mRNA_P-fluviatile_contig81.14781.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: D7FMH2_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH2_ECTSI) HSP 1 Score: 382 bits (981), Expect = 6.290e-123 Identity = 245/421 (58.19%), Postives = 287/421 (68.17%), Query Frame = 3
Query: 57 MRLDLVSSAATLGLLLEEVLPEFAFA--RRGSTEPLLAR-QPCSGAGATF-------VATTDMTRTPAEVEKEG----------AAEVAPRATAGGDAXXXXXXXXXXXXXXRRGGNRGA--TSKATRFERGRSAMATGAAGAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
MRLD+ ++A +L +E L EFA A R+GS + + R +P + +++ VA T M R A+ + G + VAP A A XXX XXXX GA ATRFERG +A+ + +PSVTLKLAMD+NGAVDDMSEGPKRFTS SLDAVHRIRRDCEAVLVGVGTVVRD+PSLTVRRVPL GQT QPTRVVLDRTLRLT G AGQ RAILRDGH S+VFYSAGCE+ TEARA +LK DV+ + A SDS G +T AP +D VG+P + GAGVDL+ VL AL E RG++HVLVEGGP VA+GFLSE LVDRA+I+RAP+EF RPVPSDI +DTL+RAGLELVG T+WGDDE ECWTRPGL WPGG VG+WP
Sbjct: 1 MRLDVWTAAVAFSVLPQETLSEFAVAGRRQGSLDAGVFRVRPSCPSSSSYRGNSNGDVAATAMDRNIAKHHEAGPPRISSETTQSKHVAPAAAAAXXXXXXGRAGEAEXXXXXXXXXXGAPMAEGATRFERGGAAVTESRGRGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSPASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNGGQTRQPTRVVLDRTLRLT--GAQAGQNP-RAILRDGHSSLVFYSAGCED-TEARAAELKADVK--RSRTAVSDSPGETEPDTSHQKLAP--VDFVGMPVQRPGAGVDLSGVLGALLE-----RGIDHVLVEGGPSVARGFLSERLVDRAIIIRAPMEFVRPVPSDIATDTLRRAGLELVGCTKWGDDEAECWTRPGLGWPGGGVGSWP 408
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A836CBN8_9STRA (Riboflavin biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN8_9STRA) HSP 1 Score: 251 bits (642), Expect = 5.640e-75 Identity = 144/286 (50.35%), Postives = 178/286 (62.24%), Query Frame = 3
Query: 396 MATGAAGAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
MA A P VTLKLA+D+ GAVDD SE PKRFTS ESLDAVHR+RRD AV+VGV TVVRDNPSLTVRRVPL +GQ +QP RVVLDR LR+ E + +L DGHP+ V ++ +ARA +L V GL P ID +P G L +V+ L + RG+ H++VEGGP +A+ FLS+ LVDRA+IV+APV+F +PVPS I L+ AGLEL+G+T+WG DEVECW++PGL WP G VG WP
Sbjct: 1 MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQ-QQPLRVVLDRNLRIPEADQCQ-------LLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGL-----------------------PVMID--DIPTDTPEDGCPLLTVVRFLGQ-----RGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 248
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A6U6BWZ9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BWZ9_GUITH) HSP 1 Score: 194 bits (493), Expect = 1.270e-52 Identity = 116/281 (41.28%), Postives = 168/281 (59.79%), Query Frame = 3
Query: 420 KEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLP-PRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSR-PVPSDITSDTLQRAGLELVGSTR-WGDDEVECWTRPGLRWPGGRVGAWP 1253
+++P VTLK+A+D+NGAVDD+ KRFTS++SLDAVHR+RR +AVLVG+GTVVRD+PSLTVRRVPL EG+ EQP R V+D +L++ ++RDG+ +V+F+S +E + R +QL ++E + V+F +P P +DL S+L LS GV+ +++EGGP K FL + LVDRA+++ AP++F + PVPS I L+ AGL L+G + WG D V W++ L+WP + WP
Sbjct: 75 EQLPIVTLKIALDENGAVDDLGITSKRFTSEQSLDAVHRLRRCSDAVLVGIGTVVRDDPSLTVRRVPLLEGR-EQPLRAVIDPSLKI---------EAHCKVMRDGYKTVIFHSDS--DEVDKRRIQLISELE---------------ATNQVSF-----------IPTPTNQHRSLDLTSILGELSNL-----GVKELMLEGGPATVKRFLQQKLVDRAIVIVAPIKFDQLPVPSLIDHHVLKAAGLALLGEHQDWGKDSVSLWSKAQLQWPSPVISEWP 312
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: I2CPJ6_NANGC (Riboflavin biosynthesis protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ6_NANGC) HSP 1 Score: 191 bits (484), Expect = 4.850e-52 Identity = 124/282 (43.97%), Postives = 154/282 (54.61%), Query Frame = 3
Query: 414 GAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGV-EHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSR-PVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
G E P VT+KLA+D+ GAVDD + P RFT + SLDAVHR+RR+ EAV+VGV TVVRD+PSLTVRRVPLR Q QP RVVLDR+LR+ +L D H ++V+Y G A + L V AP ID + P D A +LE L L GV EH++VEGGPR AK FL + VDRAVI A +EF P+PS + + L++AGL +GS G D V CW+RP L WP + WP
Sbjct: 16 GKGERPRVTVKLAVDRKGAVDDATLKPGRFTCEASLDAVHRLRRESEAVVVGVETVVRDDPSLTVRRVPLRPDQ-RQPIRVVLDRSLRIPYSS---------TLLNDRHRTLVYYVQGPWRHMRAADIMLSKFV-------------------------APVLIDCINEPEL---RPEDPAPLLEVLGR--LYDMGVREHIMVEGGPRTAKAFLDAACVDRAVIFEAAMEFKGDPIPSGVDENVLKKAGLMYLGSYPSGVDMVHCWSRPDLPWPAQELSDWP 257
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A832V5V4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=2 Tax=Archaea TaxID=2157 RepID=A0A832V5V4_9ARCH) HSP 1 Score: 189 bits (481), Expect = 3.750e-50 Identity = 114/276 (41.30%), Postives = 156/276 (56.52%), Query Frame = 3
Query: 426 VPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
+P VTLK+A+DKNGAVDD +E RFTSQESLDAVHR+R+D +A++VGVGTV+RDNPSLTVRR+ L EG+ QP RVVLDR L+ D I+ D H +++F+ G EE+ A + +++VE +A + S GVDL +L L + RG + VL+EGGP A+ FL+ VDR V+++A V+FS+P P + + AGL+ + WG D V W++ GL WP V WP
Sbjct: 155 IPLVTLKVAIDKNGAVDDRAEDSFRFTSQESLDAVHRLRKDVDAIIVGVGTVLRDNPSLTVRRIELGEGK--QPLRVVLDRELKTP---------IDSIIVNDDHDTLIFHVEGREEKIAA--LNSRNNVEVHKLQSARNHS------------------------------GVDLHLLLSLLGD-----RGYQEVLLEGGPETARRFLAAETVDRVVLIKADVDFSQPFPLSLGDEDFSAAGLQRLSDVHWGVDTVSRWSKAGLGWP---VDGWP 379
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A842P3K4_9EURY (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842P3K4_9EURY) HSP 1 Score: 181 bits (459), Expect = 3.320e-47 Identity = 109/278 (39.21%), Postives = 153/278 (55.04%), Query Frame = 3
Query: 420 KEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
K +P VTLK+A+D NGAVDD +E RFTS+ESL+AVHR+R+D +A++VG+GT++RDNPSLTVRR+ + G +QP RV+LDR L+ D I+ DGH +++ + G E E AA DS ETV + SA +GVDL +L L + RG + VL+EGGP A+ F++ LVDR +I++ +FS+ P + D + AGL +G + WG D V+ W+R L WP WP
Sbjct: 141 KRIPLVTLKIAVDSNGAVDDRAEDSFRFTSEESLNAVHRLRKDVDAIIVGIGTIIRDNPSLTVRRIEM--GLGKQPLRVILDRELKTP---------LDSTIVNDGHNTLILHVEGREGEI------------------AALDS-----RETVEVQKLQSARS---------HSGVDLHLLLSLLGD-----RGFQEVLLEGGPETARRFIAAGLVDRLIIIQTKAQFSQGFPLSLGDDDFRNAGLVRLGDSEWGGDSVQRWSREDLNWP---AEDWP 367
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A0G4F4C9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F4C9_VITBC) HSP 1 Score: 177 bits (448), Expect = 2.200e-46 Identity = 119/315 (37.78%), Postives = 170/315 (53.97%), Query Frame = 3
Query: 429 PSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEAR---------------------AVQLK----------DDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAG-------AGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAP-VEFS-RPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
P VT+KLA+D+NGAVDD+ P+RFT E+LD VHRIR + V+VGV T++RD+ LTVRRVPL GQ+ QP RVVLD +LR+ + D +L D + +VVF ++ ++ A ++ K D++E ++ D K E + G++P + L +PP G+DL ++L+ L GV+H +VE GPR+ FL++ LVDR V+VRA VEF +P+PS +T+ TLQRAGL+ V WG DEV W+R G+ WP +WP
Sbjct: 8 PEVTVKLAVDRNGAVDDLKIAPERFTCSEALDKVHRIRLASDCVIVGVNTIIRDDAQLTVRRVPLAPGQS-QPLRVVLDPSLRIPK---------DAQVLTDEYSTVVFCASATDDPLLALNPPPSRRGDLVAPPAFASSRPTLKTKSGVSVDRVWLDEIEEMMEG----DQQKRKRWEALFGGQSPPSKILRLIPPATGQFARADRRIGLDLRALLDHLGRDF----GVKHAMVEAGPRLVDSFLTQGLVDRLVVVRATSVEFQGQPLPSHVTAATLQRAGLQQVARGVWGADEVTYWSRKGIPWPTDDPASWP 304
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A7S2LDW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDW0_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.150e-46 Identity = 117/281 (41.64%), Postives = 154/281 (54.80%), Query Frame = 3
Query: 423 EVPSVTLKLAMDKNGA--VDDMSEGP-KRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPG-GRVGAWP 1253
+V VTLK+A D + V D+SE +RFTS ESLD VHR+RRD AVLVG GTV D+ SL+VRRV L EGQ EQP RV+LD +L L G + AI DG ++V+YS + + + DD + A + D K +PS I DLA+ RG+ H++VEGGP A+ FL +VDRA++VRAPVEF PVP+ + DT++ AGL ++G+T G D VE WTR GL WP + +WP
Sbjct: 59 KVTGVTLKMAFDSSPVWGVADLSETKSERFTSPESLDMVHRLRRDSSAVLVGRGTVEFDDCSLSVRRVELGEGQ-EQPVRVILDPSLSLVGG--------EYAIFNDGLRTIVYYSQSAAQNKDVP-LPSSDDCVIFVPLAQSDDEKNDKIPSL-----SPSEIVQ------------DLAT------------RGLTHIMVEGGPATARAFLHSGVVDRAILVRAPVEFQEPVPAQMDEDTMKTAGLNMIGTTEMGGDVVEYWTREGLEWPNPDDLSSWP 300
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A6V8EGV0_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=4 Tax=Archaea TaxID=2157 RepID=A0A6V8EGV0_9ARCH) HSP 1 Score: 176 bits (445), Expect = 2.670e-45 Identity = 109/267 (40.82%), Postives = 144/267 (53.93%), Query Frame = 3
Query: 429 PSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWP 1229
P VTLK AMD NG VD E P RFTS+ESLDA HR+RR C+A+LVGV T++RDNPSL +RR+PL G++ QP RVVLDRTLR+ T+ +L DG ++V ++ + R V L P G GVDL+++LE L + G++ +LVEGGP V F+ E LVDRA+I+++P E S I+ L GL LV T+WG+D V+ W+RP L WP
Sbjct: 156 PLVTLKAAMDFNGVVD--GENPGRFTSEESLDAAHRLRRHCDAILVGVNTIIRDNPSLNIRRIPL--GKSGQPLRVVLDRTLRIP---------TEATVLNDGGETIVVHTQQSD-----RGVIL----------------------------------------PSGTG-GVDLSALLEHLGDI-----GIQELLVEGGPVVWAQFIEEGLVDRAIIIQSPNELGEGPRSGISDSKLSEVGLSLVEQTQWGEDSVQFWSRPELSWP 358
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: K0RZ71_THAOC (RibD_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ71_THAOC) HSP 1 Score: 174 bits (442), Expect = 5.030e-45 Identity = 114/279 (40.86%), Postives = 155/279 (55.56%), Query Frame = 3
Query: 426 VPSVTLKLAMDKNG--AVDDMSEGP-KRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 1253
V VTLK+A D + V D+SE +RFTS ESLD VHR+RR+ AVLVG GTV +D+ SLTVRRV L EGQ+ QP RVVLD TL + G + +L+DG +++++S+ E + R + DV DLV + +G+ + S E L + L RG+ H++VEGGP A+ FL +VDRA++VRAPV+F PVP+++ +TL RAGLE++GS G D +E W R G WP G WP
Sbjct: 119 VEGVTLKMAFDSSPEWGVADLSETKSERFTSPESLDMVHRLRRESSAVLVGRGTVEKDDCSLTVRRVKLNEGQS-QPIRVVLDPTLSILGGRKFT-------LLKDGLSTIIYHSS--EHNEDGRHLATSPDV------------------------------DLVEMTTGASGS--NCLSPREVLRD--LESRGLRHIMVEGGPATARAFLEAGVVDRAILVRAPVQFQIPVPAEMNEETLGRAGLEMIGSGDMGGDTIEYWVRKGSTWPAGE---WP 350 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14781.1 >prot_P-fluviatile_contig81.14781.1 ID=prot_P-fluviatile_contig81.14781.1|Name=mRNA_P-fluviatile_contig81.14781.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=400bp MRLDLVSSAATLGLLLEEVLPEFAFARRGSTEPLLARQPCSGAGATFVATback to top mRNA from alignment at P-fluviatile_contig81:313436..318426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig81.14781.1 ID=mRNA_P-fluviatile_contig81.14781.1|Name=mRNA_P-fluviatile_contig81.14781.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4991bp|location=Sequence derived from alignment at P-fluviatile_contig81:313436..318426+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig81:313436..318426+ >mRNA_P-fluviatile_contig81.14781.1 ID=mRNA_P-fluviatile_contig81.14781.1|Name=mRNA_P-fluviatile_contig81.14781.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2400bp|location=Sequence derived from alignment at P-fluviatile_contig81:313436..318426+ (Porterinema fluviatile SAG_2381)back to top |