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGMYFALQGAHVTFTDLIEVVPLLQRNVTMNLGGQAVEDAAGTTTASDETRGRGKGGKSVAAAPPARPKAKVLEYDWGKPLDGLSPPYDYIVACDCVYVERLVESLVWSMARCSGRGTTVLVASEKREEVTYAKFRARLSEDFAVRQAPRRHMDKAYDHENSEVLVCKLRRTNS 250          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A835YRK7_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK7_9STRA)

HSP 1 Score: 180 bits (457), Expect = 8.500e-51
Identity = 102/232 (43.97%), Postives = 132/232 (56.90%), Query Frame = 1
Query:   61 VVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRPLDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRR 756
            VV + V G ++ IAQ P S NLGT++WDASVILV Y+  N + +++R ++GKRVLELGAGCGLAG++ A  GA VT TDL  V+P+L +N   NLGG                                K  V EY WG P+DAL  PYDYI+ACDCVYVE LVE LVWS+ Q +G  TTV+V    R   T        S   T+  V      ++Y  E++++L CK +R
Sbjct:   12 VVKVSVRGGEICIAQQPGSGNLGTSVWDASVILVHYLNDNSKQFNQRTMDGKRVLELGAGCGLAGIYCATLGADVTLTDLEPVLPILNQNARRNLGGMPESV---------------------------KYKVQEYCWGNPVDALDAPYDYIIACDCVYVESLVEVLVWSLEQLAGASTTVVVC---RHVHTSKLVDLSTSTLLTIPAVRASCAVRSYRSEHADLLFCKRKR 213          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A2V0P2U2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P2U2_9CHLO)

HSP 1 Score: 181 bits (460), Expect = 1.240e-49
Identity = 99/258 (38.37%), Postives = 146/258 (56.59%), Query Frame = 1
Query:   31 FQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRA-KANVLEYDWGRP----------LDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYS 765
             +RWNTH S  V +E+CG  L +AQDP S+NLGTT+WDAS+++ +Y E++ +   +SR ++ GKR ++LG+G GL G+ FAL GA V  TD++ V+PLL+RN   NL   A+ AA                    A A  A +  V E DW +P             +SPP+DYI+A DCVY E L+  L  ++   S   TT+LVA+E+R E   A F +  S  FT++++P   M + Y H   ++ + K ++  S
Sbjct:    3 LERWNTHFSTSVEVELCGVTLRLAQDPASENLGTTVWDASIVMAKYFEKHIRKGDFSRAKVRGKRAIDLGSGMGLGGLAFALLGADVVLTDMLPVLPLLRRNYENNLSPAALRAASGDG----------------AHAEAAGRVAVAELDWSQPSHFTGGGEGGAGVVSPPFDYILAADCVYHEHLLRHLYRALLALSDSRTTILVANERRSESVQAAFSDLFSHSFTMKRIPHSKMAEGYSHPAIQLTILKRKKEAS 244          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: E1ZD88_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD88_CHLVA)

HSP 1 Score: 179 bits (455), Expect = 2.880e-49
Identity = 100/246 (40.65%), Postives = 135/246 (54.88%), Query Frame = 1
Query:   31 FQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRPL--DALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRR 756
             +RWNTH S  V  E+ G  L +AQDP S NLGTT+WDAS++L +Y+E+N +   +SR ++ G++ LELGAG GLAGM  AL GA V FTD+ +V+PLLQRNV  N+   A++                      A A    A V   DW  P    A  PPYD+I+A DCVY E  V  L+ ++    G  T  +VA+E R +  +  F +R    FT+R+V    MD  Y H    + L K R+
Sbjct:    2 LERWNTHFSTTVEQELLGIDLQLAQDPNSSNLGTTVWDASIVLAKYIEKNSRRGDFSRPKVRGRQALELGAGMGLAGMALALLGADVAFTDIGDVLPLLQRNVDQNISTAALKVKDAAW----------------AAAEVGAARVASLDWSDPACYAAFHPPYDFILAADCVYSELAVPHLLAAVLHMGGPRTQTIVANEFRSQTVHDLFMQRFGRHFTIRKVAPNKMDANYQHPLIHIYLLKRRK 231          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A5J4Y5H2_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5H2_9CHLO)

HSP 1 Score: 176 bits (445), Expect = 7.010e-49
Identity = 90/251 (35.86%), Postives = 141/251 (56.18%), Query Frame = 1
Query:   37 RWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGR--PLDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYSSSKG 777
            RWNTHHS  V +E+ G+ L++AQDP +++LGTT+WD+S++L +++E+N +   ++R RL+GKR +ELGAG GL G  FAL G   T TD  EV+ LLQRN   NL   A+                          T     V E DW        ++PP+DY++A DCVY E++VE  + ++   +   +TV+V +E R E  +++F     + FT+++ PR  MD  + H   ++L+ + R+   +  G
Sbjct:    9 RWNTHHSTQVDVELFGNTLHLAQDPNTNHLGTTVWDSSIVLAKFLEKNAKKGDFARHRLKGKRAIELGAGMGLGGFAFALLGCDTTVTDTAEVISLLQRNYENNLSPAALRGQEMSP-------------------TAGHVTVQELDWSNLEHYATVNPPFDYVLAADCVYHEQIVEDFLRTVLAMTHSKSTVVVVNELRSEAVHSRFTSLFEQHFTIKRTPRSKMDAVHQHSAIDILILRRRKAADAGGG 240          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A8J9SIG8_9CHLO (Protein-lysine methyltransferase METTL21D n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SIG8_9CHLO)

HSP 1 Score: 166 bits (420), Expect = 2.230e-45
Identity = 92/256 (35.94%), Postives = 141/256 (55.08%), Query Frame = 1
Query:   22 MGEFQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRPLDALSP--PYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYSSSKG 777
            M  F+RWNTH S  V +E+ G  + ++QDP+S NLGTT+WDAS++L +++E+N +   +SR  ++GKR +ELGAG GL GM FAL GA V  TDL ++VPL+++NV  N    A+                             K +V E DWG     L    P+ +++A DCVY E  +  L  ++   +   +TV++A+E R E   A+F +   E FTV++VP   +D  + H +  + + K R++    KG
Sbjct:    1 MEMFERWNTHLSTSVNVELFGTDVRMSQDPSSMNLGTTVWDASIVLAKFLEKNARKGEFSRANVKGKRAIELGAGPGLGGMAFALLGADVLLTDLADIVPLIRKNVDANFTSAALHGREGPWGQQA-----------------GKLSVQELDWGNEAHILQADGPFAFVLAADCVYHEEHIFGLRQTILALTDLKSTVVIANELRSESVQAQFMKLFEESFTVKKVPHSKLDARHRHSSIMLYILKRRKSQPPDKG 239          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A2P6V8H3_9CHLO (Lysine methyltransferase METTL21D isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8H3_9CHLO)

HSP 1 Score: 169 bits (428), Expect = 2.720e-45
Identity = 96/255 (37.65%), Postives = 135/255 (52.94%), Query Frame = 1
Query:   31 FQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRPL----DALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYSSSKG 777
             +RWNTH S  V  E+ G +L +AQDP S+NLGTT+WDAS++L +Y+E+N +   +SR+R+ GKR LELGAG GLAGM  AL G  V FTD+ +V+PLL+ NV  N+   A++                      A A      V   DW         A  PPYD+I+A DCVY E  V  L+ ++    G  T  +V +E R +  + +F  +    F +R+VP    D+ Y H    + L K R+     +G
Sbjct:    2 LERWNTHFSTTVQQELFGIELQLAQDPNSNNLGTTVWDASIVLAKYIEKNSRRGDFSRQRVRGKRALELGAGMGLAGMALALLGCDVAFTDIGDVLPLLRHNVHSNISQAALKLKDAAW----------------AAAEVGGTLVTSLDWADRAAYADPAFKPPYDFILAADCVYSELAVPHLLATVLAMGGPRTQTIVTNEFRSQTVHDEFMLQFGRHFAIRKVPANKQDQNYQHTLIHIYLLKRRKVPLGEEG 240          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: I3STE9_LOTJA (Uncharacterized protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3STE9_LOTJA)

HSP 1 Score: 166 bits (419), Expect = 9.860e-45
Identity = 93/242 (38.43%), Postives = 137/242 (56.61%), Query Frame = 1
Query:   28 EFQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRP--LDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLL 741
            E  R NT  +  +PLEV GH+L  +QDP+S +LGTT+WDAS++L +++ERN +   +S  +L+GKRV+ELGAGCG++G   AL G  V  TD  EV+PLLQRNV  N+  + M+ +                     P +     V E  WG    + A+ PP+DYI+  D VYVE L+E L+ +    SG  TT+L+  E R    + K  +   E+F V+ V +  MD+ Y H + ++ +
Sbjct:    2 ELDRLNTPTTFEMPLEVLGHELQFSQDPSSKHLGTTVWDASLVLAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGFGMALLGCDVVVTDQKEVLPLLQRNVERNVS-RVMQKS---------------------PESFGSIKVSELQWGDDSHIKAVDPPFDYIIGTDVVYVEHLLEPLLQTTLALSGPRTTILLGYEIRNTQVHEKMLQMWKENFDVKTVSKSKMDETYQHPSIQLFI 221          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A2P6TLS3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLS3_CHLSO)

HSP 1 Score: 168 bits (426), Expect = 1.030e-44
Identity = 95/246 (38.62%), Postives = 134/246 (54.47%), Query Frame = 1
Query:   31 FQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWG-RPLDA-LSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRR 756
             +RWNTH S  V  E+ G    +AQDP S NLGTT+WDAS++L +Y+E+N +   +SR ++ GKR LELGAG GLAGM  AL GA V FTD+ +V+PLL+RNV  N+   A++                      A +   + +V   DW  R   A   PPYD+I+A DCVY E  V  L+ ++    G  T  ++ +E R +  + +F  +    FT+R+V    MD  Y H    + L K R+
Sbjct:    2 LERWNTHFSTTVNQELFGIDFQLAQDPNSSNLGTTVWDASIVLAKYIEKNSRRGDFSRPKVRGKRALELGAGMGLAGMALALLGAEVVFTDIGDVLPLLRRNVEQNISPAALKLRDAGW----------------AASEVGRTSVASLDWSDRSCYADFKPPYDFILAADCVYSELAVPHLLATVLAMGGPRTQAIITNEFRSQTVHDEFMAQFGRHFTIRKVAAGKMDANYQHPLIHIYLLKRRK 231          
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Match: A0A6N2BAS0_SOLCI (Uncharacterized protein n=3 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=A0A6N2BAS0_SOLCI)

HSP 1 Score: 166 bits (419), Expect = 2.480e-44
Identity = 93/250 (37.20%), Postives = 133/250 (53.20%), Query Frame = 1
Query:   37 RWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYMERNPQL--YSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLLQRNVTMNLGGQAMEAAXXXXXXXXXXXXXXXXXXXXAPATRAKANVLEYDWGRP--LDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEKREEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYSSSK 774
            R N+ H+  + ++V GHQL   QDP S +LGTT+WDAS++LV+++ERN +   +S  +L GKRV+ELGAGCG+AG   AL G  V  TD  EV+PLL RNV  N        +                     P +       E DWG    + A+SPP+DYI+  D VY E L+E L+ ++   SG  TT+L+  E R    + K  E     F V+ VP+  MD  Y H + ++ +   +   S+S+
Sbjct:   13 RLNSPHTSAILIDVLGHQLQFCQDPNSKHLGTTVWDASMVLVKFLERNCRKGRFSPSKLRGKRVIELGAGCGVAGFGMALLGCDVVSTDQTEVLPLLMRNVERNTSRIIQTISD--------------------PDSFGSIQAAELDWGNETHIKAVSPPFDYIIGTDVVYAEHLLEPLLQTIIALSGPKTTILLGHEIRSTNVHEKMLETWKRHFEVKTVPKAKMDSTYQHPSIQLYIMSFKSQGSTSE 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig88.14934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY2_ECTSI3.350e-14383.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRK7_9STRA8.500e-5143.97Putative methyltransferase-domain-containing prote... [more]
A0A2V0P2U2_9CHLO1.240e-4938.37Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
E1ZD88_CHLVA2.880e-4940.65Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A5J4Y5H2_9CHLO7.010e-4935.86Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A8J9SIG8_9CHLO2.230e-4535.94Protein-lysine methyltransferase METTL21D n=1 Tax=... [more]
A0A2P6V8H3_9CHLO2.720e-4537.65Lysine methyltransferase METTL21D isoform X1 n=1 T... [more]
I3STE9_LOTJA9.860e-4538.43Uncharacterized protein n=1 Tax=Lotus japonicus Ta... [more]
A0A2P6TLS3_CHLSO1.030e-4438.62Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A6N2BAS0_SOLCI2.480e-4437.20Uncharacterized protein n=3 Tax=Solanum subgen. Ly... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig88contigP-fluviatile_contig88:70771..74134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.3
Seed ortholog evalue1.1e-115
Seed eggNOG ortholog2880.D7FPY2
Preferred nameVCPKMT
KEGG koko:K21806
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.lysine N-methyltransferase activity
EggNOG OGsKOG2793@1,KOG2793@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-01_008220.1
Exons5
Model size1231
Cds size1056
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.3205564-UTR-P-fluviatile_contig88:70770..707911622817297.3205564-UTR-P-fluviatile_contig88:70770..70791Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 70771..70791 +
1693571975.5052526-UTR-P-fluviatile_contig88:70770..707911693571975.5052526-UTR-P-fluviatile_contig88:70770..70791Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 70771..70791 +
1622817297.3872325-UTR-P-fluviatile_contig88:73980..741341622817297.3872325-UTR-P-fluviatile_contig88:73980..74134Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 73981..74134 +
1693571975.566028-UTR-P-fluviatile_contig88:73980..741341693571975.566028-UTR-P-fluviatile_contig88:73980..74134Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 73981..74134 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.3313255-CDS-P-fluviatile_contig88:70791..708751622817297.3313255-CDS-P-fluviatile_contig88:70791..70875Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 70792..70875 +
1693571975.5154965-CDS-P-fluviatile_contig88:70791..708751693571975.5154965-CDS-P-fluviatile_contig88:70791..70875Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 70792..70875 +
1622817297.3417056-CDS-P-fluviatile_contig88:71578..717731622817297.3417056-CDS-P-fluviatile_contig88:71578..71773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 71579..71773 +
1693571975.5252628-CDS-P-fluviatile_contig88:71578..717731693571975.5252628-CDS-P-fluviatile_contig88:71578..71773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 71579..71773 +
1622817297.3521116-CDS-P-fluviatile_contig88:72439..725951622817297.3521116-CDS-P-fluviatile_contig88:72439..72595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 72440..72595 +
1693571975.5350695-CDS-P-fluviatile_contig88:72439..725951693571975.5350695-CDS-P-fluviatile_contig88:72439..72595Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 72440..72595 +
1622817297.3629782-CDS-P-fluviatile_contig88:73054..732481622817297.3629782-CDS-P-fluviatile_contig88:73054..73248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 73055..73248 +
1693571975.5448375-CDS-P-fluviatile_contig88:73054..732481693571975.5448375-CDS-P-fluviatile_contig88:73054..73248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 73055..73248 +
1622817297.3729603-CDS-P-fluviatile_contig88:73553..739801622817297.3729603-CDS-P-fluviatile_contig88:73553..73980Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 73554..73980 +
1693571975.5550332-CDS-P-fluviatile_contig88:73553..739801693571975.5550332-CDS-P-fluviatile_contig88:73553..73980Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 73554..73980 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig88.14934.1prot_P-fluviatile_contig88.14934.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig88 70792..73980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig88.14934.1

>prot_P-fluviatile_contig88.14934.1 ID=prot_P-fluviatile_contig88.14934.1|Name=mRNA_P-fluviatile_contig88.14934.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=352bp
MGEFQRWNTHHSHVVPLEVCGHQLNIAQDPTSDNLGTTIWDASVILVRYM
ERNPQLYSRRRLEGKRVLELGAGCGLAGMFFALQGAHVTFTDLMEVVPLL
QRNVTMNLGGQAMEAAESASGGAGGKGSKAAAATPTAPATRAKANVLEYD
WGRPLDALSPPYDYIVACDCVYVERLVESLVWSMAQCSGRGTTVLVASEK
REEITYAKFRERLSEDFTVRQVPRRHMDKAYDHENSEVLLCKLRRTYSSS
KGKYEGEGGKGVGSCDVAEEAVPVQVSEGVGTMEFVVSDDGLAPAVEEET
VIAARATGAAATAEGDAERLSLSGVTLSPSQSGGPTGVGLLKTVGAGDPI
R*
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mRNA from alignment at P-fluviatile_contig88:70771..74134+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig88.14934.1 ID=mRNA_P-fluviatile_contig88.14934.1|Name=mRNA_P-fluviatile_contig88.14934.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3364bp|location=Sequence derived from alignment at P-fluviatile_contig88:70771..74134+ (Porterinema fluviatile SAG_2381)
CCCACACCAGCAAAGAAAAGGATGGGCGAATTCCAGCGATGGAACACTCA TCATTCTCACGTCGTACCCTTGGAAGTCTGCGGCCATCAGCTGAATATCG CTCAGGTATAAAAAAATTCACGTCCTTGTTTTCAGATTTTCAAACTGCCT CTTCGGCCATGTGCGTTGTTTTGTGTGTGTGGCGGTTGAATCACAAGTTT TTCAGCCACCACACTGACCAAACTTCATATGCTGAACGGCCTCGCACGTC GAAACGGTTGTGCCTGCGTCCGTTTCTCGCTTGCTGCAAACAAGGTAGGT GGGGCCCCTTCAACACAGCGAATGGAGAGTCGAAAAAGAACCCGTAGCAC ACGGGACTGTCAAAAGATTCACGGACCGCAGCTGCTGTGGATTGTCTCGA TACGTCCTGCACTGGACATCCCTTACGGCGTCTTCTGGCTGTTCCTATCA AATCATTTCGCCGACAATAGTGCGAACGTTGCACGCAACCATCGTTTGAG TTATCTATTGAAGAGTAGTGTTCTCCAGTTTACTTCCCAGCAGTACATCA TTTGTCCACGTGAACCGCGTTTTTTTCTTTTTTCTGCGTGTTGGCCACAC CTCGTGCCGAAAAATTGCTTCCGCGGTTTCTTGTTTCATCTGTCTGCTGG ATTCCGTTAGACGACTCTTGAATGGCTGAACTGATAAATGGTGAAAGGGT CCATGGCCTACCACCTGTTGCGTGGGTACGCGATGACGGCCTTCACCGTC TTGCCGTCTCTCTCCTCTCTCGTCTGCCCCCGTCTCTCTCGTGCCATCGA AAAACAAGGACCCAACGTCGGACAACCTCGGCACCACGATCTGGGATGCC AGCGTGATCTTGGTCCGATATATGGAGCGAAACCCGCAGCTGTACTCTAG GCGCAGGCTGGAGGGGAAACGAGTCCTGGAGCTCGGCGCGGGGTGTGGGT TGGCCGGAATGTTTTTCGCGTTGCAAGGCGCGCACGTCACCTTCACCGAC TTGGTAAGATGCGTGACCGGGTGGGGGTGCTTTCGAGTGCGGCAATCTAT AGATCAGGTGCCTCCATTTCAGGTCGAAAAACAGGCTCGAATTGGTATCT GTGCATTGCGTGTTGACGGGGTCGGGGTGAGCATCGCGTCGCGCTTGACG TTTTCCGGTTCGCTCGGCCGCCGCAGGCCAGTGTCTTGTTTCAATGACGG CCCCACATTTGCAGTTGAAGTGGGATGGGATAATGTGGGATAGGATAATG AGGGATGGTATACTCAACCGACCGCAGTTGGTCACGAAACTTGACCCGAG CGCACGCACGGCAGCGCCACATGAAAACGTGACCGGGAACGGAATCGTCA TAAATCCTGCGTAAATCACCAGGTTGGCGGAAGTTTGCCGGAGCGTGTGT CCCTTCTCTTTGCCCCGGCTCGACAAAGCAGCGAAAGACGGTATGACATG TTACCGCCGAAGCGCGCGGCTAGCCCGTGTTCGGCGAAAGGATGCCCCCA CCCTGCTCCTACTAGCAGGTGGTGTTCGAATTTGGCCACTTCTTATGTTC GTTCCTGCCCCCCCTCCGCCCTGGCTGATGCAGAGTTCAGATCAAAGATC ATCTCCATGAAAAAAATTTCCTTGGGATATTGAAAAATGAAACTCACACC CGCCGCGCTGCAACGGCAGATGGAAGTGGTCCCTCTACTCCAAAGGAACG TCACCATGAATCTTGGCGGACAGGCCATGGAAGCTGCTGAAAGCGCTTCG GGCGGCGCGGGCGGCAAAGGAAGTAAAGCTGCTGCCGCTACCCCCACTGC CCCCGCCACACGCGCAAAAGCCAACGTAAGGGAAGCCATGAAGATACCGC AAGCATTTTGTGGGTGTCTTCAGGGTATTGCGTTATGTGAATGAGATCAG GGGGGGGGGGAGTGAGCTATCTTCACGTTGCCGAAGACGCATGTTTATAC TCTCCAGACTGGGGCCAAAATCGCGCCCGAGCACCGGAGGTTTGCCGCTG TTGTAGGCTTCGTTTTGCGGCCTTCTGCGCCCCAAACAGCTGTCGTGGGT CGCGATATAGCCGCTGTTCTGACGTGTGACGAAGCGACTCTCCCCTTGCT TTCGCGACTCCCGTCAACACAGGTGCACGACGAACTTCGGTTCACCATTT TCTTGCTTTTCTTCCGCCATGCCCTTCCGTTTTTGTCTTCGCGGAACGCC ACACTCGCCCCAAACTATTTGTGCACACGCATGCGTTCATGCAAGCGCGC AACTCTCTCTCTCTTTCTCTCGGCACGAGCAAAGGTGCTCGAATACGACT GGGGAAGGCCTCTGGATGCGCTGTCTCCCCCGTACGACTACATCGTCGCC TGCGACTGCGTGTACGTCGAGCGGCTGGTAGAATCCCTGGTCTGGTCTAT GGCGCAGTGCTCCGGCAGGGGGACGACGGTACTCGTGGCCAGTGAGAAGC GGGAAGAAATCACGTACGCCAAGTTTCGGTGAGTGAAACAACGCCTTCCG TGGCAAAAAATCTCAAGAGGGTGGTTGAGCATCCACCCTCCCTGCGGTAC GCAGCGTGAACGCTCAACCAGGCATACGAGCAAGCCCGCCGCTGCGTTTT TCTCGAGGCGTGCTCTGCGAGCATCCAAGAATGCCACGCATTTGCTGCCG CAGTCACCCGGTCAAGTCTCACTCTGCTTTGGCCTGACTACGCCGTGTTC TTGCCGGATTCGTCGCTAGGCTAGTTTTGCCCACTCTCTGTCCGTTGCGG GTCCATTTTGTGCCTTTGGTCCTGTGCTTGTAGGGAGCGACTGAGCGAAG ACTTCACGGTGAGGCAAGTGCCCAGGAGACACATGGACAAGGCGTACGAT CACGAGAACAGCGAGGTGCTCTTGTGCAAGCTGCGTCGAACCTACAGCTC CAGCAAGGGCAAGTACGAGGGGGAAGGAGGCAAGGGAGTTGGTTCTTGCG ATGTTGCGGAGGAGGCTGTGCCCGTGCAGGTGTCCGAAGGGGTGGGCACA ATGGAGTTCGTTGTGAGCGACGATGGGCTGGCCCCGGCAGTCGAGGAAGA GACGGTGATAGCGGCACGAGCAACAGGAGCGGCGGCAACAGCAGAAGGAG ATGCGGAAAGGCTGTCTCTCAGCGGTGTGACGCTGTCGCCGTCGCAGAGT GGCGGTCCAACTGGGGTGGGCTTGTTAAAAACCGTCGGAGCCGGCGACCC GATTAGATAGGGCCGGCGCGAAGAGAGGGGAAATTGGCGATGGTGATGAG TGGCGTCGTGCCGCATCGGAGAGAGATTATTTGTTTTGTGTGTGAACCAA ATTGAATCGCAAGAGAGTTAGAATTGCCGGAGTATTGATCGTGCAAAACA CGGACGTGTGGGGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig88:70771..74134+

>mRNA_P-fluviatile_contig88.14934.1 ID=mRNA_P-fluviatile_contig88.14934.1|Name=mRNA_P-fluviatile_contig88.14934.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2112bp|location=Sequence derived from alignment at P-fluviatile_contig88:70771..74134+ (Porterinema fluviatile SAG_2381)
ATGGGCGAATTCCAGCGATGGAACACTCATCATTCTCACGTCGTACCCTT
GGAAGTCTGCGGCCATCAGCTGAATATCGCTCAGATGGGCGAATTCCAGC
GATGGAACACTCATCATTCTCACGTCGTACCCTTGGAAGTCTGCGGCCAT
CAGCTGAATATCGCTCAGGACCCAACGTCGGACAACCTCGGCACCACGAT
CTGGGATGCCAGCGTGATCTTGGTCCGATATATGGAGCGAAACCCGCAGC
TGTACTCTAGGCGCAGGCTGGAGGGGAAACGAGTCCTGGAGCTCGGCGCG
GGGTGTGGGTTGGCCGGAATGTTTTTCGCGTTGCAAGGCGCGCACGTCAC
CTTCACCGACTTGGACCCAACGTCGGACAACCTCGGCACCACGATCTGGG
ATGCCAGCGTGATCTTGGTCCGATATATGGAGCGAAACCCGCAGCTGTAC
TCTAGGCGCAGGCTGGAGGGGAAACGAGTCCTGGAGCTCGGCGCGGGGTG
TGGGTTGGCCGGAATGTTTTTCGCGTTGCAAGGCGCGCACGTCACCTTCA
CCGACTTGATGGAAGTGGTCCCTCTACTCCAAAGGAACGTCACCATGAAT
CTTGGCGGACAGGCCATGGAAGCTGCTGAAAGCGCTTCGGGCGGCGCGGG
CGGCAAAGGAAGTAAAGCTGCTGCCGCTACCCCCACTGCCCCCGCCACAC
GCGCAAAAGCCAACATGGAAGTGGTCCCTCTACTCCAAAGGAACGTCACC
ATGAATCTTGGCGGACAGGCCATGGAAGCTGCTGAAAGCGCTTCGGGCGG
CGCGGGCGGCAAAGGAAGTAAAGCTGCTGCCGCTACCCCCACTGCCCCCG
CCACACGCGCAAAAGCCAACGTGCTCGAATACGACTGGGGAAGGCCTCTG
GATGCGCTGTCTCCCCCGTACGACTACATCGTCGCCTGCGACTGCGTGTA
CGTCGAGCGGCTGGTAGAATCCCTGGTCTGGTCTATGGCGCAGTGCTCCG
GCAGGGGGACGACGGTACTCGTGGCCAGTGAGAAGCGGGAAGAAATCACG
TACGCCAAGTTTCGGTGCTCGAATACGACTGGGGAAGGCCTCTGGATGCG
CTGTCTCCCCCGTACGACTACATCGTCGCCTGCGACTGCGTGTACGTCGA
GCGGCTGGTAGAATCCCTGGTCTGGTCTATGGCGCAGTGCTCCGGCAGGG
GGACGACGGTACTCGTGGCCAGTGAGAAGCGGGAAGAAATCACGTACGCC
AAGTTTCGGGAGCGACTGAGCGAAGACTTCACGGTGAGGCAAGTGCCCAG
GAGACACATGGACAAGGCGTACGATCACGAGAACAGCGAGGTGCTCTTGT
GCAAGCTGCGTCGAACCTACAGCTCCAGCAAGGGCAAGTACGAGGGGGAA
GGAGGCAAGGGAGTTGGTTCTTGCGATGTTGCGGAGGAGGCTGTGCCCGT
GCAGGTGTCCGAAGGGGTGGGCACAATGGAGTTCGTTGTGAGCGACGATG
GGCTGGCCCCGGCAGTCGAGGAAGAGACGGTGATAGCGGCACGAGCAACA
GGAGCGGCGGCAACAGCAGAAGGAGATGCGGAAAGGCTGTCTCTCAGCGG
TGTGACGCTGTCGCCGTCGCAGAGTGGCGGTCCAACTGGGGTGGGCTTGT
TAAAAACCGTCGGAGCCGGCGACCCGATTAGATAGGGAGCGACTGAGCGA
AGACTTCACGGTGAGGCAAGTGCCCAGGAGACACATGGACAAGGCGTACG
ATCACGAGAACAGCGAGGTGCTCTTGTGCAAGCTGCGTCGAACCTACAGC
TCCAGCAAGGGCAAGTACGAGGGGGAAGGAGGCAAGGGAGTTGGTTCTTG
CGATGTTGCGGAGGAGGCTGTGCCCGTGCAGGTGTCCGAAGGGGTGGGCA
CAATGGAGTTCGTTGTGAGCGACGATGGGCTGGCCCCGGCAGTCGAGGAA
GAGACGGTGATAGCGGCACGAGCAACAGGAGCGGCGGCAACAGCAGAAGG
AGATGCGGAAAGGCTGTCTCTCAGCGGTGTGACGCTGTCGCCGTCGCAGA
GTGGCGGTCCAACTGGGGTGGGCTTGTTAAAAACCGTCGGAGCCGGCGAC
CCGATTAGATAG
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