mRNA_P-fluviatile_contig12.1438.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1438.1 vs. uniprot
Match: D8LDF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF1_ECTSI) HSP 1 Score: 862 bits (2228), Expect = 5.510e-307 Identity = 428/539 (79.41%), Postives = 472/539 (87.57%), Query Frame = 1
Query: 1 MNIGTGPEASFRDGCLSLRAATLDKMRAPQSPGFSGQIPNGLGKQPLSSYRTPPVVGWGHYTDGLKDKGRPVESLTGKNTPGPQYQLDKLTCGQQVQSRFQTAPTPVFGSSQRPPLNGEGCVSPGPMTAVVNVNAQPPGPKYSMAGAPWRNERKRAEKSPGPGDYRVYGALGEQKESTRPSFKGFILGGSGVTRDMALPTRYVPGPGHYAWAEKDAPKQPGGKFGQAAQQRPAPRNEPRPAPGQYTIPSTLGTLTDSRFRTVVAPGFGSPPAAD-QRPHSAAGRLGSGPGPGSYDVGRVDSLAVAKKPLSTEQSCLSFTIKPPTTARPTSIRERKLEELDPESLRRAIQSTRKGCRVPNISFGVASQRPVENPAKCPGPQAYDPENLRRAVSACKASPIRSVKFGTGPQRYNVDDSGKSPGPNAAYVIPSTMG-RQSNSMFESVKASSFGPPPKRSSQGPAPNIGPGPADYHPTFTNMPRTTHPLSFGGATSNTKGGGVRGTTQRSNSPGPGAYQIGSSLGVQTSSKYKSSTAPSFRSR 1611
MNIGTGPEA FRDGCLSLRA+TLDK+RA QSPGFSGQ+PNGLG+QPLS++RT PVVGWGHYTDG+ DKGRPVE+L GKNTPGPQY+LDK+TCGQQVQSRF+TAPTPVFGSSQRPPLNGEGCVSPGPMTA VNV+AQPPGPKYSMAGAPWR + K A KSPGPG Y VYG+LGEQKESTR SFKGF GGSGV RDMALP+R VPGPGHY+W EKD P QPGGKFGQA Q RP R + RPAPGQY+IPSTLGT DSRFRTVVAPGFG+PP D QRPHSAAGRLG GPGPG+YDVGRVDSLAV KKPLSTE+SCLSF IKPPT+ +P RERK++ELDPESLRRAI+STRKGCRVPN+SFGV QRPV+NP KCPGPQAYDPENLRRAVSACK+SP R VKFGTGPQR+N +S KSPGPNA Y IPST+G +Q+NSMFESVK SSFGPPP RSS+ P + PGP+DY+PT +NM +TTH LSFGGAT N+KGGG RG +RS+SPGPGAY IGS LGVQTSSKY SST PSFR+R
Sbjct: 1 MNIGTGPEADFRDGCLSLRASTLDKIRASQSPGFSGQVPNGLGRQPLSNFRTQPVVGWGHYTDGINDKGRPVETLNGKNTPGPQYELDKVTCGQQVQSRFKTAPTPVFGSSQRPPLNGEGCVSPGPMTATVNVSAQPPGPKYSMAGAPWRKKTK-APKSPGPGQYNVYGSLGEQKESTRTSFKGFGFGGSGVARDMALPSRKVPGPGHYSWHEKDRPSQPGGKFGQAPQ-RPQTRGDLRPAPGQYSIPSTLGTTMDSRFRTVVAPGFGTPPPIDEQRPHSAAGRLGGGPGPGAYDVGRVDSLAVQKKPLSTEKSCLSFQIKPPTSVKPNVSRERKMQELDPESLRRAIKSTRKGCRVPNVSFGVGPQRPVDNPGKCPGPQAYDPENLRRAVSACKSSPTRGVKFGTGPQRHNTAESDKSPGPNAGYFIPSTLGAQQTNSMFESVKTSSFGPPPNRSSRRNTPVVTPGPSDYNPTSSNMAQTTHALSFGGATPNSKGGGARGMPRRSSSPGPGAYSIGSGLGVQTSSKYPSSTGPSFRAR 537
BLAST of mRNA_P-fluviatile_contig12.1438.1 vs. uniprot
Match: A0A485KFJ8_9STRA (Aste57867_3477 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KFJ8_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 3.260e-5 Identity = 47/131 (35.88%), Postives = 63/131 (48.09%), Query Frame = 1
Query: 265 KLTCGQQVQSRFQTAPTPVFGSSQRPPLNGEGCVSPGPMTAVVNVNAQPP-------GPKYSMAGAPW---RNERKRAEKSPGPGDYRVYGALGEQKESTRPSFKGFILGGSGVTRDMALPTRYVPGPGHY 627
K +CG+QV SR +TAPTP+FG+S RP G+G SPGP V P P S+AG ++ K A PGPGDY + + E P F G ++ + ++ VPGPG Y
Sbjct: 42 KSSCGEQVDSRKRTAPTPIFGTSSRPKDPGDGSKSPGPGAYQVPSAISRPVLSTMVTAPACSIAGREKFGSTSDLKSAANCPGPGDYTPH--IVNPNEPIAPQFSL----GKKWSKSLDGQSK-VPGPGAY 165 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1438.1 >prot_P-fluviatile_contig12.1438.1 ID=prot_P-fluviatile_contig12.1438.1|Name=mRNA_P-fluviatile_contig12.1438.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=538bp MNIGTGPEASFRDGCLSLRAATLDKMRAPQSPGFSGQIPNGLGKQPLSSYback to top mRNA from alignment at P-fluviatile_contig12:1670798..1684324+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1438.1 ID=mRNA_P-fluviatile_contig12.1438.1|Name=mRNA_P-fluviatile_contig12.1438.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13527bp|location=Sequence derived from alignment at P-fluviatile_contig12:1670798..1684324+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:1670798..1684324+ >mRNA_P-fluviatile_contig12.1438.1 ID=mRNA_P-fluviatile_contig12.1438.1|Name=mRNA_P-fluviatile_contig12.1438.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3228bp|location=Sequence derived from alignment at P-fluviatile_contig12:1670798..1684324+ (Porterinema fluviatile SAG_2381)back to top |