mRNA_P-fluviatile_contig81.14762.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig81.14762.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI) HSP 1 Score: 506 bits (1304), Expect = 8.350e-157 Identity = 468/1106 (42.31%), Postives = 569/1106 (51.45%), Query Frame = 1
Query: 1 MPNLAFSPV-PQQPARQERG-GEKENL--ASTPLAMAGDGGGSMMDSGKSTSRSPSPGSASRSPLEAIVAPAAPVPSNGAGT-VICKRSSSCKCPDCNMAASVFGIEQLRQLSGGXXXXGVARSPLTKG---SNGMECADKNVTASEPATDVEA------------APAGDSLELASAGVLTLVYPPPTPLARSIRPCFSRFVFPDASRRLFDRYQGVRGVLVEDRTTAA--ASIGRKGVVGTSAAEATASQGTTVAA----SGGSKKKAGAGWGFRMARAVFSPLSPKKKEVSGGSNVESGASISALTDELDGGAITASAFAVAAAAAVPQQEPAVEGALPVEESTPAGDDSSGGKTEGVNSGDDLXXXXXXXXXXEDGDEGAAPAAREQGDAATAAVEDAAGDTVVGDKSGDAAENNVI------------------------------------------------------VSAFAGPEPAVVQGEGASRRPSRGRRLSKDVFFECSTEVRELRERASSCCRREKACRQSVEHVLTSDSEPDNGKDD-----DRGNLFAKEQADDPPAXXXXXXXXXXXXXXXXSNSGDVTSVPVTAPTAITPAITAAGGSESTTTAGDSAPAEEGEGDTLPHSRLAAKHVSGYFTFVGGGAEKLGAQSLSLSFPLSRF---VSTCRSLVVSCLVTVPAAKSCAAAGSRTEIPTEGGAAPAAGVDLKTAGS-----QPQGAAARGVPG-GRRRNRRQAPQLALGMADAYGHEDDRAKFSQAEVDAKIKERLSEERAEFEKTVSALKGAHEAELRSAEEKLQRYSSDGNRAKMAARDAEALEREIAMLSERYGEAAAEAKSNRKVLLEKEALLDAVTAQARDNLMGLKTDLNAARAERAAEKQAMKESMDTERRARSLAEGRLQQLETAYNKLEDSERDKRAAGILKMKQDMQALAHAQFAEANKKHVVLKARLERSEARVKLLEGAGGEKDSKIEAVERKNDELRAQVVSLQKAKAESAESASRRERLLQDEVSSLRDEAKARLAEWEAMVRERDAANNGRDVSQDALARMAIRNTQMKESVADLEGKVKELEGFCTEALDQLDAERAKTPR 3036
MPNLAFSPV PQQP +RG GEKEN AS+P GS+ K + +P+ + RSPLE++ A GT ++CKR S+CKCPDC+MAA+VF I LRQ+ GG G+ SP G +G+ + DV APAG+ A V+ PP P + + V A+R + + A++ ++ A TA+ G T AA S GSKKK GWGFRMARAVFSPLSP++K+ + +AL ELD A AAAA P P VE VE S A XXXXXX A + G+ A D D + GD+S + F G GRRLSKD +FECS+EV EHVL SDSE D+G D + EQ + PA +NS ++S AP + E D+ P + L A + V G E G + S P + V+ V PA ++ A + P EG A D K G+ Q Q ARG+ G GRRRNRRQ QL LGMA+AYGHED RAKFSQAEVDAKIKERL+EE++ FEKTVS LK HEA+L++A +KLQ+ SSDGNRAK+AARDAEALEREIAMLSERYGEAAAEAK + K+LLEKEALLDAVTAQ LMGLK+DL RAE AAEKQ M E+ D+ERRARSLAE RLQQLE AYNKLEDSER+KRAAGILKMK DM+ALA QFA ANK+H L+ARLERSEA+ +LLE A E ++K+E +K+ EL QV +LQ K E+A SASRRE +LQ E ++LR++A++RL E EAM RERDAAN+GRDVSQDALARMAIRNTQ+KESVADLEGKVKELEGFCTEALD+LD E+ K +
Sbjct: 1 MPNLAFSPVGPQQPPLHDRGSGEKENANAASSPPV------GSIT---KKAAVAPAGSTVVRSPLESLAA----------GTSIVCKRDSTCKCPDCDMAAAVFDINDLRQVGGGG---GIPSSPTAGGIPPPSGVXXXXXXXXXGGASRDVARDDHDGALPTWTPAPAGEGEGRQEAAVM-----PPKPAVAVVDSPAASPVPDSAARNVPHNAKKADMTATSSAPDGEHDAAVHKQPGESCGGASETAAGGETPAAASAKSAGSKKK---GWGFRMARAVFSPLSPRRKQQGDAGGDGKSGTTAALAGELDD-------EATAAAAGAP---PLVE--TTVELSATAXXXXXXXXXXXXXXXXXXXXXXXXDNEIPSSAGAGMGAGGKHGNTGAADGNDGNDDLLSGDESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVFLGERXXXXXXXXXXXXS--GRRLSKDRYFECSSEV---------------------EHVLASDSESDSGDKDVDPSSSKEQALESEQTSEQPAPPVNE-----------TNSDRISSSLAAAPXXXXXXXXXXXXXXXXXXXXXMSLLPVVEADS-PAAALEAAVAAAKAADVNGDVEPGGITVAADSAPSQKVLVRVAPGEETDVDVGAAAPADEATATQAATATYPPEGSGGEANAHDGKEKGAAQDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQSAFEKTVSGLKSTHEADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKILLEKEALLDAVTAQ----LMGLKSDLATTRAEHAAEKQRMTETADSERRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAASASRREHVLQQEATALRNDAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKVKNAK 1025
BLAST of mRNA_P-fluviatile_contig81.14762.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 1.850e-154 Identity = 472/1121 (42.11%), Postives = 580/1121 (51.74%), Query Frame = 1
Query: 1 MPNLAFSPV-PQQPARQERG-GEKENL--ASTPLAMAGDGGGSMMDSGKSTSRSPSPGSASRSPLEAIVAPAAPVPSNGAGT-VICKRSSSCKCPDCNMAASVFGIEQLRQLSGGXXXXG---------------VARSPLTKGSNGMECADKNVTASEPATDVEA---APAGDSLELASAGVLTLVYPPPTPLARSIRPCFSRFVFPDASRRLFDRYQGVRGVLVEDRTTAAA-----SIGRKGVVGTSAAEATASQGTTVAA----SGGSKKKAGAGWGFRMARAVFSPLSPKKKEVSGGSNVESGASISALTDELDGGAI---------------TASAFAVAAAAAVPQQEPAVEGALPVEESTPAGDDSSGGKTEGVNSGDDLXXXXXXXXXXEDGDEGAAPAA-----------------------------------REQGDAATAAVEDAAGDTVVGDKSGDAAENNVIVSAFAGPEPAVVQGEGASRRPSRGRRLSKDVFFECSTEVRELRERASSCCRREKACRQSVEHVLTSDSEPDNGKDD-----DRGNLFAKEQADDPPAXXXXXXXXXXXXXXXXSNSGDVTSVPV----------------TAPTAITPAITAAGGSESTTTAGDSAPAEEGEGDTLPHSRLAAKHVS----GYFTFVGGGAEKLGAQSLSLSFPLSRFVSTCRSLVVSCLVTVPAAKSCAAAGSRTEIPTE-GGAAPAAGVDLKTAG---SQPQGAAARGVPG-GRRRNRRQAPQLALGMADAYGHEDDRAKFSQAEVDAKIKERLSEERAEFEKTVSALKGAHEAELRSAEEKLQRYSSDGNRAKMAARDAEALEREIAMLSERYGEAAAEAKSNRKVLLEKEALLDAVTAQARDNLMGLKTDLNAARAERAAEKQAMKESMDTERRARSLAEGRLQQLETAYNKLEDSERDKRAAGILKMKQDMQALAHAQFAEANKKHVVLKARLERSEARVKLLEGAGGEKDSKIEAVERKNDELRAQVVSLQKAKAESAESASRRERLLQDEVSSLRDEAKARLAEWEAMVRERDAANNGRDVSQDALARMAIRNTQMKESVADLEGKVKELEGFCTEALDQLDAERAK 3027
MPNLAFSPV PQ P +RG GEKEN AS+P GS+ K + + + + RSPLE++ A GT ++CKR S+CKCPDC+MAA+VFGI LRQ++GG +ARSPL G++ ++V +P + APA + L A V+ PP P + + V PD++ R D V+ V +A A ++ ++ + A TA+ G T AA S GSKK GWGFRMARAVFSPLSP+K T A P + +P GD G T + DDL XXXXXX R+ D AT D +G++S A+RR S GRRLSKD FFECS+EV EHVL SDSE D+G D + EQA + P XXXXXXXX P ++ + A + + A +A + D P A + + G V GGA G ++ + A + T P GG A A K+A +Q Q ARG+ G GRRRNRRQ QL LGMA+AYGHED RAKFSQAEVDAKIKERL+EE+A FEKTVSALK H+A+L++A +KLQ+ SSDGNRAK+AARDAEALEREIAMLSERYGEAAAEAK + K+LLEKEALLDAVTAQ LMGLK+DL RAE AAEK+ M E+ D+ERRARSLAE +LQQLE AYNKLEDSER+KRAAGILKMK DM+ALA QFA ANK+H L+ARLERSEA+++LLE A + ++K+E +K+ ELR QV +LQK KAE+A +ASRRE +LQ E ++LR+EA++RL E EAM RERDAANNGRDVSQDALARMAIRNTQ+KESVADLEGKVKELEGFCTEALD+LD E+AK
Sbjct: 1 MPNLAFSPVGPQHPPLHDRGSGEKENAHTASSPPV------GSVT---KKATVAAAGSTVVRSPLESLTA----------GTSIVCKRDSTCKCPDCDMAAAVFGINDLRQVAGGGGIPSSPTASGIPPPSXXXALARSPLAGGAS------RDVARDDPDGALPTWTPAPAVEGEGLQEAAVM-----PPKPAVAGVDSPAAPPV-PDSAAR--DVPPSVKKADVTAMPSAPADERDAAVHKQPGESSGGASETAAGGETPAAASAKSAGSKK----GWGFRMARAVFSPLSPRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPLVETTVEPAAXXXXXXXXXLAPPADNEIPSSAGAGMGDGGKHGNTGAADGNDDLLSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPRDSNDTATGGAACGGMDVFLGERSA-----------------------AAARRASSGRRLSKDRFFECSSEV---------------------EHVLASDSESDSGDKDVDPFSSKEQASESEQAAEQPTSPVNETNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSATPMSLLSVVEADSPAAALEAAVATAKVADVNRDVEPRGMTVAANSAPSQKGEEADVDGGAAAPGDEATATQ-----------------------------AATATHTPERSGGEADAHDGKEKSAARDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQAAFEKTVSALKATHDADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKMLLEKEALLDAVTAQ----LMGLKSDLATTRAEHAAEKRRMTETADSERRARSLAESKLQQLEAAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQIRLLEEAAKDLNAKLETAGQKSTELRGQVEALQKEKAEAAANASRREHVLQQEATALRNEAESRLDEMEAMARERDAANNGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKAK 1007 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14762.1 >prot_P-fluviatile_contig81.14762.1 ID=prot_P-fluviatile_contig81.14762.1|Name=mRNA_P-fluviatile_contig81.14762.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1023bp MPNLAFSPVPQQPARQERGGEKENLASTPLAMAGDGGGSMMDSGKSTSRSback to top mRNA from alignment at P-fluviatile_contig81:17575..28334- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig81.14762.1 ID=mRNA_P-fluviatile_contig81.14762.1|Name=mRNA_P-fluviatile_contig81.14762.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10760bp|location=Sequence derived from alignment at P-fluviatile_contig81:17575..28334- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig81:17575..28334- >mRNA_P-fluviatile_contig81.14762.1 ID=mRNA_P-fluviatile_contig81.14762.1|Name=mRNA_P-fluviatile_contig81.14762.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6138bp|location=Sequence derived from alignment at P-fluviatile_contig81:17575..28334- (Porterinema fluviatile SAG_2381)back to top |