prot_P-fluviatile_contig81.14781.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig81.14781.1
Unique Nameprot_P-fluviatile_contig81.14781.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length400
Homology
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: D7FMH2_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH2_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 4.120e-126
Identity = 245/421 (58.19%), Postives = 287/421 (68.17%), Query Frame = 0
Query:    1 MRLDLVSSAATLGLLLEEVLPEFAFA--RRGSTEPLLAR-QPCSGAGATF-------VATTDMTRTPAEVEKEG----------AAEVAPRATAGGDAXXXXXXXXXXXXXXRRGGNRGA--TSKATRFERGRSAMATGAAGAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            MRLD+ ++A    +L +E L EFA A  R+GS +  + R +P   + +++       VA T M R  A+  + G          +  VAP A A    XXX       XXXX      GA     ATRFERG +A+       + +PSVTLKLAMD+NGAVDDMSEGPKRFTS  SLDAVHRIRRDCEAVLVGVGTVVRD+PSLTVRRVPL  GQT QPTRVVLDRTLRLT  G  AGQ   RAILRDGH S+VFYSAGCE+ TEARA +LK DV+   +  A SDS G    +T     AP  +D VG+P +  GAGVDL+ VL AL E     RG++HVLVEGGP VA+GFLSE LVDRA+I+RAP+EF RPVPSDI +DTL+RAGLELVG T+WGDDE ECWTRPGL WPGG VG+WP
Sbjct:    1 MRLDVWTAAVAFSVLPQETLSEFAVAGRRQGSLDAGVFRVRPSCPSSSSYRGNSNGDVAATAMDRNIAKHHEAGPPRISSETTQSKHVAPAAAAAXXXXXXGRAGEAEXXXXXXXXXXGAPMAEGATRFERGGAAVTESRGRGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSPASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNGGQTRQPTRVVLDRTLRLT--GAQAGQNP-RAILRDGHSSLVFYSAGCED-TEARAAELKADVK--RSRTAVSDSPGETEPDTSHQKLAP--VDFVGMPVQRPGAGVDLSGVLGALLE-----RGIDHVLVEGGPSVARGFLSERLVDRAIIIRAPMEFVRPVPSDIATDTLRRAGLELVGCTKWGDDEAECWTRPGLGWPGGGVGSWP 408          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A836CBN8_9STRA (Riboflavin biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN8_9STRA)

HSP 1 Score: 250 bits (638), Expect = 5.650e-78
Identity = 144/286 (50.35%), Postives = 178/286 (62.24%), Query Frame = 0
Query:  114 MATGAAGAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            MA     A   P VTLKLA+D+ GAVDD SE PKRFTS ESLDAVHR+RRD  AV+VGV TVVRDNPSLTVRRVPL +GQ +QP RVVLDR LR+ E  +         +L DGHP+ V ++       +ARA +L   V GL                       P  ID   +P      G  L +V+  L +     RG+ H++VEGGP +A+ FLS+ LVDRA+IV+APV+F +PVPS I    L+ AGLEL+G+T+WG DEVECW++PGL WP G VG WP
Sbjct:    1 MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQ-QQPLRVVLDRNLRIPEADQCQ-------LLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGL-----------------------PVMID--DIPTDTPEDGCPLLTVVRFLGQ-----RGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 248          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A6U6BWZ9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BWZ9_GUITH)

HSP 1 Score: 192 bits (489), Expect = 7.680e-55
Identity = 116/281 (41.28%), Postives = 168/281 (59.79%), Query Frame = 0
Query:  122 KEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLP-PRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSR-PVPSDITSDTLQRAGLELVGSTR-WGDDEVECWTRPGLRWPGGRVGAWP 399
            +++P VTLK+A+D+NGAVDD+    KRFTS++SLDAVHR+RR  +AVLVG+GTVVRD+PSLTVRRVPL EG+ EQP R V+D +L++              ++RDG+ +V+F+S    +E + R +QL  ++E                +  V+F           +P P      +DL S+L  LS       GV+ +++EGGP   K FL + LVDRA+++ AP++F + PVPS I    L+ AGL L+G  + WG D V  W++  L+WP   +  WP
Sbjct:   75 EQLPIVTLKIALDENGAVDDLGITSKRFTSEQSLDAVHRLRRCSDAVLVGIGTVVRDDPSLTVRRVPLLEGR-EQPLRAVIDPSLKI---------EAHCKVMRDGYKTVIFHSDS--DEVDKRRIQLISELE---------------ATNQVSF-----------IPTPTNQHRSLDLTSILGELSNL-----GVKELMLEGGPATVKRFLQQKLVDRAIVIVAPIKFDQLPVPSLIDHHVLKAAGLALLGEHQDWGKDSVSLWSKAQLQWPSPVISEWP 312          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: I2CPJ6_NANGC (Riboflavin biosynthesis protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ6_NANGC)

HSP 1 Score: 189 bits (480), Expect = 3.400e-54
Identity = 124/282 (43.97%), Postives = 154/282 (54.61%), Query Frame = 0
Query:  120 GAKEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGV-EHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSR-PVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            G  E P VT+KLA+D+ GAVDD +  P RFT + SLDAVHR+RR+ EAV+VGV TVVRD+PSLTVRRVPLR  Q  QP RVVLDR+LR+              +L D H ++V+Y  G      A  + L   V                         AP  ID +  P        D A +LE L    L   GV EH++VEGGPR AK FL  + VDRAVI  A +EF   P+PS +  + L++AGL  +GS   G D V CW+RP L WP   +  WP
Sbjct:   16 GKGERPRVTVKLAVDRKGAVDDATLKPGRFTCEASLDAVHRLRRESEAVVVGVETVVRDDPSLTVRRVPLRPDQ-RQPIRVVLDRSLRIPYSS---------TLLNDRHRTLVYYVQGPWRHMRAADIMLSKFV-------------------------APVLIDCINEPEL---RPEDPAPLLEVLGR--LYDMGVREHIMVEGGPRTAKAFLDAACVDRAVIFEAAMEFKGDPIPSGVDENVLKKAGLMYLGSYPSGVDMVHCWSRPDLPWPAQELSDWP 257          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A832V5V4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=2 Tax=Archaea TaxID=2157 RepID=A0A832V5V4_9ARCH)

HSP 1 Score: 189 bits (479), Expect = 1.370e-52
Identity = 114/276 (41.30%), Postives = 156/276 (56.52%), Query Frame = 0
Query:  124 VPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            +P VTLK+A+DKNGAVDD +E   RFTSQESLDAVHR+R+D +A++VGVGTV+RDNPSLTVRR+ L EG+  QP RVVLDR L+            D  I+ D H +++F+  G EE+  A  +  +++VE     +A + S                              GVDL  +L  L +     RG + VL+EGGP  A+ FL+   VDR V+++A V+FS+P P  +  +    AGL+ +    WG D V  W++ GL WP   V  WP
Sbjct:  155 IPLVTLKVAIDKNGAVDDRAEDSFRFTSQESLDAVHRLRKDVDAIIVGVGTVLRDNPSLTVRRIELGEGK--QPLRVVLDRELKTP---------IDSIIVNDDHDTLIFHVEGREEKIAA--LNSRNNVEVHKLQSARNHS------------------------------GVDLHLLLSLLGD-----RGYQEVLLEGGPETARRFLAAETVDRVVLIKADVDFSQPFPLSLGDEDFSAAGLQRLSDVHWGVDTVSRWSKAGLGWP---VDGWP 379          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A842P3K4_9EURY (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842P3K4_9EURY)

HSP 1 Score: 180 bits (457), Expect = 1.740e-49
Identity = 107/270 (39.63%), Postives = 151/270 (55.93%), Query Frame = 0
Query:  122 KEVPSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWP 391
            K +P VTLK+A+D NGAVDD +E   RFTS+ESL+AVHR+R+D +A++VG+GT++RDNPSLTVRR+ +  G  +QP RV+LDR L+            D  I+ DGH +++ +  G E E                   AA DS      ETV   +  SA            +GVDL  +L  L +     RG + VL+EGGP  A+ F++  LVDR +I++   +FS+  P  +  D  + AGL  +G + WG D V+ W+R  L WP
Sbjct:  141 KRIPLVTLKIAVDSNGAVDDRAEDSFRFTSEESLNAVHRLRKDVDAIIVGIGTIIRDNPSLTVRRIEM--GLGKQPLRVILDRELKTP---------LDSTIVNDGHNTLILHVEGREGEI------------------AALDS-----RETVEVQKLQSARS---------HSGVDLHLLLSLLGD-----RGFQEVLLEGGPETARRFIAAGLVDRLIIIQTKAQFSQGFPLSLGDDDFRNAGLVRLGDSEWGGDSVQRWSREDLNWP 362          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A0G4F4C9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F4C9_VITBC)

HSP 1 Score: 175 bits (444), Expect = 2.780e-48
Identity = 119/315 (37.78%), Postives = 170/315 (53.97%), Query Frame = 0
Query:  125 PSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEAR---------------------AVQLK----------DDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAG-------AGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAP-VEFS-RPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            P VT+KLA+D+NGAVDD+   P+RFT  E+LD VHRIR   + V+VGV T++RD+  LTVRRVPL  GQ+ QP RVVLD +LR+ +         D  +L D + +VVF ++  ++   A                       ++ K          D++E ++      D    K  E +  G++P +  L  +PP            G+DL ++L+ L        GV+H +VE GPR+   FL++ LVDR V+VRA  VEF  +P+PS +T+ TLQRAGL+ V    WG DEV  W+R G+ WP     +WP
Sbjct:    8 PEVTVKLAVDRNGAVDDLKIAPERFTCSEALDKVHRIRLASDCVIVGVNTIIRDDAQLTVRRVPLAPGQS-QPLRVVLDPSLRIPK---------DAQVLTDEYSTVVFCASATDDPLLALNPPPSRRGDLVAPPAFASSRPTLKTKSGVSVDRVWLDEIEEMMEG----DQQKRKRWEALFGGQSPPSKILRLIPPATGQFARADRRIGLDLRALLDHLGRDF----GVKHAMVEAGPRLVDSFLTQGLVDRLVVVRATSVEFQGQPLPSHVTAATLQRAGLQQVARGVWGADEVTYWSRKGIPWPTDDPASWP 304          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A7S2LDW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDW0_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.680e-48
Identity = 117/281 (41.64%), Postives = 154/281 (54.80%), Query Frame = 0
Query:  123 EVPSVTLKLAMDKNGA--VDDMSEGP-KRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPG-GRVGAWP 399
            +V  VTLK+A D +    V D+SE   +RFTS ESLD VHR+RRD  AVLVG GTV  D+ SL+VRRV L EGQ EQP RV+LD +L L  G        + AI  DG  ++V+YS    +  +   +   DD    +  A + D    K         +PS I              DLA+            RG+ H++VEGGP  A+ FL   +VDRA++VRAPVEF  PVP+ +  DT++ AGL ++G+T  G D VE WTR GL WP    + +WP
Sbjct:   59 KVTGVTLKMAFDSSPVWGVADLSETKSERFTSPESLDMVHRLRRDSSAVLVGRGTVEFDDCSLSVRRVELGEGQ-EQPVRVILDPSLSLVGG--------EYAIFNDGLRTIVYYSQSAAQNKDVP-LPSSDDCVIFVPLAQSDDEKNDKIPSL-----SPSEIVQ------------DLAT------------RGLTHIMVEGGPATARAFLHSGVVDRAILVRAPVEFQEPVPAQMDEDTMKTAGLNMIGTTEMGGDVVEYWTREGLEWPNPDDLSSWP 300          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: A0A6V8EGV0_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=4 Tax=Archaea TaxID=2157 RepID=A0A6V8EGV0_9ARCH)

HSP 1 Score: 175 bits (444), Expect = 1.270e-47
Identity = 109/267 (40.82%), Postives = 144/267 (53.93%), Query Frame = 0
Query:  125 PSVTLKLAMDKNGAVDDMSEGPKRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWP 391
            P VTLK AMD NG VD   E P RFTS+ESLDA HR+RR C+A+LVGV T++RDNPSL +RR+PL  G++ QP RVVLDRTLR+          T+  +L DG  ++V ++   +     R V L                                        P   G GVDL+++LE L +      G++ +LVEGGP V   F+ E LVDRA+I+++P E      S I+   L   GL LV  T+WG+D V+ W+RP L WP
Sbjct:  156 PLVTLKAAMDFNGVVD--GENPGRFTSEESLDAAHRLRRHCDAILVGVNTIIRDNPSLNIRRIPL--GKSGQPLRVVLDRTLRIP---------TEATVLNDGGETIVVHTQQSD-----RGVIL----------------------------------------PSGTG-GVDLSALLEHLGDI-----GIQELLVEGGPVVWAQFIEEGLVDRAIIIQSPNELGEGPRSGISDSKLSEVGLSLVEQTQWGEDSVQFWSRPELSWP 358          
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Match: K0RZ71_THAOC (RibD_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ71_THAOC)

HSP 1 Score: 174 bits (440), Expect = 3.550e-47
Identity = 114/279 (40.86%), Postives = 155/279 (55.56%), Query Frame = 0
Query:  124 VPSVTLKLAMDKNG--AVDDMSEGP-KRFTSQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRVVLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLKDDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLASVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFSRPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP 399
            V  VTLK+A D +    V D+SE   +RFTS ESLD VHR+RR+  AVLVG GTV +D+ SLTVRRV L EGQ+ QP RVVLD TL +  G +         +L+DG  +++++S+  E   + R +    DV                              DLV +    +G+  +  S  E L +  L  RG+ H++VEGGP  A+ FL   +VDRA++VRAPV+F  PVP+++  +TL RAGLE++GS   G D +E W R G  WP    G WP
Sbjct:  119 VEGVTLKMAFDSSPEWGVADLSETKSERFTSPESLDMVHRLRRESSAVLVGRGTVEKDDCSLTVRRVKLNEGQS-QPIRVVLDPTLSILGGRKFT-------LLKDGLSTIIYHSS--EHNEDGRHLATSPDV------------------------------DLVEMTTGASGS--NCLSPREVLRD--LESRGLRHIMVEGGPATARAFLEAGVVDRAILVRAPVQFQIPVPAEMNEETLGRAGLEMIGSGDMGGDTIEYWVRKGSTWP---AGEWP 350          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMH2_ECTSI4.120e-12658.19RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836CBN8_9STRA5.650e-7850.35Riboflavin biosynthesis protein n=1 Tax=Tribonema ... [more]
A0A6U6BWZ9_GUITH7.680e-5541.28Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
I2CPJ6_NANGC3.400e-5443.97Riboflavin biosynthesis protein n=1 Tax=Nannochlor... [more]
A0A832V5V4_9ARCH1.370e-5241.30Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A842P3K4_9EURY1.740e-4939.63Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A0G4F4C9_VITBC2.780e-4837.78Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2LDW0_9STRA9.680e-4841.64Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6V8EGV0_9ARCH1.270e-4740.82Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
K0RZ71_THAOC3.550e-4740.86RibD_C domain-containing protein n=1 Tax=Thalassio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR002734Bacterial bifunctional deaminase-reductase, C-terminalPFAMPF01872RibD_Ccoord: 125..350
e-value: 3.0E-26
score: 92.5
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 125..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig81contigP-fluviatile_contig81:313492..317495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig81.14781.1mRNA_P-fluviatile_contig81.14781.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig81 313436..318426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig81.14781.1 ID=prot_P-fluviatile_contig81.14781.1|Name=mRNA_P-fluviatile_contig81.14781.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=400bp
MRLDLVSSAATLGLLLEEVLPEFAFARRGSTEPLLARQPCSGAGATFVAT
TDMTRTPAEVEKEGAAEVAPRATAGGDAAAAAAAAAAAAATGRRGGNRGA
TSKATRFERGRSAMATGAAGAKEVPSVTLKLAMDKNGAVDDMSEGPKRFT
SQESLDAVHRIRRDCEAVLVGVGTVVRDNPSLTVRRVPLREGQTEQPTRV
VLDRTLRLTEGGRHAGQRTDRAILRDGHPSVVFYSAGCEEETEARAVQLK
DDVEGLLAAAAASDSLGGKTSETVTFGRAPSAIDLVGLPPRCAGAGVDLA
SVLEALSEASLMFRGVEHVLVEGGPRVAKGFLSESLVDRAVIVRAPVEFS
RPVPSDITSDTLQRAGLELVGSTRWGDDEVECWTRPGLRWPGGRVGAWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002734RibDG_C
IPR024072DHFR-like_dom_sf