mRNA_P-fluviatile_contig83.14864.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-fluviatile_contig83.14864.1
Unique Name	mRNA_P-fluviatile_contig83.14864.1
Type	mRNA
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)

Homology

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KF37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF37_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 4.850e-38
Identity = 99/196 (50.51%), Postives = 121/196 (61.73%), Query Frame = 1

Query:   31 KRTPALSAKAVE-AGIQLGRGESARKKPAEGFVDMVRQRADEVLDAGGEEASA---DDDVVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIVDAKA 606
            KR PA SAKA++ A  ++ R E AR     GF  + +Q A ++   GGEE +A   DDDV  V APAA              S  W    D  LA+ GL+ EVW V GS R+V ERWD CW +LN+EP VR+F  KAS  CK+RYDK+VD QSK +G+A RDSGAGTA+SGS+       +  LDKVLTAIVDAKA
Sbjct:    7 KRRPAPSAKALDLARDEVTRREVARAAGRVGFAALGQQHARDLEAGGGEEQAAGRGDDDVQVVAAPAAKQARVRK-------STKWPPTYDFALARAGLQNEVWIVNGSRRSVGERWDTCWETLNQEPLVRMFKDKASKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKA 195

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 5.100e-38
Identity = 100/196 (51.02%), Postives = 122/196 (62.24%), Query Frame = 1

Query:   31 KRTPALSAKAVE-AGIQLGRGESARKKPAEGFVDMVRQRADEVLDAGGEEASA---DDDVVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIVDAKA 606
            KR PA SAKA++ A  ++ R E AR     GF  + +Q A ++   GGEE +A   DDDV  V APAA              S  W    D+ LA+ GL+ EVWKV GSGR+V ERWD CW +LN EP VR+F  K+S  CK RYDK+VD QSK +G+A RDSGAGTA+SGS+       +  LDKVLTAIVDAKA
Sbjct:    7 KRRPAPSAKALDLARDEVTRREVARAAGRVGFAALGQQHARDLEAGGGEEQAAGRGDDDVQVVAAPAAKQARVRK-------STKWPPTYDLALARAGLQHEVWKVNGSGRSVGERWDACWKTLNREPLVRMFKEKSSSICKHRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKA 195

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KUQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ4_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.880e-33
Identity = 87/197 (44.16%), Postives = 114/197 (57.87%), Query Frame = 1

Query:   16 MSRVSKRTPALSAKAVE-AGIQLGRGESARKKPAEGFVDMVRQRADEVLDAGGEEASAD---DDVVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIV 594
            MS   KR  A SAKA++    ++ + E+AR     GF  + +Q A ++   GGEE +A    DDV    APAA              S  W    D+ LA+ GL+ EVWKV GSGR+V ERWD CW +LN+E  VR+F  K S  CKARYDK++D QSK +G+AQRDSGAGTA+SGS+       +  L + L  +V
Sbjct:    1 MSTRPKRRAAPSAKALDLVRDEVAKREAARAAGRVGFAALGQQHARDLEATGGEEQAAGGDGDDVQVAAAPAAQLARVRK-------STKWPPTFDLALARAGLQNEVWKVNGSGRSVGERWDACWKTLNQESLVRIFKDKTSKNCKARYDKIIDDQSKNDGKAQRDSGAGTAESGSEDEGEKNTKIQLVRGLEPLV 190

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5K0A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A1_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.790e-31
Identity = 90/191 (47.12%), Postives = 113/191 (59.16%), Query Frame = 1

Query:   49 SAKAVE-AGIQLGRGESARKKPAEGFVDMVRQRADEVLDAGGEEASADDD----VVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIVDAKA 606
            SAKA++ A  ++ + E+AR     GF  + +Q A + L+AG             V  V APAA              S  W    D+ LA+ GL+ EVWKV GSGR+V ERWD CW +LN EP VR+F  K+S  CK RYDK+VD QSK +G+A RDSGAGTA+SGS+       +  LDKVLTAIVDAKA
Sbjct:    3 SAKALDLARDEVAKREAARTAGRVGFAALGQQHARD-LEAGXXXXXXXXXXXXXVQVVAAPAAKQARVRT-------STKWPPTYDLALARAGLQHEVWKVNGSGRSVGERWDACWKTLNREPLVRMFKEKSSSICKHRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKA 185

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: D7FZ43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ43_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.860e-30
Identity = 122/336 (36.31%), Postives = 165/336 (49.11%), Query Frame = 2

Query:  716 DAPSPAGGGSASVASRQVPALGDLANDMGAPSITFLSDRTASTRRR----LNLGFTFDLVCAPNAVAMMTVAIGERMLNQRNGQPLDEFIAAGLVEDELREFPGF---GEFVLRKLCDHYSVSDEDFHCLPNSYFSAQGWPLDSSPTAEKMRKLEEQLAELLVLGRVNATIPGPVAAGQGSASGALXXXXXXXXXXXXXXRETSAVXXXXXXKTRTNKNKDIEDGLDGFMERQMASAAKLAADNRQHAEQXXXXXXXXXXXXXXXDEDRRDALRKQEFQDRMAFERSMREDEHKQRMAEQTRXXXEAREDQRLEREHTLAQLKLQIELEKAKSKNS 1702
            D  SPAG GS    SR+VP LG L   MG+ SI  L+     T       L  GFT D V     VAMMTV + +R   QR+G  +++++   L +DE  + PG     E V+  L D Y V    F  LP+S +   G P++   T  K++ + +++A LLVLG    T  G  AAGQ S SG+               R  S        KTR   NK  E+GLD FMERQ+A A KLA    +  E+                E++R+  R+QE  D MA ER+MREDE K        XXX    DQ+ +R+H +  ++LQ++L KAK  N+
Sbjct:   85 DDSSPAGSGS----SRKVPPLGGLVTHMGSLSIPTLAQSAGVTTEEADYFLKAGFTADEVQTERTVAMMTVLLDKRPTLQRDGHSVEDYVDE-LGDDEDAQLPGVDGVNESVMFDLLDLYGVGKRGFRSLPDSNWFHCGRPVERV-TPGKVQ-VTKRVARLLVLG-AGVTNSGLSAAGQTSISGSTAARGARAMSGMDPSRAASRASGNRGRKTRAKTNKLAEEGLDSFMERQVAQAQKLADQKHEEDERRRAA------------ENKRELGRRQELVDMMAHERAMREDERKXXXXXXXXXXXXXXXDQKADRDHQIKMMQLQVDLAKAKGNNN 400

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KDK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK9_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.890e-29
Identity = 112/289 (38.75%), Postives = 145/289 (50.17%), Query Frame = 2

Query:  725 SPAGGGSASVASRQVPALGDLANDMGAPSITFLSDRTASTRRR----LNLGFTFDLVCAPNAVAMMTVAIGERMLNQRNGQPLDEFIAAGLVED-ELREFPGFGEFVLRKLCDHYSVSDEDFHCLPNSYFSAQGWPLDSSPTAEKMRKLEEQLAELLVLGRVNATIPGPVAAGQGSASGALXXXXXXXXXXXXXXRETSAVXXXXXXKTRTNKNKDIEDGLDGFMERQMASAAKLAADNRQHAEQXXXXXXXXXXXXXXXDEDRRDALRKQEFQDRMAFERSMREDEHK 1576
            SPAG G     SR+VP LGDL   MG+ +I  L++    T       LN GFT D V    AVAMM V +  R+  QR+G  + +++     ED EL  F GF E V+ KL +   V   DFH LP++ +   GWP+D   T +K+ ++ +++A LLVLG    T     AAGQ S  G+          XXXXX   S        K R    K  EDGLD FMERQ+A A  LA   R+  E+                E +R+  R+QE  D MA ER+MREDE K
Sbjct:   11 SPAGSGP----SRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMVVLLDARLCIQRDGDSVQQYMDRLGEEDCELPGFDGFDESVMFKLLELSGVEKMDFHSLPDANWFHGGWPIDRV-TPDKVLQVTKRVASLLVLG-AGVTNSWLSAAGQTSRPGSARVGGAHAMSXXXXXXXXSGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARSLADQRREEDERRWAA------------EAKREVGRRQELLDMMAHERAMREDERK 281

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5L6V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V4_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.060e-27
Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 1

Query:  298 LAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIVDAKA 606
            L+  GL+  V KV GSGR+V ERWD CW +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A RDSGAGTA+S ++       +  LDKVLTAIVDAKA
Sbjct:    6 LSSTGLQNVVLKVNGSGRSVGERWDTCWKTLNQEPLVRLFKDKTSKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESDAEDEVEKNTKVQLDKVLTAIVDAKA 108

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KRG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG0_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 6.800e-27
Identity = 63/103 (61.17%), Postives = 75/103 (72.82%), Query Frame = 1

Query:  298 LAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADLDKVLTAIVDAKA 606
            L+  GL+ EVWKV GSGR+V ERWD CW +LN EP VR+F  K S   K+ YDK+VD QSK +G+A RDSGAGTA+SGS+       +  LDKVLTAIVDAKA
Sbjct:   78 LSSTGLQNEVWKVNGSGRSVGERWDTCWKTLNHEPLVRMFKDKTSKNFKSCYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKA 180

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5KNA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.680e-26
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 1

Query:  322 EVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQXXXXXXAEADL------DKVLTAIVDAKA 606
            EVWKV GSGR+V ERWD CW +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A RDSGAGTA+SGS+       +  L      DKVLTAIVDAKA
Sbjct:    5 EVWKVNGSGRSVGERWDTCWKTLNQEPLVRMFKDKTSKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESGSEDEVEKNTKVQLVRGLEPDKVLTAIVDAKA 105

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BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Match: A0A6H5JB21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB21_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 7.720e-25
Identity = 79/173 (45.66%), Postives = 102/173 (58.96%), Query Frame = 1

Query:   31 KRTPALSAKAVE-AGIQLGRGESARKKPAEGFVDMVRQRADEVLDAGGEEASADDDV---VAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKQEVWKVTGSGRTVTERWDNCWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTAKSGSQ 537
            KR    SAKA++ A  ++G+ E+AR     GF  + +Q A + L+AG             V V APAA              S  W    D+ LA+ GL+ EVWKV GSGR+V ERWD CW +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A  DSGAGTA+SGS+
Sbjct:    7 KRKTTPSAKALDLARDEVGKREAARAAGQLGFAALGQQHARD-LEAGXXXXXXXXXXXXXVQVVAPAAEQARARK-------STKWPPTYDLALARAGLQNEVWKVNGSGRSVGERWDTCWKTLNQEPLVRMFEDKTSKNCKSRYDKIVDDQSKSDGKALPDSGAGTAESGSE 171

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig83.14864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21


Match Name	E-value	Identity	Description
A0A6H5KF37_9PHAE	4.850e-38	50.51	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KXD3_9PHAE	5.100e-38	51.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KUQ4_9PHAE	2.880e-33	44.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0A1_9PHAE	1.790e-31	47.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZ43_ECTSI	1.860e-30	36.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KDK9_9PHAE	7.890e-29	38.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L6V4_9PHAE	2.060e-27	59.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KRG0_9PHAE	6.800e-27	61.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNA6_9PHAE	1.680e-26	61.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JB21_9PHAE	7.720e-25	45.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig83	contig	P-fluviatile_contig83:395163..399168 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	mitochondrion
Exons	5
Model size	2007
Cds size	1227
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817287.492742-UTR-P-fluviatile_contig83:395162..395472	1622817287.492742-UTR-P-fluviatile_contig83:395162..395472	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 395163..395472 +
1693571950.2115436-UTR-P-fluviatile_contig83:395162..395472	1693571950.2115436-UTR-P-fluviatile_contig83:395162..395472	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 395163..395472 +
1622817287.5037286-UTR-P-fluviatile_contig83:396369..396543	1622817287.5037286-UTR-P-fluviatile_contig83:396369..396543	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 396370..396543 +
1693571950.2218153-UTR-P-fluviatile_contig83:396369..396543	1693571950.2218153-UTR-P-fluviatile_contig83:396369..396543	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 396370..396543 +
1622817287.5664473-UTR-P-fluviatile_contig83:398872..399168	1622817287.5664473-UTR-P-fluviatile_contig83:398872..399168	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 398873..399168 +
1693571950.2812169-UTR-P-fluviatile_contig83:398872..399168	1693571950.2812169-UTR-P-fluviatile_contig83:398872..399168	Porterinema fluviatile SAG_2381	UTR	P-fluviatile_contig83 398873..399168 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817287.5147097-CDS-P-fluviatile_contig83:396543..396629	1622817287.5147097-CDS-P-fluviatile_contig83:396543..396629	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 396544..396629 +
1693571950.234175-CDS-P-fluviatile_contig83:396543..396629	1693571950.234175-CDS-P-fluviatile_contig83:396543..396629	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 396544..396629 +
1622817287.5256526-CDS-P-fluviatile_contig83:397263..397299	1622817287.5256526-CDS-P-fluviatile_contig83:397263..397299	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 397264..397299 +
1693571950.2463667-CDS-P-fluviatile_contig83:397263..397299	1693571950.2463667-CDS-P-fluviatile_contig83:397263..397299	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 397264..397299 +
1622817287.5361435-CDS-P-fluviatile_contig83:397538..398309	1622817287.5361435-CDS-P-fluviatile_contig83:397538..398309	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 397539..398309 +
1693571950.2573752-CDS-P-fluviatile_contig83:397538..398309	1693571950.2573752-CDS-P-fluviatile_contig83:397538..398309	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 397539..398309 +
1622817287.5525482-CDS-P-fluviatile_contig83:398538..398872	1622817287.5525482-CDS-P-fluviatile_contig83:398538..398872	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 398539..398872 +
1693571950.2714808-CDS-P-fluviatile_contig83:398538..398872	1693571950.2714808-CDS-P-fluviatile_contig83:398538..398872	Porterinema fluviatile SAG_2381	CDS	P-fluviatile_contig83 398539..398872 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig83.14864.1	prot_P-fluviatile_contig83.14864.1	Porterinema fluviatile SAG_2381	polypeptide	P-fluviatile_contig83 396544..398872 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-fluviatile_contig83:395163..399168+
coding sequence from alignment at P-fluviatile_contig83:395163..399168+

protein sequence of mRNA_P-fluviatile_contig83.14864.1

>prot_P-fluviatile_contig83.14864.1 ID=prot_P-fluviatile_contig83.14864.1|Name=mRNA_P-fluviatile_contig83.14864.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=409bp
MVKLSGTPELAPPRVVRKTKKRRRQRPTWTKSSPRSWTRRLGRVRPATST
AGTASGRSSPTLSSGRSSPTLGMGGTSDAPSPAGGGSASVASRQVPALGD
LANDMGAPSITFLSDRTASTRRRLNLGFTFDLVCAPNAVAMMTVAIGERM
LNQRNGQPLDEFIAAGLVEDELREFPGFGEFVLRKLCDHYSVSDEDFHCL
PNSYFSAQGWPLDSSPTAEKMRKLEEQLAELLVLGRVNATIPGPVAAGQG
SASGALGAGDGRASSSAGPSRETSAVSANRNRKTRTNKNKDIEDGLDGFM
ERQMASAAKLAADNRQHAEQKEAAAEKRRRAEKKEDEDRRDALRKQEFQD
RMAFERSMREDEHKQRMAEQTRERQEAREDQRLEREHTLAQLKLQIELEK
AKSKNSTG*

mRNA from alignment at P-fluviatile_contig83:395163..399168+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-fluviatile_contig83.14864.1 ID=mRNA_P-fluviatile_contig83.14864.1|Name=mRNA_P-fluviatile_contig83.14864.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4006bp|location=Sequence derived from alignment at P-fluviatile_contig83:395163..399168+ (Porterinema fluviatile SAG_2381)
GTCTGCACCAAGAACATGTCAAGGGTTAGCAAGAGAACCCCAGCACTCTC
GGCGAAGGCCGTAGAGGCTGGGATACAACTCGGGAGAGGAGAGTCTGCGC
GAAAGAAGCCCGCCGAGGGATTTGTAGACATGGTTCGGCAGCGCGCCGAT
GAGGTCTTGGACGCTGGGGGAGAGGAGGCCTCTGCAGACGACGACGTGGT
AGCAGTAGAAGCACCAGCAGCGAGTGCAGCGCCATTAGCGAAGAAGGCGA
AGAAGTCCAGGAAGAGCAAGATATGGAGCACGGGGATCGATGTAATGCTG
GCGCAACAAGGTGAGTTTCCTTGGCGGCGCTCAGGGGCAGAAGTTGTCGA
TGTGCTGCTGGTGGCGGACGGCTGTGGTTACGTTGCCTACTCTCACGGTG
CCTGTACCCTCTCGAACCCCCCGCTGCCGAACGCCACATCGCCGATGCAA
CGGTCGTCAGCGAGGGAAAACTTCATCCCCGGGTACTGGTTTGTTGCCGG
GTGAAGGGTGCAGAGAGAGAAACACACAGAGATGCGCGCGAACAATAGAA
GGCCGAAGAAGAAGATAAACAACGCGCGTGTGTTTGAATCCAAAAATGCC
GCTGGTGCCGCGAGATCCAAGGATCATGCACTCACAAGTACACAGCAGAT
ACGTTGCAATCACCTCAGGAGAAGGAGCACAGCGAACACACGCAGACATT
AGAATGCAATACAAACGGCGCGGTTTTTGTATCGATGTCCCAAACTTGCA
TCTGATCATGTATTACTTCGAAGCTGAAGTGGTGGTCTACATGTCGTTCC
TGTTCTCGCTCCCGCACACCGCAATCAAATCCTCTTACACGGCCGCACCA
CATGGCGGGGTCGAGCGGGCGACACCAATATTTCTAAAGATATTCTTGAT
GAAGGAAGCCATTTCGTCCCGAATTGCTGTTAGTAAGGTGTACGATGCGG
ATGATTAACTACTGCCTAGACTAGTAAAGCATACCTGCTGTGGGTAGGGT
GTTTCTTCTGCACAGAAAGCAACCATGTGCCCGCCTTTCGTGAGAGCAGA
AGCATGGAACAAGTTTTCCCCCTGAAGCATAGACGGCCAGCGCACCACGT
TTTGGTTTCGATGATTCGTGTCAAAAATATCCTGCAATCAAGTCTCGAAC
GACTTCGTGAGCGGGCGCCGACATCATACCCTGCCGGCATACCCTTCGCC
GCCATAGGTCTGAAGCAGGAAGTCTGGAAAGTGACTGGTAGTGGGCGGAC
GGTCACGGAGAGGTGGGACAACTGCTGGGCCAGCCTTAACGAGGAGCCGT
TCGTCAGGGTGTTCGGCAGCAAGGCCTCTGGCACTTGCAAGGCGCGCTAC
GACAAGCTCGTCGACCAGCAGAGCAAGAAAAATGGTCAAGCTCAGCGGGA
CTCCGGAGCTGGCACCGCCAAGAGTGGTTCGCAAGACGAAGAAGAGGAGA
AGGCAGAGGCCGACCTGGTGAGAGGCATTGGTGATTAGCCTGTTGTTGTC
GCCACAACGGTTTTTGTGATGCCAGCCCGCCTTCATGATCCGGAAATCGA
TTTACGTTTGTCCCCGTTGGTTTGCAGTTGGTACTGCTGGCGGGCGCAAC
CAATGAGGTTGTCGCCTACCACATACCGTACGAAATACCTCGTACTTTGA
AGTCTGAAGCTTCTCACACTCCGCGGACACCTTTCACCATGACTAGTGCA
AATGGGTAAACACGGGATCCAAAACGCGATAAAGTTACACAATCTGTGTG
GGACTGAAAAGTATAGTCCGGCACAGCAGTTCCGCCCCAATATAAAAAAA
AAAACTCTAAGAACAAACACCCCATTTCCGTGCGAAACTTTAAGCGACGA
ACACAACCTCTCGAGTACGTACCATTTGTGTAGGTGTAAACTGAGAAGTA
TCTCCCACGAAAATTGACGGTATCGTTAGTGGGCAGAAATACCTCTGTCC
CATGGCTCGGCGCCTGTTCTTCGGGGCTGACGCAAAAAAAAACGTGGGTG
ACGACCACAGACCAAACTATTATCGCCCGACATCGGGTGATACAGGGCTC
AAGCCGCTGCCACGCCCGCCCTTGATCGTTCGTACGCCATTTTCTGCTCA
GGACAAAGTCCTCACCGCGATCGTGGACGCGAAGGCTGCTGCGAAGCAAG
ACTCGGAAGAGAGCAAGAAAAAGCAGGCTGACGAAGTCGCCAGGAACACC
GCCATGGGGTCAATGGCGGTGAGCCAGGGCCTGAAACTTTGCGGGCCAGG
CGCCAAGGCTACATCGTTTGGAGATGCCCTGGCCATGGACAACGCCGGGT
TTGCTGCCTTCTCGACCCAACCGGACAACGCCGGGTTTGCTGCCTTCTCG
ACCCAACCGGCAGCCAGCAGTGCCAGTGGCCGAGTGCGCCCGGCCACAAG
TACGGCTGGCACTGCCAGCGGTCGATCGAGCCCGACCCTGAGCAGCGGTC
GATCGAGCCCGACCCTGGGCATGGGTGGGACAAGCGACGCCCCCTCGCCG
GCGGGTGGTGGCTCTGCCTCTGTTGCGTCTAGACAGGTCCCGGCGCTCGG
GGACTTAGCGAACGACATGGGAGCGCCGAGCATCACCTTTCTTTCTGACC
GCACGGCGTCCACCAGGAGGAGGCTCAACTTGGGCTTTACGTTCGACCTC
GTTTGTGCTCCCAACGCCGTCGCCATGATGACGGTGGCAATCGGAGAAAG
GATGCTGAATCAGCGCAACGGACAACCCCTCGACGAGTTCATAGCAGCCG
GCCTTGTTGAGGATGAACTACGGGAGTTTCCCGGGTTTGGGGAGTTTGTC
TTGCGTAAGCTGTGCGATCACTACAGCGTTAGCGACGAAGACTTCCACTG
CTTGCCCAACTCGTACTTCTCTGCTCAAGGATGGCCCCTAGACTCGAGTC
CTACGGCGGAGAAGATGAGGAAGCTGGAGGAGCAGCTGGCGGAGCTGTTG
GTGCTCGGTCGCGTCAACGCGACCATACCCGGTCCCGTCGCCGCCGGTCA
AGGGTCCGCCTCCGGTGCTCTTGGCGCCGGGGACGGGAGGGCTAGTTCGA
GCGCGGGCCCTTCGCGCGAGACCAGTGCCGTATCGGCAAACCGAAACAGG
AAGACCCGTACAAACAAGAACAAGGACATCGAAGACGGACTCGATGGGTA
AGGCCGAAGCTCTGTGGATACTCTCAATGTCGCTGATTTCGCCACCCCTC
AACTTGGCTTGGTGTTTCGTGTTCTTGTTTCTCTTTGGACGATAGCGGTT
TGCCAGCATAATAGCTATTTTTGGAGTTAGCTATTGCACCAGTTGAGGTA
GGGCAGAGCGCACGCCCTTGGCAATTGAATAACGTTGAAGAAATCCCCCC
ACTGTTGTCCGTGTCGCTTGTCGCAGGTTTATGGAACGTCAGATGGCTTC
GGCAGCGAAACTCGCCGCTGACAACAGGCAGCACGCCGAGCAGAAGGAAG
CCGCGGCTGAGAAACGCAGGAGGGCTGAGAAGAAGGAGGACGAAGATCGA
AGGGACGCGCTGAGGAAGCAGGAGTTTCAGGACAGGATGGCCTTCGAGAG
AAGCATGCGGGAGGACGAGCACAAGCAGAGGATGGCGGAGCAAACTCGAG
AAAGGCAAGAGGCCCGTGAAGACCAGCGGTTGGAACGGGAGCACACGTTG
GCCCAGCTCAAACTGCAGATAGAGCTGGAAAAAGCCAAATCAAAGAATTC
CACAGGATAATGGAGTGCTGAGGTCCCGCACTAGCCGCATCCTGGATGTG
CCACGGCAGGTTTTCCCACGGCAGACTTTCTAGTTTTCAGCACAACATCC
GCGGTGTCTTGCGCATTTTCTGCTGCGTTCGCTTTGCGCTTTTCTTTTCT
TCTGCGTTCGCTTTGCTTGTGCGCGGGTGGGAGGGGTAGAAGGTTTGTTG
TTTGATGCCGACACTGCTGCCTGTGTTCGGGCACGATTCGTTTTTTTTTG
ACGCCGTCAGCAGCAGTCACCCGAGAATGAGCGTGGCATCCGTCGCGTCT
TGCACG

Coding sequence (CDS) from alignment at P-fluviatile_contig83:395163..399168+

>mRNA_P-fluviatile_contig83.14864.1 ID=mRNA_P-fluviatile_contig83.14864.1|Name=mRNA_P-fluviatile_contig83.14864.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2454bp|location=Sequence derived from alignment at P-fluviatile_contig83:395163..399168+ (Porterinema fluviatile SAG_2381)
ATGGTCAAGCTCAGCGGGACTCCGGAGCTGGCACCGCCAAGAGTGGTTCG
CAAGACGAAGAAGAGGAGAAGGCAGAGGCCGACCTGATGGTCAAGCTCAG
CGGGACTCCGGAGCTGGCACCGCCAAGAGTGGTTCGCAAGACGAAGAAGA
GGAGAAGGCAGAGGCCGACCTGGACAAAGTCCTCACCGCGATCGTGGACG
CGAAGGCTGACAAAGTCCTCACCGCGATCGTGGACGCGAAGGCTTGGCCG
AGTGCGCCCGGCCACAAGTACGGCTGGCACTGCCAGCGGTCGATCGAGCC
CGACCCTGAGCAGCGGTCGATCGAGCCCGACCCTGGGCATGGGTGGGACA
AGCGACGCCCCCTCGCCGGCGGGTGGTGGCTCTGCCTCTGTTGCGTCTAG
ACAGGTCCCGGCGCTCGGGGACTTAGCGAACGACATGGGAGCGCCGAGCA
TCACCTTTCTTTCTGACCGCACGGCGTCCACCAGGAGGAGGCTCAACTTG
GGCTTTACGTTCGACCTCGTTTGTGCTCCCAACGCCGTCGCCATGATGAC
GGTGGCAATCGGAGAAAGGATGCTGAATCAGCGCAACGGACAACCCCTCG
ACGAGTTCATAGCAGCCGGCCTTGTTGAGGATGAACTACGGGAGTTTCCC
GGGTTTGGGGAGTTTGTCTTGCGTAAGCTGTGCGATCACTACAGCGTTAG
CGACGAAGACTTCCACTGCTTGCCCAACTCGTACTTCTCTGCTCAAGGAT
GGCCCCTAGACTCGAGTCCTACGGCGGAGAAGATGAGGAAGCTGGAGGAG
CAGCTGGCGGAGCTGTTGGTGCTCGGTCGCGTCAACGCGACCATACCCGG
TCCCGTCGCCGCCGGTCAAGGGTCCGCCTCCGGTGCTCTTGGCGCCGGGG
ACGGGAGGGCTAGTTCGAGCGCGGGCCCTTCGCGCGAGACCAGTGCCGTA
TCGGCAAACCGAAACAGGAAGACCCGTACAAACAAGAACAAGGACATCGA
AGACGGACTCGATGGTGGCCGAGTGCGCCCGGCCACAAGTACGGCTGGCA
CTGCCAGCGGTCGATCGAGCCCGACCCTGAGCAGCGGTCGATCGAGCCCG
ACCCTGGGCATGGGTGGGACAAGCGACGCCCCCTCGCCGGCGGGTGGTGG
CTCTGCCTCTGTTGCGTCTAGACAGGTCCCGGCGCTCGGGGACTTAGCGA
ACGACATGGGAGCGCCGAGCATCACCTTTCTTTCTGACCGCACGGCGTCC
ACCAGGAGGAGGCTCAACTTGGGCTTTACGTTCGACCTCGTTTGTGCTCC
CAACGCCGTCGCCATGATGACGGTGGCAATCGGAGAAAGGATGCTGAATC
AGCGCAACGGACAACCCCTCGACGAGTTCATAGCAGCCGGCCTTGTTGAG
GATGAACTACGGGAGTTTCCCGGGTTTGGGGAGTTTGTCTTGCGTAAGCT
GTGCGATCACTACAGCGTTAGCGACGAAGACTTCCACTGCTTGCCCAACT
CGTACTTCTCTGCTCAAGGATGGCCCCTAGACTCGAGTCCTACGGCGGAG
AAGATGAGGAAGCTGGAGGAGCAGCTGGCGGAGCTGTTGGTGCTCGGTCG
CGTCAACGCGACCATACCCGGTCCCGTCGCCGCCGGTCAAGGGTCCGCCT
CCGGTGCTCTTGGCGCCGGGGACGGGAGGGCTAGTTCGAGCGCGGGCCCT
TCGCGCGAGACCAGTGCCGTATCGGCAAACCGAAACAGGAAGACCCGTAC
AAACAAGAACAAGGACATCGAAGACGGACTCGATGGGTTTATGGAACGTC
AGATGGCTTCGGCAGCGAAACTCGCCGCTGACAACAGGCAGCACGCCGAG
CAGAAGGAAGCCGCGGCTGAGAAACGCAGGAGGGCTGAGAAGAAGGAGGA
CGAAGATCGAAGGGACGCGCTGAGGAAGCAGGAGTTTCAGGACAGGATGG
CCTTCGAGAGAAGCATGCGGGAGGACGAGCACAAGCAGAGGATGGCGGAG
CAAACTCGAGAAAGGCAAGAGGCCCGTGAAGACCAGCGGTTGGAACGGGA
GCACACGTTGGCCCAGCTCAAACTGCAGATAGAGCTGGAAAAAGCCAAAT
CAAAGAATTCCACAGGATAAGTTTATGGAACGTCAGATGGCTTCGGCAGC
GAAACTCGCCGCTGACAACAGGCAGCACGCCGAGCAGAAGGAAGCCGCGG
CTGAGAAACGCAGGAGGGCTGAGAAGAAGGAGGACGAAGATCGAAGGGAC
GCGCTGAGGAAGCAGGAGTTTCAGGACAGGATGGCCTTCGAGAGAAGCAT
GCGGGAGGACGAGCACAAGCAGAGGATGGCGGAGCAAACTCGAGAAAGGC
AAGAGGCCCGTGAAGACCAGCGGTTGGAACGGGAGCACACGTTGGCCCAG
CTCAAACTGCAGATAGAGCTGGAAAAAGCCAAATCAAAGAATTCCACAGG
ATAA