prot_P-fluviatile_contig80.14720.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig80.14720.1
Unique Name	prot_P-fluviatile_contig80.14720.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	167

Homology

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: D7FQJ9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQJ9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.700e-98
Identity = 141/165 (85.45%), Postives = 149/165 (90.30%), Query Frame = 0

Query:    1 MEFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            MEFAGG+ GADGPEP SKNFDP G +EARPENLLFFRE+EIKHGRIAMLAI GLI PEFVRVPG+IYQ VSVLDAHN MVEKGPMWQLLFWIS  EIIL PTVIDMDKKDREPGDF LDPLNLCKTPEK EKYKL+ELK+GRLAM+A  GALTQMAM GHG+PFL
Sbjct:   38 MEFAGGLRGADGPEPNSKNFDPFGFSEARPENLLFFREAEIKHGRIAMLAICGLIAPEFVRVPGEIYQDVSVLDAHNVMVEKGPMWQLLFWISLAEIILFPTVIDMDKKDREPGDFALDPLNLCKTPEKTEKYKLAELKHGRLAMMAVSGALTQMAMFGHGYPFL 202

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A835ZCB2_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB2_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.980e-84
Identity = 118/165 (71.52%), Postives = 141/165 (85.45%), Query Frame = 0

Query:    1 MEFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            MEFAGG+LGADGPEP +KNFDPLGLAE  P+ +LF+RE+E+KHGRIAMLA++G++VP FVR+PGDIYQGVSV++AHNAMVEKGPM QLLFW+S  EII  P   +M  KDREPGDF+LDPL  CK PEK ++Y+LSELKNGRLAMLA  G +TQ  +TGHGFP+L
Sbjct:   42 MEFAGGLLGADGPEPTTKNFDPLGLAEKNPDAVLFYREAELKHGRIAMLAVLGMVVPNFVRLPGDIYQGVSVVEAHNAMVEKGPMVQLLFWLSLFEIITAPLTWNMQAKDREPGDFSLDPLGFCKDPEKKKRYQLSELKNGRLAMLAFSGMITQAVLTGHGFPYL 206

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A835Z019_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z019_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.410e-75
Identity = 108/165 (65.45%), Postives = 136/165 (82.42%), Query Frame = 0

Query:    1 MEFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            MEFAGG++GADGPEP +KNFDPLGLAE    ++LF+RE+E+KH R+AMLA+VG++VP FVR+PGDI+QGV+V+DAHN MVEKGPM  +LFW+S  E++  P   +M +KDREPGDF LDPL  CK PEK ++Y+LSELKNGRLAMLA  G +TQ  +TGH FP+L
Sbjct:   41 MEFAGGLIGADGPEPTTKNFDPLGLAEKG--DVLFYREAELKHCRLAMLAVVGMVVPNFVRLPGDIFQGVNVVDAHNLMVEKGPMVMVLFWVSLFELLTAPLTWNMAEKDREPGDFMLDPLGFCKDPEKKKRYQLSELKNGRLAMLAFSGMITQAVLTGHDFPYL 203

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A7R9U7U0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7U0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.220e-74
Identity = 110/165 (66.67%), Postives = 133/165 (80.61%), Query Frame = 0

Query:    1 MEFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            M+FAGG++G DGPEP SKNFDPLGLAE  PE + +FRE+EIKHGRI MLA +G+IVPEF R+PGDI+Q V+V+DAHN MV KGPM+ LLFWIS  EII  PT+  +D+  REPGDF  DPL+L K P+K ++Y L+ELKNGRLAMLA  G +TQ A+T HGFPFL
Sbjct:   33 MDFAGGLIGGDGPEPFSKNFDPLGLAEKSPELIPYFREAEIKHGRICMLATLGMIVPEFARLPGDIFQKVNVVDAHNEMVSKGPMYMLLFWISLWEIISLPTIKQLDE-GREPGDFAFDPLSLGKNPDKMKRYALAELKNGRLAMLAFSGMITQAALTNHGFPFL 196

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A7S1XSJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSJ2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.630e-65
Identity = 99/164 (60.37%), Postives = 126/164 (76.83%), Query Frame = 0

Query:    2 EFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            EFAGG+LG DGPEP S+ FDPLGLA+  P  + +FRE+EIKHGRI MLA +G+IVPEF+R+PGDI+QGV  + AH+AMV KGPM+ LL WI   E++  PT+  +D+  R PGDF  DPL+L K PEK ++Y L+ELKNGRLAML   G +TQ A+T +GFP+L
Sbjct:  104 EFAGGLLGGDGPEPNSRQFDPLGLADKNPNMIKYFREAEIKHGRICMLATLGMIVPEFMRLPGDIFQGVDAIGAHDAMVAKGPMYMLLIWIGVWELVSFPTIAALDE-GRMPGDFAFDPLSLGKNPEKLKRYSLAELKNGRLAMLGFSGMITQAALTHNGFPYL 266

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A0G4H306_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H306_VITBC)

HSP 1 Score: 202 bits (513), Expect = 3.940e-63
Identity = 97/158 (61.39%), Postives = 120/158 (75.95%), Query Frame = 0

Query:    7 MLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPF 164
            M+G DGPEP S+NFDPLGLAE  P+ L FFRE+EIKHGRIAMLA++G++VP F  +PG   +G+SVL AH+  VE G M QLLFW+S  EI+   TV+DMD+KDREPGDF++DP    +TPE+A   +  ELKNGRLAMLA  G +TQ A+TG  FPF
Sbjct:   52 MVGGDGPEPFSRNFDPLGLAEQFPQYLTFFREAEIKHGRIAMLAVLGMVVPSFWTLPGR--EGISVLAAHDKFVENGVMGQLLFWVSLWEIVTFKTVVDMDEKDREPGDFSMDPFGWTRTPERARVLRTQELKNGRLAMLAFSGMITQAALTGKNFPF 207

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A7S1U797_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U797_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.830e-61
Identity = 93/157 (59.24%), Postives = 119/157 (75.80%), Query Frame = 0

Query:    9 GADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            G DGPEP S+ FDPLGLA+  P  + +FRE+EIKHGRI MLA +G+IVPEF+R+PGDI+QGV  + AH+AMV KGPM+ LL WI   E++  PT+  +D+  R PGDF  DPL+L K PEK ++Y L+ELKNGRLAML   G +TQ A+T +GFP+L
Sbjct:   31 GGDGPEPNSRQFDPLGLADKNPNMIKYFREAEIKHGRICMLATLGMIVPEFMRLPGDIFQGVDAIGAHDAMVAKGPMYMLLIWIGVWELVSFPTIAALDE-GRMPGDFAFDPLSLGKNPEKLKRYSLAELKNGRLAMLGFSGMITQAALTHNGFPYL 186

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A7S1UUQ5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUQ5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.800e-50
Identity = 90/173 (52.02%), Postives = 122/173 (70.52%), Query Frame = 0

Query:    3 FAGGMLGADGPEPL------SKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQG---VSVLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLC-KTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            FAGGM+G +GPEP+      S NFDP+G AE  PE L ++RE+E+KH R AMLA VG++VPEFVR+PG+ +      +VL AH+A+ +   M Q+  WISF+E    P + +M+  DR PGDF  DPL+L  + PEK ++ +LSELKNGRLAM+A GG ++  A+TGHGFP+L
Sbjct:   31 FAGGMVGGEGPEPMPFAKGSSVNFDPVGFAERSPEWLPWYREAELKHCRAAMLATVGMVVPEFVRIPGEQFSFDAIPNVLQAHDALPDS--MIQIFGWISFLEACTFPALANMNSYDRAPGDFGFDPLSLFPEDPEKQKEMQLSELKNGRLAMIAIGGMVSGAAVTGHGFPYL 201

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: A0A7R9WPE2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPE2_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.080e-50
Identity = 88/175 (50.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query:    2 EFAGGMLGADGPEPL-------SKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVSV---LDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLCKTPEKA-EKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            EFA G++G +GPEP+       S N+DP G  E  PE + +FRE+E+KHGR AMLA VG++VPEFVR+PG+ +   S+   +DAH+A+ +   M Q+  WISF+E    P + +M+  DR+PGD++ DPL      E A E+ KL ELKNGRLAM+A GG +TQ  MTGHGFP+L
Sbjct:   33 EFANGLVGGEGPEPIPFSSQGSSVNWDPCGFTERAPEWVPWFREAELKHGRAAMLATVGIVVPEFVRIPGEQFSFESIPNIIDAHDALPDS--MIQIFAWISFIEACTFPALANMNNYDRQPGDYSFDPLGFFPEDEAAQERIKLVELKNGRLAMIAIGGMVTQATMTGHGFPYL 205

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BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Match: B7G502_PHATC (Protein fucoxanthin chlorophyll a/c protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G502_PHATC)

HSP 1 Score: 168 bits (425), Expect = 8.190e-50
Identity = 91/174 (52.30%), Postives = 118/174 (67.82%), Query Frame = 0

Query:    2 EFAGGMLGADGPEPL------SKNFDPLGLAEARPENLLFFRESEIKHGRIAMLAIVGLIVPEFVRVPGDIYQGVS---VLDAHNAMVEKGPMWQLLFWISFMEIILTPTVIDMDKKDREPGDFNLDPLNLC-KTPEKAEKYKLSELKNGRLAMLACGGALTQMAMTGHGFPFL 165
            EF  G +G +  EP+      SKNFDPLGL E  PE + +FRESE+KHGR AMLA+ G +VPEFVRVPG+ Y   +   V+DAH+A+ +   M Q+  WISF+E +  P + +M++ DR PGDF  DPL L  K   K E+ +L ELKNGRLAM+A GG +T  A+TGHGFP+L
Sbjct:   35 EFCRGYVGGESVEPMFIGKTGSKNFDPLGLTEKVPEWVPWFRESELKHGRAAMLAVAGFVVPEFVRVPGEAYSFAAIPNVIDAHDALPQA--MIQIFAWISFVEAVSFPALANMNEFDRVPGDFGFDPLKLYPKDAAKQEQMQLKELKNGRLAMVAIGGMVTGSAITGHGFPYL 206

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig80.14720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQJ9_ECTSI	1.700e-98	85.45	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
A0A835ZCB2_9STRA	1.980e-84	71.52	Light harvesting complex protein n=1 Tax=Tribonema...	[more]
A0A835Z019_9STRA	2.410e-75	65.45	Light harvesting complex protein n=1 Tax=Tribonema...	[more]
A0A7R9U7U0_9STRA	2.220e-74	66.67	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S1XSJ2_9STRA	4.630e-65	60.37	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A0G4H306_VITBC	3.940e-63	61.39	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A7S1U797_9STRA	3.830e-61	59.24	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S1UUQ5_9STRA	1.800e-50	52.02	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]
A0A7R9WPE2_9STRA	4.080e-50	50.29	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
B7G502_PHATC	8.190e-50	52.30	Protein fucoxanthin chlorophyll a/c protein n=3 Ta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 8..164 e-value: 5.2E-37 score: 129.4
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 12..155 e-value: 1.0E-34 score: 120.4
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 18..164
None	No IPR available	PANTHER	PTHR21649:SF7	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 18..164
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..64
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 65..83
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 143..165
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 166..166
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 105..142
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 84..104
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 11..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig80	contig	P-fluviatile_contig80:87184..89774 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig80.14720.1	mRNA_P-fluviatile_contig80.14720.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig80 85645..89882 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig80.14720.1 ID=prot_P-fluviatile_contig80.14720.1|Name=mRNA_P-fluviatile_contig80.14720.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=167bp
MEFAGGMLGADGPEPLSKNFDPLGLAEARPENLLFFRESEIKHGRIAMLA
IVGLIVPEFVRVPGDIYQGVSVLDAHNAMVEKGPMWQLLFWISFMEIILT
PTVIDMDKKDREPGDFNLDPLNLCKTPEKAEKYKLSELKNGRLAMLACGG
ALTQMAMTGHGFPFLG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln