mRNA_P-fluviatile_contig83.14861.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig83.14861.1
Unique NamemRNA_P-fluviatile_contig83.14861.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig83.14861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig83contigP-fluviatile_contig83:369001..371600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size447
Cds size447
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817283.5462065-CDS-P-fluviatile_contig83:369000..3693811622817283.5462065-CDS-P-fluviatile_contig83:369000..369381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 369001..369381 -
1693571934.2966363-CDS-P-fluviatile_contig83:369000..3693811693571934.2966363-CDS-P-fluviatile_contig83:369000..369381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 369001..369381 -
1622817283.5558164-CDS-P-fluviatile_contig83:371534..3716001622817283.5558164-CDS-P-fluviatile_contig83:371534..371600Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 371535..371600 -
1693571934.312886-CDS-P-fluviatile_contig83:371534..3716001693571934.312886-CDS-P-fluviatile_contig83:371534..371600Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 371535..371600 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig83.14861.1prot_P-fluviatile_contig83.14861.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig83 369001..371600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig83.14861.1

>prot_P-fluviatile_contig83.14861.1 ID=prot_P-fluviatile_contig83.14861.1|Name=mRNA_P-fluviatile_contig83.14861.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=149bp
VERTERRREEAQESASGAPLFTMVMQTRNRGRAASVSASRRSGSSSRTPS
RGRGRSRGNSRGGRGRGRGGRGDRGGRAESTPPPSSSAPTPADRELLQQL
RERLEAMQDTVDNLVGVNGQLQAELDDIRVGQSEGDAMDEADDAEEPEV
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mRNA from alignment at P-fluviatile_contig83:369001..371600-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig83.14861.1 ID=mRNA_P-fluviatile_contig83.14861.1|Name=mRNA_P-fluviatile_contig83.14861.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2600bp|location=Sequence derived from alignment at P-fluviatile_contig83:369001..371600- (Porterinema fluviatile SAG_2381)
GTGGAGCGGACCGAGAGACGCAGGGAGGAGGCCCAAGAGTCGGCATCCGG
GGCACCTCTGTTCACGGTACGTGTATGATGTATGGGTGAGAATAGATGTG
GGGTGCCGCGAGGGCGATATGCGTGTTGCGACATGCGAGGGCGATATTCA
CGTGATGAGACGTGTGTGCCGGCTCGCGTGTGCGTGCACGCCTGACAGCG
CTGGTTCACGCGGGATTGTACGTATCGTCTTTGGGCGGGGACCGCGCTGC
TGTTGCAACGCGTTGTCCGCGGAGCTATTCGCATCGTGATAATTCGTGGC
TTGCTGAGTGTACCAGCTCCACCTGCTGCAGATCTTGCCGTCCCGGTGAT
GCACACACCCCCCCTCATTTAAATTTAAATAAATAAAAAAAAAAATTGGG
ATTTTTTTTGCCTTTACCAACCACATAAATAGTGGTTGGCGGTTGTAGCG
GGGGAGAGTGCTGTTGTGAACAGCCTTTAACCGTTGCGGTTGTTGCCTTC
CGGTGATGCACGCACACATGTTATGTATTGGGTCGCCTGCACCAACTACA
TAAATAGTGGTTGGCGGTTGTAGTGCCGGGGATGCTGGGCGTACCAGCTC
CGCCCGCTGCAGCTGTCGCCGTCCCGACGATGCACGCACACACCCTCATT
AATACTGGATTGCCTGTACCAGCCACATAAATAGTGTTGGCGGCCGTAGC
GGGGAAGAGTGCTTGTTGTGAACAGCCTTTAACCGTTGCGGTTGCTGCCA
TTCCGGTGATGCACGCACATATGTTAGGTATTGGATCGCCTGTACCAACC
ACATAAATAGTGGTTGGCGGTTGTATTATGGGGGATGCTGGGTGTACCAC
CTCCACCCGCTGCAGTTGTCGCCGTCACGATGCACGCACACACCCTCATT
TACATTTGGTTTGTACCAACCACATAAATAGTGGTTGGCGGCTGTAGCGG
GGAAGAGTGCTTGTTGTGAACAGCCTTTAACCGTTGCGGTCGTTGCCTTC
CGGTGATGCACGCACCTATGGTATGTATTGGATCGCCTGTACCAACCACA
TAAATAGTGGTTGGCGGTTGTAGTATGGGGGATGCTGGGTGTACCAGCTC
CACCCGCTGCAGCTGTCGCCGTCCCGGCGATGCACGCACACACCCTCATT
TATATTTGGTCTGTACCAACCACATAAATAGTGGTTGGCGGCTGTAGCGG
GGAAGAGTGCTTGTTGTGAACAGCCTTCAACCGTTGCGGTCGTTGCCTGC
CGGTGATGCATGCACATATGTTATGTATTGGATCGCCTGTACCAACCACA
TAAATAGTGGTTGGCGGTTGTAGTATGGGGGATGCTGGGTGTACCAGCTC
CACCCGCTGCAGTTGTCGCCGTACCGGCGATGCACGCACACACCCTCATT
TATATTTGACCTGTACCAACCACATAAATAGTGGTTGGCGGCTGTAGCGG
GGAAGAGTGCTTGTTGTGAACAGCCTTTAACCGGTGCGGTCGTCGCCTTC
CGGTGATGCACGCACATATGTTATGTATTGGATCGCTTGTACCAACCACA
TAAATAGTGGTTGGCGGTTGTAGTATGGGGATGCTGGGTGTACCAGCTCC
ACCCGCTGCAGTGTCGCCGTACCGGCGATGCACGCACACCCCTCATTTAT
ATTTGACCTGTACCAACCACATAAATAGTGGTTGGCGGCTGTAGCGGGGA
AGAGTGCTTGTTGTGAACAGCCTTTAACCGGTGCGGTCGTCGCCTTCCGG
TGATGCACGCACATATGTTATATATTGGATCGCTTGTACCAACCACATAA
ATAGTGGTTGGCGGTTGTAGTATGGGGATGCTGGGTGTACCAGCTCCACC
CGCTGCAGCTGTCGCCATCCCGGCGATGCACGCACACCCCTCATTTATAT
TTGGTCTGTACCAACCACATAAATAGTGGTTGGCGGCTGTAGCGGGGAAG
AGTGCTTGTTGTGAACAGCCTTTGCCCGTTGTGGTTGTTGCCTTCCGGTG
ATGCACGCACAGATAATATGGAAATACGTTGCCTGCACCAATCACATAAA
TAGTGGTTGGCGGTTGTCATGCGGGGAAGTGCGTTGTTGAAACGATTCCG
GCCCAGTGGACTTCTGTTGCCTTACGGCAATGCACGCCGTGAATGGTTGA
TGGAAAAATTCGAAATCTAACGGATTCGTGATGGACCCGTCCCCGCTGAC
GTCCCCCGCAAATGTCCAGATGGTTATGCAAACGCGGAACCGCGGGCGGG
CGGCCTCAGTGTCGGCGTCCAGGCGGTCCGGATCCTCGTCCCGCACACCG
TCCAGGGGGCGGGGAAGAAGTCGGGGAAACAGCCGGGGGGGACGGGGACG
CGGCCGAGGGGGGCGCGGCGATCGGGGTGGGCGCGCAGAGTCGACGCCGC
CGCCGTCCTCGTCCGCGCCCACGCCCGCTGACCGCGAGCTGCTCCAGCAA
CTGCGCGAGCGGCTGGAGGCGATGCAGGACACGGTCGACAACCTGGTGGG
GGTCAACGGCCAGCTGCAAGCGGAGCTCGACGACATCCGCGTCGGCCAGT
CTGAAGGGGACGCGATGGATGAGGCCGACGATGCCGAAGAGCCGGAGGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig83:369001..371600-

>mRNA_P-fluviatile_contig83.14861.1 ID=mRNA_P-fluviatile_contig83.14861.1|Name=mRNA_P-fluviatile_contig83.14861.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=894bp|location=Sequence derived from alignment at P-fluviatile_contig83:369001..371600- (Porterinema fluviatile SAG_2381)
GTGGAGCGGACCGAGAGACGCAGGGAGGAGGCCCAAGAGTCGGCATCCGG
GGCACCTCTGTTCACGGTGGAGCGGACCGAGAGACGCAGGGAGGAGGCCC
AAGAGTCGGCATCCGGGGCACCTCTGTTCACGATGGTTATGCAAACGCGG
AACCGCGGGCGGGCGGCCTCAGTGTCGGCGTCCAGGCGGTCCGGATCCTC
GTCCCGCACACCGTCCAGGGGGCGGGGAAGAAGTCGGGGAAACAGCCGGG
GGGGACGGGGACGCGGCCGAGGGGGGCGCGGCGATCGGGGTGGGCGCGCA
GAGTCGACGCCGCCGCCGTCCTCGTCCGCGCCCACGCCCGCTGACCGCGA
GCTGCTCCAGCAACTGCGCGAGCGGCTGGAGGCGATGCAGGACACGGTCG
ACAACCTGGTGGGGGTCAACGGCCAGCTGCAAGCGGAGCTCGACGACATC
CGCGTCGGCCAGTCTGAAGGGGACGCGATGGATGAGGCCGACGATGCCGA
AGAGCCGGAGGTGATGGTTATGCAAACGCGGAACCGCGGGCGGGCGGCCT
CAGTGTCGGCGTCCAGGCGGTCCGGATCCTCGTCCCGCACACCGTCCAGG
GGGCGGGGAAGAAGTCGGGGAAACAGCCGGGGGGGACGGGGACGCGGCCG
AGGGGGGCGCGGCGATCGGGGTGGGCGCGCAGAGTCGACGCCGCCGCCGT
CCTCGTCCGCGCCCACGCCCGCTGACCGCGAGCTGCTCCAGCAACTGCGC
GAGCGGCTGGAGGCGATGCAGGACACGGTCGACAACCTGGTGGGGGTCAA
CGGCCAGCTGCAAGCGGAGCTCGACGACATCCGCGTCGGCCAGTCTGAAG
GGGACGCGATGGATGAGGCCGACGATGCCGAAGAGCCGGAGGTG
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