prot_P-fluviatile_contig80.14709.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig80.14709.1
Unique Name	prot_P-fluviatile_contig80.14709.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	662

Homology

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: A0A6H5KVG3_9PHAE (HECT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVG3_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 2.350e-90
Identity = 281/729 (38.55%), Postives = 325/729 (44.58%), Query Frame = 0

Query:    1 MSSPSSYDDDS--RGDNSTCSLVTTCTQCIE----GAAGCLWCSVPIDSAG--FGRGKCLSRGEAQDSCEIGELQATCQEGAGWYVLLLTLSXXXXXXXXLTMARKFAAMWHERWWLSAGGELATPLLDEEGEEQQHSVIFRSSLVDATGRGGSWRCPVCGFDNRPRCKHCDLCGISSEFAEVCVFSLSPSSGPPVRTTALR--NTALSFGVFGGPQITKSPLQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSG---WLIRYMHANGAEKRRESMGER--GCERVTSTLSG--------------LFLQVCQTHDRLPDFPPCVSLVRPAGWRVNSGVGGDASRQTESGAGAGYSAGRRVGAALGTEAAGGGKPRAAPSRLLRP-GTLTERQKRARRRRIWQRVIGPDGKLRWLQNLASPAISPAAMPPATGAGTSTAGTGYHPPSVVPVPRSSXXXXXXXXXXXXARPFGEGEERGRATGVGGVPAA-------AAAVLRYWTTSLSRGRPEGPAAAASTLDRTEPAEVQQAGAVASPAATADAAIGVPGEGNGGGEEESLLSAVERGE-----------------------------GEWRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKEKVSTAVKTTTAAGVAAAAEVGTRPRRDSFGDEVMMSKCPGYYATFLE-GGGLALDEARDGELVIQ---PNPLPPSATRKGPAAGE 659
            MSS   +DDDS  +  NSTCS   TC  C++    G  GCLWC+VP D +    G G C+ R  AQDSCE GELQATCQEGAGWYVL+LTLS   XXXXX TMARKF AMWHERWWL++GG+LA PLLD   EEQQH VIFRSSL D+ G   SWRCPVCGFDNRP CKHCDLCG+SSEFAE   +    +S P    T  +   T++  G  G     + P             AGE        E  + D   G     +  M A G    RE +G+   G +   S ++                                           V  GVGGD           GY + RRVGA+LG E   G KPRAAP R +R  G LTERQKR    RIWQRVIGPDGK+RWLQ+L SPA   A                             XXX         A     G  RGR TG  GV          A+AVLRYWT+       E   A       TEP    Q                         E ES LSA ERGE                             G W R                                   GKE +  AVKT +AA      E  T  RRDSFGDE+M++KCPG+YAT      GL  D+   G L ++    +PLPPSATR+G  AGE
Sbjct:    1 MSSYFDFDDDSSQQSGNSTCSKFATCESCVDYFGQGDVGCLWCNVPKDESRSVVGGGLCVPRFGAQDSCEFGELQATCQEGAGWYVLVLTLSALLXXXXXXTMARKFVAMWHERWWLASGGDLAVPLLDXXXEEQQHEVIFRSSLTDSAGNA-SWRCPVCGFDNRPHCKHCDLCGMSSEFAEA-YWKDKETSRPKGGATVSKPSETSVEEGKVGEGGDARPPYSTPDSG----SGAGEEDGGSGCGE--LGDAARGSDSTEVTEMSAAGQGGDREGIGKETDGGDAEESEVANEPEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVGGGVGGD-----------GYGSARRVGASLGGETKDGEKPRAAPFRTVRRLGPLTERQKR----RIWQRVIGPDGKMRWLQSLESPATLAAXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXNASSTAVAAAGDGDNGARRGR-TGARGVSXXXXXXXXNASAVLRYWTSRSRERLAEEGGAGPEEDSATEPLLQDQQEXXXXXXXXXXXXXXXXXAEEAREEGESSLSAAERGESSLWSSPQSHGDERGAKREREGSDTRSDDGSWARLSSAGSDDGGGAGRPDGSRSVGDSRIRSRSRSKDKGKE-LPAAVKTASAA-----REAVTLTRRDSFGDEIMLTKCPGFYATCTAVAHGLTTDQGFVGALYVRGVAAHPLPPSATRRGQLAGE 696

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: E6ZES8_ECTSI (Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES8_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.120e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA
Sbjct:   42 IQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 86

[Close]

BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: D0IPB5_SACJA (Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepID=D0IPB5_SACJA)

HSP 1 Score: 96.3 bits (238), Expect = 1.200e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA
Sbjct:   42 IQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: A0A0A7LKY8_SACLA (Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A7LKY8_SACLA)

HSP 1 Score: 96.3 bits (238), Expect = 1.200e-17
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA
Sbjct:   42 IQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: A0A0U1WNN6_SARFS (Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A0U1WNN6_SARFS)

HSP 1 Score: 94.0 bits (232), Expect = 9.280e-17
Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHYA ETHYAFSSVEHIMRDVKSGWLIRYMHANGA
Sbjct:   42 IQILSGAFLAMHYASETHYAFSSVEHIMRDVKSGWLIRYMHANGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: A0A8F0FCD4_9PHAE (Cytochrome b n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCD4_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 9.370e-17
Identity = 42/45 (93.33%), Postives = 45/45 (100.00%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHYAGETHYAFSSVEHIMRDV++GWLIRYMHANGA
Sbjct:   42 IQILSGAFLAMHYAGETHYAFSSVEHIMRDVENGWLIRYMHANGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: Q2TUA7_DICDH (Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID=Q2TUA7_DICDH)

HSP 1 Score: 86.3 bits (212), Expect = 2.270e-14
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSGAFLAMHY  ETHYAF+S+EHIMRDV +GWLIRY+HANGA
Sbjct:   42 IQILSGAFLAMHYVSETHYAFASIEHIMRDVDNGWLIRYLHANGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: A0A8E8PEC1_9PHAE (Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEC1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.980e-14
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            +QILSG+FLAMHY  +THYAFSS+EHIMRDVK GWLIRY+H+NGA
Sbjct:   42 IQILSGSFLAMHYVSDTHYAFSSIEHIMRDVKGGWLIRYIHSNGA 86

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: Q9MDQ4_9HYST (Cytochrome b (Fragment) n=6 Tax=Ctenomys TaxID=33551 RepID=Q9MDQ4_9HYST)

HSP 1 Score: 72.8 bits (177), Expect = 3.420e-12
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0

Query:  213 LQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            LQIL+G FLAMHY  +T  AFSSV HI RDV  GWLIRYMHANGA
Sbjct:    2 LQILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYMHANGA 46

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BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Match: X5G7R6_9GLOM (Apocytochrome b n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=X5G7R6_9GLOM)

HSP 1 Score: 74.7 bits (182), Expect = 3.750e-12
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0

Query:  203 FGGPQITKSPLQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIRYMHANGA 257
            FG    T   LQI++G  LAMHY G    AFSSVEHIMRDV SGWLIRY+H+NGA
Sbjct:   32 FGSLLGTCLALQIITGVTLAMHYIGSVDLAFSSVEHIMRDVNSGWLIRYLHSNGA 86

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig80.14709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVG3_9PHAE	2.350e-90	38.55	HECT domain-containing protein n=2 Tax=Ectocarpus ...	[more]
E6ZES8_ECTSI	1.120e-17	97.78	Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
D0IPB5_SACJA	1.200e-17	97.78	Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A0A7LKY8_SACLA	1.200e-17	97.78	Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepI...	[more]
A0A0U1WNN6_SARFS	9.280e-17	95.56	Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A...	[more]
A0A8F0FCD4_9PHAE	9.370e-17	93.33	Cytochrome b n=1 Tax=Laminaria ephemera TaxID=3093...	[more]
Q2TUA7_DICDH	2.270e-14	82.22	Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID...	[more]
A0A8E8PEC1_9PHAE	5.980e-14	80.00	Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=224924...	[more]
Q9MDQ4_9HYST	3.420e-12	75.56	Cytochrome b (Fragment) n=6 Tax=Ctenomys TaxID=335...	[more]
X5G7R6_9GLOM	3.750e-12	65.45	Apocytochrome b n=1 Tax=Rhizophagus irregularis Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 145..169 e-value: 0.0045 score: 26.2
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 147..166
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 143..172 score: 8.377
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 203..257 e-value: 5.6E-14 score: 52.4
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10		coord: 190..259 e-value: 7.0E-15 score: 56.5
None	No IPR available	PANTHER	PTHR19271:SF5	CYTOCHROME B	coord: 213..257
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 213..257
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 97..661
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..73
None	No IPR available	TMHMM	TMhelix		coord: 74..96
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 202..257
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 144..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig80	contig	P-fluviatile_contig80:33318..39581 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig80.14709.1	mRNA_P-fluviatile_contig80.14709.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig80 23452..39581 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig80.14709.1 ID=prot_P-fluviatile_contig80.14709.1|Name=mRNA_P-fluviatile_contig80.14709.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=662bp
MSSPSSYDDDSRGDNSTCSLVTTCTQCIEGAAGCLWCSVPIDSAGFGRGK
CLSRGEAQDSCEIGELQATCQEGAGWYVLLLTLSALLCCCCFLTMARKFA
AMWHERWWLSAGGELATPLLDEEGEEQQHSVIFRSSLVDATGRGGSWRCP
VCGFDNRPRCKHCDLCGISSEFAEVCVFSLSPSSGPPVRTTALRNTALSF
GVFGGPQITKSPLQILSGAFLAMHYAGETHYAFSSVEHIMRDVKSGWLIR
YMHANGAEKRRESMGERGCERVTSTLSGLFLQVCQTHDRLPDFPPCVSLV
RPAGWRVNSGVGGDASRQTESGAGAGYSAGRRVGAALGTEAAGGGKPRAA
PSRLLRPGTLTERQKRARRRRIWQRVIGPDGKLRWLQNLASPAISPAAMP
PATGAGTSTAGTGYHPPSVVPVPRSSSSAGGTGAAASAARPFGEGEERGR
ATGVGGVPAAAAAVLRYWTTSLSRGRPEGPAAAASTLDRTEPAEVQQAGA
VASPAATADAAIGVPGEGNGGGEEESLLSAVERGEGEWRRSPSQSPPPPP
SPSLGGSRGAKRERERERQGSDSSPGKEKVSTAVKTTTAAGVAAAAEVGT
RPRRDSFGDEVMMSKCPGYYATFLEGGGLALDEARDGELVIQPNPLPPSA
TRKGPAAGEDR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2
IPR005797	Cyt_b/b6_N
IPR027387	Cytb/b6-like_sf
IPR016174	Di-haem_cyt_TM
IPR036443	Znf_RanBP2_sf