mRNA_P-fluviatile_contig84.14880.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig84.14880.1
Unique NamemRNA_P-fluviatile_contig84.14880.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A6H5L5I7_9PHAE (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I7_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 4.380e-149
Identity = 243/349 (69.63%), Postives = 273/349 (78.22%), Query Frame = 3 
Query:  330 EGILVDDKGRPYNLGPKGFVRDLNTRAVKIARRVVKKQQQQRDYVGDNSISPAKSSCGKIRETFTSSRSSAGAAIXXXXXXXXXXXXXXXXXXXXXAADQGTSGTVRSGLALEIQFVLSGRLPFVKRSEPLVWLWVCVSIMLVVRYGVLAAGVAPTVGAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWIALFLTLMALDTLLASRLLSAVF 1376
            E +L+D+KGRPYNLGP+GFVRDLNTRAVKIARRV ++ Q                         +++                XXXXXXXXXX   AAD+ TSGTVRS +A EIQFVL GRLPFVKR E LVW +VC+S+  ++RYG+   GVAPTVGAFA+MY VLDF+SGVLHV+LDD+  M+VPLLSQPAMEFQ+HHHIPDDGCSRPFVEGMGDLN I+GLHLALF ALFV+GG +D MLL AGGWKM+LAYWGIWNHRQ AHQLKSKRP+WCTYLQN GIMLSPAAHKVHHTPPHDDEYCLLGVTTW VTWLGR NLG+ FWIALFL L ALDT+ ASRLLS VF
Sbjct:   44 EEVLIDNKGRPYNLGPRGFVRDLNTRAVKIARRVAQQSQXXXXXXXXXXXXXXXXXXXXXXXXXSTNX---------------XXXXXXXXXXTAVAADKSTSGTVRSPIAQEIQFVLGGRLPFVKRIETLVWGYVCLSMFFLIRYGIFECGVAPTVGAFAVMYFVLDFYSGVLHVVLDDDWNMKVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQ-AHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTVCASRLLSMVF 376
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: D7FL42_ECTSI (Lipid_desat domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL42_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 4.590e-136
Identity = 204/253 (80.63%), Postives = 223/253 (88.14%), Query Frame = 3 
Query:  618 AADQGTSGTVRSGLALEIQFVLSGRLPFVKRSEPLVWLWVCVSIMLVVRYGVLAAGVAPTVGAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWIALFLTLMALDTLLASRLLSAVF 1376
            AAD+ TSGTVRS +A EIQFVL GRLPFVKR E LV  +VCVS+  ++RYG+L  GVAPTVGAFA+MY VLDF+SGVLHV+LDD+  M VPLLSQPAMEFQ+HHHIPDDGCSRPFVEGMGDLN I+GLHLALF ALFV+GG +D MLL AGGWKM+LAYWGIWNHRQ AHQLKSKRP+WCTYLQN GIMLSPAAHKVHHTPPHDDEYCLLGVTTW VTWLGR NLG+ FWIALFL L ALDT+ ASRLLS VF
Sbjct:   20 AADKSTSGTVRSSIAQEIQFVLGGRLPFVKRIETLVRGYVCVSMFFLIRYGILECGVAPTVGAFAVMYFVLDFYSGVLHVVLDDDWNMNVPLLSQPAMEFQYHHHIPDDGCSRPFVEGMGDLNFIVGLHLALFTALFVRGGSQDFMLLTAGGWKMVLAYWGIWNHRQ-AHQLKSKRPRWCTYLQNNGIMLSPAAHKVHHTPPHDDEYCLLGVTTWPVTWLGRRNLGSIFWIALFLGLTALDTICASRLLSMVF 271
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A6U5EGY9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EGY9_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.290e-31
Identity = 76/213 (35.68%), Postives = 121/213 (56.81%), Query Frame = 3 
Query:  708 RSEPLVWLWVCVSIMLVVRYGVLAAGVAPTVGAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCE--DGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWIALFLTLMALD 1340
            RS   V+ ++ +++ ++V YG+    +  T  +   +++  D +SGVLHV+ D    +R+P+L QP +EFQ+HH IPDD   + FV+  GDLN +  +   ++  L      E   G  L   G K+ + Y+G ++HR  AH      P+   +LQ +G+M+SP AH  HH PPHD ++CL+GV   +V  + R+ L    W+A+FLT   LD
Sbjct:  112 RSAYAVFSYLLITLAMIV-YGMSQISLFATSLSLLTIFLGYDLYSGVLHVVFDHPDNIRLPVLGQPCLEFQWHHKIPDDLVRKDFVDVCGDLNTVALILFFVYGYLLFGPHREGVSGAALVLAGSKLWMGYFGQFSHRS-AHSYGKHCPRLAAWLQKRGLMISPRAHLSHHKPPHDTDFCLIGVCNPIVAAMRRVTLNRHAWLAVFLTWSVLD 322
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A8J2S8L3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8L3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.540e-30
Identity = 86/204 (42.16%), Postives = 112/204 (54.90%), Query Frame = 3 
Query:  789 APTVGAFA----LMYIVLDFFSGVLHVLLDDEACM---RVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWI--ALFLTLMALDTLLASRLLSAV 1373
            AP++ AF      MY+  DF+SGVLHV LDD   M   +  +L Q  +EFQ+HH IP DG S+PF+    DLN+I+ + + L   L    G   G   A  G K+  AY+G + HR  AH  KSKRPQW  +LQ+ G M   A H  HH PPHD+ +CL+G     V  L +L  GT  W+   L+L L   D  L  R L+ V
Sbjct:  102 APSLRAFLWMLPAMYLGYDFYSGVLHVALDDPKNMQGVKSYILFQGCLEFQWHHAIPYDGASKPFIACCADLNIIVLILMVLNCGLL---GYTSGTRAALTGLKLFFAYFGQYCHRA-AHTPKSKRPQWVQFLQSTGFMTPQAKHNGHHRPPHDENFCLIGKMDPAVNGLIKLC-GTNDWVWFGLWLGLSCCDVALVHRGLACV 300
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A7S3LC45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LC45_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.160e-27
Identity = 66/175 (37.71%), Postives = 99/175 (56.57%), Query Frame = 3 
Query:  816 MYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWIALFLTLMALD 1340
            M++  DF+SGVLHV+LD    + +P+L QP +EFQ+HH IPDD   + FV+  GDLNV++ +  A+   L        G+ +  GG K+ +AY+G ++H+  AH     R  + T+LQ  G M+S   H  HH PP+D ++CL+G     +  L  L      W++LF     LD
Sbjct:  153 MFLGYDFYSGVLHVVLDHPDNIALPILGQPCLEFQWHHAIPDDLVRKDFVDVCGDLNVVVMILAAINLYLL---DLNSGVAMVIGGLKLWMAYFGQFSHKS-AHAFGPARGGFATWLQKYGFMISCKDHMSHHKPPYDVDFCLIGFCNPAIDALRSLTTNNAAWLSLFFVWSILD 323
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A7Y2FPK9_9DELT (Lipid_desat domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2FPK9_9DELT)

HSP 1 Score: 100 bits (248), Expect = 1.560e-19
Identity = 71/218 (32.57%), Postives = 109/218 (50.00%), Query Frame = 3 
Query:  699 FVKRSEPLVWLWVCVSIMLVVRYGVL-AAGVAPTVGAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAY-WGIWNH--RQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPFWIALFLTLMALD 1340
            +VKR +P+V + + + I     YG+   +     +  F + Y  +DF+SGVLHV+LD+   +R+PL+  P +EFQ+HH  P D  +R   +  GDLNV++   L   A LF   G      + AG     + Y WG  N    + AH     RP+   ++Q   +++ PA H VHH         L G +  L+  + R+     FW+ LF+ L ALD
Sbjct:   57 YVKRFKPMVLVVLALCI-----YGIAQTSNPIALLATFVVFYFYIDFYSGVLHVVLDNPRFVRLPLIGVPCVEFQWHHTFPYDISTRRLFDVWGDLNVLL---LVKSAFLFGICGFSTTTFMVAG-----VGYAWGYANQFSHRLAHTAPRNRPKLAVWMQEHRLLMPPAVHHVHHNDHTQAFPVLSGHSRGLIQGMLRVIPNGYFWLVLFVVLTALD 261
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A7S3PX68_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX68_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.680e-19
Identity = 51/150 (34.00%), Postives = 80/150 (53.33%), Query Frame = 3 
Query:  831 DFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLAL-FAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWL 1277
            D  SG LH++ DD   + +P+L QP +EFQ HHH P D   R  ++ +GDLN + G+   L     F      +       G K+ +AY+G ++HR  AH   S   ++   L+  G M+    H+ HH PPHD ++CL+G+   L+ ++
Sbjct:  101 DILSGFLHIVFDDTRNLCLPVLGQPCLEFQMHHHFPYDLVKRDLLDVLGDLNTVTGILAVLNICPYFFCDPWNNTTHRFMLGMKLFMAYYGQFSHRS-AHTPSSVHNKYIEALRKIGFMIPLDVHRSHHRPPHDKDFCLVGICNPLINFM 249
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A4D9CTS2_9STRA (Lipid_desat domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTS2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 5.070e-19
Identity = 73/222 (32.88%), Postives = 112/222 (50.45%), Query Frame = 3 
Query:  669 IQFVLSGRLPFVKRSEPLVWLWVCVSIMLVVRYGVLAA-GVAPTVGAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGRLNLGTPF-WIALFLTL 1328
            +Q V  G   F  R  PL++++   ++     YG+L    +A  +GAF L Y+ +D +  VLH++LD+   +++PL+ +  +EFQFHH IP +   R F     DLN IIGL   +   LF   G  D          +L AY G   HRQ AH    KR      LQ+ G+M++P  H+ HH         L G +   VT+L +  + + + W+A+F+ L
Sbjct:   70 LQMVKQGATVFKHRIWPLMYIYWAYTV-----YGILTGPSLAFALGAFVLTYLYIDLYGAVLHIVLDNPNFLKLPLIGEACLEFQFHHIIPHEITVREFRHIAADLNGIIGLEYGVNLILF--NGLTDPAYRCVACCAVLNAYLGQLAHRQ-AHMRPEKRDAVVAVLQDLGLMVTPDTHRRHHKTYDQGFPILSGWSDAPVTFLYQYVVPSQWVWLAMFVLL 283
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: A0A5F1XTR2_9LEPT (Kua-ubiquitin conjugating enzyme hybrid localization domain protein n=4 Tax=Leptospira TaxID=171 RepID=A0A5F1XTR2_9LEPT)

HSP 1 Score: 69.3 bits (168), Expect = 2.550e-9
Identity = 51/148 (34.46%), Postives = 71/148 (47.97%), Query Frame = 3 
Query:  831 DFFSGVLHVLLDDEACMRVPLLSQPAMEFQFH-HHIPDDGCSR-PFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWGIWNHRQQAHQLKSKRPQ-WCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWL 1265
            DF SG++H L D       P+   PA  F F  HH+   G +R  F+E  G+ N ++ L + ++   F +       L+A   W  LL  WGI+   Q         P  +   LQ   ++L PA HKVHHTPPHD  +C+   T WL
Sbjct:   68 DFISGLVHFLGDSVGSETTPIFG-PAFIFPFRDHHVDPKGITRHDFIETNGN-NCLVSLPILVYYVFFWESEGVVSSLIALF-WFFLL--WGIFATNQIHKWAHQDSPNAFIKTLQKYKLILGPAHHKVHHTPPHDTYFCI--TTGWL 208
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BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Match: H8MNW2_CORCM (Carotenoid synthesis regulator CarF n=33 Tax=Myxococcaceae TaxID=31 RepID=H8MNW2_CORCM)

HSP 1 Score: 58.5 bits (140), Expect = 1.790e-5
Identity = 45/165 (27.27%), Postives = 70/165 (42.42%), Query Frame = 3 
Query:  804 AFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGCSR-PFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGG----WKMLLAYWGIWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLGVTTWLVTWLGR 1283
            A  L Y+  DF SG +H + D      +P+L +  +     HH+ +   +R  FVE  G+ N ++ L +A  A      G     L A  G    W M    +  W+H  +        P    +LQ   ++L P  H++HHT P +  YC+       V W+ R
Sbjct:   63 AVVLGYLAADFVSGFVHWMGDTWGSTEMPILGKAFIRPFREHHVDEKAITRHDFVETNGN-NCLVSLPVAALAVAIPLAGPGWVFLAAFLGAMIFWVMATNQFHKWSHLDEP-------PAIINFLQRVHLILPPDHHRIHHTAPFNQYYCIT------VGWMNR 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig84.14880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L5I7_9PHAE4.380e-14969.63Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
D7FL42_ECTSI4.590e-13680.63Lipid_desat domain-containing protein n=1 Tax=Ecto... [more]
A0A6U5EGY9_9STRA3.290e-3135.68Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J2S8L3_9STRA2.540e-3042.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3LC45_9STRA3.160e-2737.71Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7Y2FPK9_9DELT1.560e-1932.57Lipid_desat domain-containing protein n=1 Tax=Myxo... [more]
A0A7S3PX68_9STRA1.680e-1934.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9CTS2_9STRA5.070e-1932.88Lipid_desat domain-containing protein n=2 Tax=Mono... [more]
A0A5F1XTR2_9LEPT2.550e-934.46Kua-ubiquitin conjugating enzyme hybrid localizati... [more]
H8MNW2_CORCM1.790e-527.27Carotenoid synthesis regulator CarF n=33 Tax=Myxoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig84contigP-fluviatile_contig84:314511..321024 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score420.2
Seed ortholog evalue1e-114
Seed eggNOG ortholog2880.D7FL42
Preferred nameTMEM189
KEGG koko:K10704,ko:K20656
KEGG Pathwayko04624,map04624
GOsGO:0000151,GO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016491,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0031224,GO:0031371,GO:0031625,GO:0032446,GO:0032991,GO:0035370,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0055114,GO:0061630,GO:0061659,GO:0070534,GO:0070647,GO:0071704,GO:0080132,GO:0140096,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.protein ubiquitination
EggNOG OGsKOG3011@1,KOG3011@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionB-domain containing protein Kua
Ec32 orthologEc-05_006720.1
Exons3
Model size2713
Cds size1182
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig84.14880.1prot_P-fluviatile_contig84.14880.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig84 314711..319693 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817291.0710008-UTR-P-fluviatile_contig84:314510..3147101622817291.0710008-UTR-P-fluviatile_contig84:314510..314710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 314511..314710 +
1693571959.862246-UTR-P-fluviatile_contig84:314510..3147101693571959.862246-UTR-P-fluviatile_contig84:314510..314710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 314511..314710 +
1622817291.1135476-UTR-P-fluviatile_contig84:319693..3210241622817291.1135476-UTR-P-fluviatile_contig84:319693..321024Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 319694..321024 +
1693571959.897228-UTR-P-fluviatile_contig84:319693..3210241693571959.897228-UTR-P-fluviatile_contig84:319693..321024Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 319694..321024 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817291.083416-CDS-P-fluviatile_contig84:314710..3156281622817291.083416-CDS-P-fluviatile_contig84:314710..315628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 314711..315628 +
1693571959.8737586-CDS-P-fluviatile_contig84:314710..3156281693571959.8737586-CDS-P-fluviatile_contig84:314710..315628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 314711..315628 +
1622817291.094214-CDS-P-fluviatile_contig84:317917..3180041622817291.094214-CDS-P-fluviatile_contig84:317917..318004Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 317918..318004 +
1693571959.8818762-CDS-P-fluviatile_contig84:317917..3180041693571959.8818762-CDS-P-fluviatile_contig84:317917..318004Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 317918..318004 +
1622817291.1038527-CDS-P-fluviatile_contig84:319516..3196931622817291.1038527-CDS-P-fluviatile_contig84:319516..319693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 319517..319693 +
1693571959.8895195-CDS-P-fluviatile_contig84:319516..3196931693571959.8895195-CDS-P-fluviatile_contig84:319516..319693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 319517..319693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig84.14880.1

>prot_P-fluviatile_contig84.14880.1 ID=prot_P-fluviatile_contig84.14880.1|Name=mRNA_P-fluviatile_contig84.14880.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=394bp
MPPQSAPLLDAGSLARQQVAVSSTRRGCNTTSGPPPWQQQREEEGILVDD
KGRPYNLGPKGFVRDLNTRAVKIARRVVKKQQQQRDYVGDNSISPAKSSC
GKIRETFTSSRSSAGAAIAAATGGVEAADAAALVAAAAVAADQGTSGTVR
SGLALEIQFVLSGRLPFVKRSEPLVWLWVCVSIMLVVRYGVLAAGVAPTV
GAFALMYIVLDFFSGVLHVLLDDEACMRVPLLSQPAMEFQFHHHIPDDGC
SRPFVEGMGDLNVIIGLHLALFAALFVKGGCEDGMLLAAGGWKMLLAYWG
IWNHRQQAHQLKSKRPQWCTYLQNKGIMLSPAAHKVHHTPPHDDEYCLLG
VTTWLVTWLGRLNLGTPFWIALFLTLMALDTLLASRLLSAVFF*
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mRNA from alignment at P-fluviatile_contig84:314511..321024+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig84.14880.1 ID=mRNA_P-fluviatile_contig84.14880.1|Name=mRNA_P-fluviatile_contig84.14880.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6514bp|location=Sequence derived from alignment at P-fluviatile_contig84:314511..321024+ (Porterinema fluviatile SAG_2381)
GTCAAGCCAATCCCAAAACTGTTCCTGCTCCGCGAACAGCGCCAAGCTGG
GTGTATTCGTACGAACGCATCAGCAGTGAACTCCATATTCAGCGTTCAGC
CAGCTGACCGCGGTCGTGATTGCACACAATTGACAACCCATCCTCCTTAC
TGCAGCGAACCCTTCGGTCCGGCCGTACATCCGACCCACTTTCCCTATCT
ATGCCACCTCAGTCTGCTCCGCTGCTGGATGCAGGTTCACTCGCGCGACA
ACAAGTTGCTGTCTCGAGCACAAGGCGCGGTTGTAATACAACAAGCGGGC
CGCCGCCCTGGCAGCAGCAGCGGGAGGAGGAGGGGATTCTTGTCGACGAC
AAGGGCCGACCCTACAACCTGGGCCCCAAGGGCTTCGTGCGTGATCTCAA
CACGAGAGCCGTGAAGATCGCGCGGAGAGTTGTGAAGAAGCAGCAGCAGC
AAAGAGATTATGTCGGCGACAACAGCATCAGTCCTGCGAAAAGCTCGTGC
GGCAAGATAAGGGAAACATTTACATCATCACGGTCATCCGCAGGCGCAGC
AATAGCAGCCGCTACAGGAGGTGTGGAAGCAGCGGACGCCGCGGCGCTGG
TCGCAGCCGCCGCCGTGGCCGCCGACCAGGGCACCAGCGGGACCGTGCGC
AGCGGACTGGCGCTGGAGATACAGTTCGTCCTGTCAGGGAGGCTCCCGTT
CGTGAAGCGCTCGGAGCCCCTGGTGTGGCTGTGGGTGTGCGTGTCCATCA
TGCTGGTCGTCCGCTACGGAGTCCTAGCCGCCGGGGTCGCGCCAACGGTG
GGCGCGTTCGCGTTGATGTACATCGTGCTGGACTTCTTCTCCGGGGTGCT
GCACGTGTTGCTAGACGACGAAGCGTGTATGAGGGTGCCGCTGTTGTCGC
AGCCGGCGATGGAATTCCAATTTCACCATCACATACCCGATGATGGCTGC
TCGAGGCCCTTCGTGGAGGGCATGGGAGACCTGAACGTCATCATCGGGCT
TCACCTGGCGCTTTTCGCCGCGCTATTCGTGAAGGGCGGATGCGAGGACG
GCATGCTGCTCGCCGCCGGGGGCTGGAAGATGCTGCTGGCGTACTGGGGG
ATCTGGAACCATCGCCAGGTTTGAAAATAGAGTCAACAGGTTCTCCGTGT
GCAACTGCTACATATATTTGGTTGCGTGCGTTCAGCGCGAAACTCAGGCG
GAGGGGAGGAAGACAGAGGTCGTGGTCCAATAGCAGTCCGGGAGGGCACC
GAATCTCTCCTATTTGTTCTCAGCATGAGGTAAACTACAGTGGGGAAGGG
ATTATCAGCACCACAACGTGTGTAAGAGGTCGTCGGACCTCGAGCACTTG
ATGAAAAAAAACATTTATTTGAGAAAATCATTCGAAACGACCGGGGATGC
GCGTGTACGTGGGTGTTCGTCCCATTTTTTGTGTTGATGCTCTAGACATC
ACCTTGCGGTGTTATGTTTCGACCGACCAACCGGTGTAACGTAGGAGGAA
GGACACGCAGGAGCTTTTGGATTTTGTTTTCGTTTTGAGCCCCAACCTTC
CACCTGCGGTGCTCGCCGTCGTTGTAAGAAGCGTTCTGCGAGGCTCTACG
CGATAGATTAGTGTACACACGATGTCTGGGTCGCTTTCCACGGTGGCCAG
GCTATTCCGACATGATCGAAGTCTCCCTCCACAGGATTCCAACCCCGAAC
CTGAGCTTTCACAATTGCGTGTGGAAATTCAACGAGTGGCAGCCCCAGGC
GTTGGCATGCTGTGCTGCTTCATGTATCTGCATCTGAACTAGTTTCCGAC
GCCGTTCATGGACCCTAAACACAGCAGTCAGTTGTCCTCTGTATCAAATA
TCCTGTACCGAAACCGTTTCTCGTACGCTTTTTACTTCTCTGGGGTCCCG
AATCAAACTGCGCCGGTACTCACATGTGTTTGTTGAACCTGGAAACCTCC
TTCTTCCTCTATGTTAGAAAGCCAGACGACTGTTGGAATCCAATGGGAAT
ATTCGTCGAAATGCTTAATTATATGTATTCTGTCTGTCAGGAAATGTCAG
GACGAGCACACTTCGTCCATTGCGAACAGCTGTGTCGCCCTCGTGGACTA
CGTCTCCTCTTCTGTTCTTTTTTCAAATATTGCACTTTCACCTTTATTCA
GGTGTATCAAAACATGAGACACCACATTCCTCACGAGGAACAAATCATCG
AAACACGAAGGATAGATCTAATCTTGTATTCGACTACGAAGCATGCACGT
ATTCAACTTCTGTACCAGTTTCGCCTGGCTGCGTGTGTGCCCCCCACCCC
TCTCGGCTGACTGCAATTCCTCTCGGGCGTTACAATGCAGTTCTCCCCGA
ACACAAAACGGATGATATTCGACACGCGAAGGGCTTTTTCGATTTTCAAG
AAGGAATGAGCACCGAGGAAGATATGCCAACACACAGCGAATGTGGCTAA
TTGTGTCCACAGAGCAAAGGATGAATCAATGCTCTGAAACACATGGTACG
TTTGTAGGCAGCACCTTCACGGAAGGACTTCCCTCAAGAGACATGGGTCA
CAGAGCCCCGGTACAACAGGACTCGCCTCGAGAGGAAGGAGTCACGAAGC
TCCGGCCGGGTACTTAATGTGCAGCAGAAATTGTTTTCTATCCCTGTCTT
TTCTTCAATTTCCCTTGAATTTGATGAGGGCGTGGCGGGAGCGCGAAATG
GTGGCGTTTGAGAACCGCTTGGCATGATCTCTCAACGCTTCGCAACCCAC
AGAATCTGTGCACCCCAGTGCTGCAGTGCGTCCGCCCTCGACGACGACGT
TCAAGATATTAAAGAAGCACCTCTATGAACTCAACTGTTCCGACTGCTGA
AAGTAATGAATCTCCGAACATGCTTCGCGGGAAAACATGTACCTCTGCTG
TCATCACATCAAGCAGGGTATTCTTTTTAGGTTTTCAGCAAAGAAAGCAT
GGAAACATTAACAACCATCCATTAAATTCAGCGGCAAAATCTGTACCAGT
GCAATCTCTGTGAAAACAACAAAAGGACAGTCGATTCCCCGCCTCACTGG
TTCTTTTTAGAAAAAATCGAAAAACATGAGTCTGTTGTGACCACAGCTAA
TTACACAAAAGGTTTTGAACAGAACATCAGAGAGCACCCTTTTTTTCTCA
CAGCTCGTCTCCCTCGCGCCTTGTTTCCGTTTTGAGGCTTTCTCTGAAGA
GCAAAACATGCGGCCGCCTTGATGAAGCGTACGGCGGTGCATCACCCGAA
CTACTTTATTTTCATGTTTTTGAGCCGCAAGAAACTGGAAAAAGACTACA
ACAGTGCAACAGGTAATACTTTCCTTTCTCCCGTCACGGCCTGCTCCTCT
CCGTCCACTCTTTTCTGTTGTATTGGCTTGTTTGGCCTTCCTTCTCCTCC
CCTCGAGCAGGCACACCAGCTCAAGAGCAAACGGCCGCAATGGTGCACCT
ACCTCCAGAACAAGGGCATCATGCTCTCACCGGCGGCGCACAAGGTACCA
CTAGTTATAATAACAGTTTAGACAAGAACCAATCCTGCTTATTCTCCCCG
ATCCCACCACTCCCCTTTCATCATTTTCTTCTTGCTCCAACACCCTCCCG
TTTTCGCCATAATTTTCATGCTCTAATCCCACCACCCTCCTTTCATCATT
TTCTTCGAGCTCCTGCTACCCCCTCCCCCATTCCGCTATATTTTTCATGT
TCCAACCCAACAGCCTCCTCGTTCATCATTGTCGCCCCGGTGGGTAATCT
TGAAAAATTACTCTCACCAAGGTCTTGAGTTCGAATCCTGATGATGATGG
AAAATTTGTATCATTGGGGTTGGACACGGAAAATTCTCAAAAGCTCGCGA
GTAGACTAGATTCGACTACACTCGATGAGGGAATGGAGCGGCTGAACCCG
TCTCGCGACAAGGAATGAAGCATGCACCGCAGAAGGGAGGTAGGGCAAAA
CAGGCCAAGAAAAAATCTCCTCTAGTTACACCCCCTCCTGTGTGACCCCG
GCTGATTGTAGTTGTACGACAAAAACACACTGAACGAGTGTATTACACTA
CGTACACCGAAACGAGTAGAGTACATTTTTACCAAAACGTGGCAACACTC
GCCAGAATAAATTTGACGAAAACACACATAACACAACCCCACCTGCCCCC
TTCCATATTATTTTCGGTATTTTTCGCGCTCCAGGTGCCCGCCCTTCCCC
TCGCCGCCGCCGCGATTTTTCTCGTGTTCCAAGCCTTACCCTAACTCGGT
TCATCATTTTCTTCGCGCTCCTGCTACCCCCCCTCCCGCCCCCGACTTCT
GCTATACTTTTCGTTTTCCAACCCCACCACCACCCCTTTCATCATTGTCG
TCGCCCTCTTGCTCCCCCCACCCACCGACGCTCTCGAAAGAGATGCAGCG
GCCCAATGGCGCGGCAAGGGGATGGGTTGGGGTTGGCGATGGCTCCGTGA
ACCATTCTGCTCATTGTACAAGCTAGGCAACCACGGTACCGTTTTACTTT
TCATTGTTATTTTCTCAGCGGTAACCATGATGGTGTTCAACCATGGTTGC
AGGGTTGAGAATCAGCTCCGCACTTATGGCATGGTCGTACCACACAGCGA
TGAAATGGTGATGCACAGACGAGCCACTGCCGGAGAACCGTCCAATGGCT
GTCGCTGGGGCGATGCCCAAAAAAAAAAGCAGCTTATTGAGGATGTCATC
CGTGTGCAAGATCAGTAAGCCGTTGGCCGAACATTTGTAGTAGGATGCTG
CCCACCCATCATGCGACTCGCCGAATGCATCACGGCGCTTCGCCTTTGTT
CGGTGAATCCAAGAGCCTGGGCCGATGAAAACCCGGCGAATCACTGCGTC
GCGGCCTAGTAGGGATGCGCGGTTTTCCGCCTAAGGCTTGATTGAGGCAT
GAGTGAAATGAGTCCATCCCCCCCCTTCCCGTTATTATTGTTTCTCCAAC
CCCACTATTCTCCCTTGTTTTCGCATATTGGTCATTTGTAATCCCGAATA
AACCAGGTGCACCATACCCCACCACACGACGACGAGTACTGCCTCCTCGG
GGTCACGACCTGGTTGGTGACTTGGCTCGGCCGCCTCAACCTTGGGACAC
CCTTCTGGATCGCTCTGTTCCTGACGCTGATGGCTCTGGATACACTCCTC
GCGTCGCGGCTTCTCTCAGCCGTTTTCTTCTGAAAAAAAAAGCAACGCGA
TTTGATTGGTCGAGAGCGAGACACGTGAAAAAATGATAGTTTCTCGGTCC
AATGAGAGTCCAGCCGAGGACAAGACAACCCAAGACGACACCGTCGATTT
GATTGGTGGAGAGAGTCCAGCTGGGATGCAAACTCCGCAGCCGACGATAA
GCGAGGCTATTCGGGCGTCGGGTGGCTACGAGCAGCAGGGGCGACAAGGA
GGAGGAGGGGGCGAGGTGCAGGCCAAGAAGCCTGGCGCCCTTGGCGAAGC
TTGTGATGCTCGACCGATTTTCATGGTCGAGATCAGCACGCAAATAGTTC
AGCACGGCCTGCCTTGCTGGCCACGGATCGACGAGTCTCAGGGGCTTTTT
TTCAAGGCTGGGGTGGAAGTGGGCCATCGGGGGGCCGCGGTGTGGTTTCG
GGGCAGACCGAGATCCAGAAAGAGATGACAGGCTAGTTTTCCAGATGAGG
GCCAGGCGATGAGTCCGAGGGGGCTCTGGGACTGCAGGGCTCGGGTTGGG
GATGCCATCTCGAGTTTGGAGGGGGGTCGGATCGAGCAGGCAGGTTAGAT
GCCGGAGAGCGCCAGTCGGAAAGACCGAGGGGGTTTCAGGGGTTGCAAGA
TTTGGACAGGGGGTTGCATCAGGGGAGGAAGAGGGGCGGTGTGGTCCGAG
TAGGCAAGCCGGATCCTGTCAAGTGCTCGACCGAAGACCGAGGGGTTCAG
GGACTGTAAGGCTTGGGTAGCGGATGGCCTCACGAGAGGAAGCGGGGCGG
CGGGGATCGAGCAGGAAGTCTTCGCGGAAGAAAGTACAGCCTATCGGGAG
TGATCCAGGGGACCTCACCTTTCATTTCTTGGCGACAAGCGGCAGTCGCA
GCTGCTAATATCGGCTGGTTGAGAGACAAGTGAGTCTTTTTTTTGTGGAA
CGCGACTGCCTTTTGTGGCGTGAGCGGTGAAGGGAAGGTTGAAAGAAGTC
AAGGCTCATTTTCAGCGGTAAGGACGTGTGTTGTTCAAGGTGTGATCGAG
CTCAAGGGCCGTTCCGCGGCGGACAAGCCATAGTAGAATCAAGCGAGGGG
TAATTGGGATAATGTGGTGTGGTGAGCGTGTTTCTCATTCTTTTGTTGCT
GCCCAAAACTTGTTCCGTCAACGCGTTGTTGATCTGCTGTAAATTAAGCT
GTCACTTCTCAAAGCTCTACTTTGGAAAACATGATGTGGAGTATTTTCTG
CGTTTTTATGTGGTGATTCTAACGGTGATCCAGGAGTTCATTCAATTTTT
TTTCAGTAGTACGGTCTCCGCCAATTGATTTGTCGTTATCGAGTTGTTCT
CGGCCCGGAGTTCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig84:314511..321024+

>mRNA_P-fluviatile_contig84.14880.1 ID=mRNA_P-fluviatile_contig84.14880.1|Name=mRNA_P-fluviatile_contig84.14880.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2364bp|location=Sequence derived from alignment at P-fluviatile_contig84:314511..321024+ (Porterinema fluviatile SAG_2381)
ATGCCACCTCAGTCTGCTCCGCTGCTGGATGCAGGTTCACTCGCGCGACA
ACAAGTTGCTGTCTCGAGCACAAGGCGCGGTTGTAATACAACAAGCGGGC
CGCCGCCCTGGCAGCAGCAGCGGGAGGAGGAGGGGATTCTTGTCGACGAC
AAGGGCCGACCCTACAACCTGGGCCCCAAGGGCTTCGTGCGTGATCTCAA
CACGAGAGCCGTGAAGATCGCGCGGAGAGTTGTGAAGAAGCAGCAGCAGC
AAAGAGATTATGTCGGCGACAACAGCATCAGTCCTGCGAAAAGCTCGTGC
GGCAAGATAAGGGAAACATTTACATCATCACGGTCATCCGCAGGCGCAGC
AATAGCAGCCGCTACAGGAGGTGTGGAAGCAGCGGACGCCGCGGCGCTGG
TCGCAGCCGCCGCCGTGGCCGCCGACCAGGGCACCAGCGGGACCGTGCGC
AGCGGACTGGCGCTGGAGATACAGTTCGTCCTGTCAGGGAGGCTCCCGTT
CGTGAAGCGCTCGGAGCCCCTGGTGTGGCTGTGGGTGTGCGTGTCCATCA
TGCTGGTCGTCCGCTACGGAGTCCTAGCCGCCGGGGTCGCGCCAACGGTG
GGCGCGTTCGCGTTGATGTACATCGTGCTGGACTTCTTCTCCGGGGTGCT
GCACGTGTTGCTAGACGACGAAGCGTGTATGAGGGTGCCGCTGTTGTCGC
AGCCGGCGATGGAATTCCAATTTCACCATCACATACCCGATGATGGCTGC
TCGAGGCCCTTCGTGGAGGGCATGGGAGACCTGAACGTCATCATCGGGCT
TCACCTGGCGCTTTTCGCCGCGCTATTCGTGAAGGGCGGATGCGAGGACG
GCATGCTGCTCGCCGCCGGGGGCTGGAAGATGCTGCTGGCGTACTGGGGG
ATCTGGAACCATCGCCAGATGCCACCTCAGTCTGCTCCGCTGCTGGATGC
AGGTTCACTCGCGCGACAACAAGTTGCTGTCTCGAGCACAAGGCGCGGTT
GTAATACAACAAGCGGGCCGCCGCCCTGGCAGCAGCAGCGGGAGGAGGAG
GGGATTCTTGTCGACGACAAGGGCCGACCCTACAACCTGGGCCCCAAGGG
CTTCGTGCGTGATCTCAACACGAGAGCCGTGAAGATCGCGCGGAGAGTTG
TGAAGAAGCAGCAGCAGCAAAGAGATTATGTCGGCGACAACAGCATCAGT
CCTGCGAAAAGCTCGTGCGGCAAGATAAGGGAAACATTTACATCATCACG
GTCATCCGCAGGCGCAGCAATAGCAGCCGCTACAGGAGGTGTGGAAGCAG
CGGACGCCGCGGCGCTGGTCGCAGCCGCCGCCGTGGCCGCCGACCAGGGC
ACCAGCGGGACCGTGCGCAGCGGACTGGCGCTGGAGATACAGTTCGTCCT
GTCAGGGAGGCTCCCGTTCGTGAAGCGCTCGGAGCCCCTGGTGTGGCTGT
GGGTGTGCGTGTCCATCATGCTGGTCGTCCGCTACGGAGTCCTAGCCGCC
GGGGTCGCGCCAACGGTGGGCGCGTTCGCGTTGATGTACATCGTGCTGGA
CTTCTTCTCCGGGGTGCTGCACGTGTTGCTAGACGACGAAGCGTGTATGA
GGGTGCCGCTGTTGTCGCAGCCGGCGATGGAATTCCAATTTCACCATCAC
ATACCCGATGATGGCTGCTCGAGGCCCTTCGTGGAGGGCATGGGAGACCT
GAACGTCATCATCGGGCTTCACCTGGCGCTTTTCGCCGCGCTATTCGTGA
AGGGCGGATGCGAGGACGGCATGCTGCTCGCCGCCGGGGGCTGGAAGATG
CTGCTGGCGTACTGGGGGATCTGGAACCATCGCCAGCAGGCACACCAGCT
CAAGAGCAAACGGCCGCAATGGTGCACCTACCTCCAGAACAAGGGCATCA
TGCTCTCACCGGCGGCGCACAAGCAGGCACACCAGCTCAAGAGCAAACGG
CCGCAATGGTGCACCTACCTCCAGAACAAGGGCATCATGCTCTCACCGGC
GGCGCACAAGGTGCACCATACCCCACCACACGACGACGAGTACTGCCTCC
TCGGGGTCACGACCTGGTTGGTGACTTGGCTCGGCCGCCTCAACCTTGGG
ACACCCTTCTGGATCGCTCTGTTCCTGACGCTGATGGCTCTGGATACACT
CCTCGCGTCGCGGCTTCTCTCAGCCGTTTTCTTCTGAGTGCACCATACCC
CACCACACGACGACGAGTACTGCCTCCTCGGGGTCACGACCTGGTTGGTG
ACTTGGCTCGGCCGCCTCAACCTTGGGACACCCTTCTGGATCGCTCTGTT
CCTGACGCTGATGGCTCTGGATACACTCCTCGCGTCGCGGCTTCTCTCAG
CCGTTTTCTTCTGA
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