mRNA_P-fluviatile_contig8.14678.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14678.1
Unique NamemRNA_P-fluviatile_contig8.14678.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: D7G2Q4_ECTSI (Fatty acid hydroxylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q4_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 5.760e-148
Identity = 224/310 (72.26%), Postives = 247/310 (79.68%), Query Frame = 3
Query:  306 MSWI----LADGMLADVMLRGAGGA-AFSLANS-DTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDD------KEEVSGSGTPQVNSGVTADSIGAAENKEKAG 1199
            MSW     L DG+LADV+++GAGG  AFSL N+ DTWQWWHYPAWLSVILLGLE VAA+VHV GR   A+TIRPRGKHLDE  PLDRLFVAFNRCSTAVFTYHA+QYLWY PWGGR+ W ++EL LASG+GA +A YVVYDLF                 XXXXXRQKAP+RGNADAVNVHP EFL GEYNHLLALHLVSR+VVPVHV++AGAFIVAGGF ASLNHTRFD+RIPF+YEVRYHDIHHWYP+CNYGQYTMLWDWVMGSLK YP +      K  + G  TP  N G  +DS  AAENKEKAG
Sbjct:    1 MSWFPTLPLLDGLLADVLVKGAGGGVAFSLVNAADTWQWWHYPAWLSVILLGLEFVAAMVHVFGRASKAATIRPRGKHLDEFTPLDRLFVAFNRCSTAVFTYHAVQYLWYAPWGGRVAWGVSELGLASGLGALVAQYVVYDLFXXXXXXXXXXXXXXXXXXXXXXRQKAPTRGNADAVNVHPLEFLGGEYNHLLALHLVSRYVVPVHVVSAGAFIVAGGFFASLNHTRFDIRIPFLYEVRYHDIHHWYPECNYGQYTMLWDWVMGSLKAYPAEEDRGERKRNLGGGVTPPAN-GARSDST-AAENKEKAG 308          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A4D9CVT2_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVT2_9STRA)

HSP 1 Score: 308 bits (788), Expect = 1.920e-97
Identity = 147/268 (54.85%), Postives = 187/268 (69.78%), Query Frame = 3
Query:  339 DVMLRGAGGAAFSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIP----FVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDDKEEVSGSG 1130
            D+ LRGAGG AF L N+ TW   H+ AW  ++L GLE++A LV   GR+    +I  RGKHLD L+  D  F+AFN+ +T +F+YH +++LW      ++ W + E+   +   A   L+VVYD  YT+FHR LH R LYKH+     RQKAPSRGN DAVNVHP EF+ GEYNHL A++LVSRF++PVH L A AFIV GGFLASLNHTRFD++ P     VY+VR+HD+HHW+P+ NYGQY MLWD+V GS KPYP+ K   SG G
Sbjct:   19 DLFLRGAGGGAFLLWNAHTWLSHHFIAWGLLVLAGLEILACLVFAFGRLRRVPSIPMRGKHLDTLDTRDLGFIAFNKLATTLFSYHLLRFLWLSKGPAQVAWRVEEMTWQNTCLALPLLFVVYDFAYTLFHRALHHRALYKHIHKHHHRQKAPSRGNTDAVNVHPVEFVAGEYNHLAAIYLVSRFLLPVHALTALAFIVLGGFLASLNHTRFDIQTPGVLSSVYQVRFHDVHHWFPESNYGQYLMLWDYVFGSFKPYPEVKGAASGGG 286          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A835Z0N4_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N4_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.080e-81
Identity = 146/308 (47.40%), Postives = 181/308 (58.77%), Query Frame = 3
Query:  327 GMLADVMLRGAGGAAFSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNA----DAVNVHPFEFLCGEYNHLLAL----------------------------------------HLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDDKEEV 1118
            G+  +++LR  G AAF L     W+ WH   W+ V+L GLE+++ L   LGR  GA  I  RGKHLD LE  D  F+AFN+  T +FTY  ++ +W  P G R+ W + +   A+ VGA LALYVV+DLFYT+FHR LH R      XXXXX              DAVNV+PFEFL GEYNHLLA+                                         LVSRFVVPVHV AA  F++AGGF+ASLNHTR+DVR+  VY+VRYHD+HHWYPDCN+GQYTMLWD   GS + +P+  E V
Sbjct:    4 GLAGELLLRLGGAAAFVLQGERQWEPWHIALWIVVLLAGLELLSVLTFALGRASGAKLIPHRGKHLDRLEATDVAFIAFNKLCTTLFTYQWLRVMWEQPLGMRMVWALGDADAANTVGATLALYVVFDLFYTLFHRALHHRSXXXXXXXXXXXXXXXXXXXXXXXXDAVNVYPFEFLSGEYNHLLAILRPIFXXXXXXXXXXXGGDDXXXXXXXXXXXXXXXXXXXXFLVSRFVVPVHVAAAAVFVIAGGFMASLNHTRYDVRVGSVYQVRYHDMHHWYPDCNFGQYTMLWDRAFGSFRHFPEGSEGV 311          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A7S1U5D6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5D6_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.000e-78
Identity = 126/246 (51.22%), Postives = 165/246 (67.07%), Query Frame = 3
Query:  360 GGAAFSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPY 1097
            G AA  L  ++TW W     +  V+L GLE+V+  V  L    GA  I  +GKH D+L   D+ F+AFN+ +  VFT+H + Y+W  P   ++ W + +    +   A   LYVVYD FYT+FHR LH++ +Y +V      QKAPSRGN DAVNVHPFEF+CGEYNH+LAL +++ F+  VHVLAAG FI+AGG LASLNHTR+DV IP +Y+V+YHD+HH  P  NYGQY MLWD +MGS + Y
Sbjct:    8 GAAAVELMEAETWSWPVRIGYTVVVLGGLELVSRFV--LTAFSGAEKIPIKGKHHDKLTTKDKCFIAFNKATVVVFTWHMLSYIWQNP---KVVWALEDATALNTAAAAALLYVVYDFFYTLFHRFLHVKAIYGYVHKHHHIQKAPSRGNVDAVNVHPFEFVCGEYNHILALFILTTFM-EVHVLAAGLFILAGGALASLNHTRYDVSIPGIYDVKYHDVHHRIPQSNYGQYIMLWDHLMGSFREY 247          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A7S4IH56_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IH56_9EUKA)

HSP 1 Score: 250 bits (638), Expect = 1.350e-75
Identity = 116/247 (46.96%), Postives = 165/247 (66.80%), Query Frame = 3
Query:  360 GGAAFSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYP 1100
            G  AF +  S  W+W+   AW+  I+  LE+++ +V +       S I  +GK LDEL  +D  ++ FNR  T VFT+  IQ+ WY     ++ W +  L + + +GA +A+++VYD FY ++HR LHIRG+YK++     RQ  P+RGN DA+NVHP EF+ GEYNHLL ++LVSR V+ +HVL+   F++ G  LASLNHTRFD+++  +++V+YHDIHHWYP  N+GQYTMLWD V G  K YP
Sbjct:   11 GAVAFIMFESQYWEWYQICAWVVGIIAALEILSRVVMIAQPFF--SVIPAKGKPLDELATIDLCYIWFNRLCTPVFTFQVIQFCWYSS---QVVWALDSLGILNTLGAMVAMFIVYDFFYAIYHRSLHIRGIYKYIHKHHHRQTVPTRGNVDAINVHPVEFVMGEYNHLLVMYLVSR-VIEIHVLSVLLFLLIGATLASLNHTRFDIQVSKLFQVKYHDIHHWYPYANFGQYTMLWDHVFGWFKDYP 251          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A7S0W795_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W795_9CRYP)

HSP 1 Score: 244 bits (623), Expect = 3.420e-73
Identity = 126/248 (50.81%), Postives = 166/248 (66.94%), Query Frame = 3
Query:  366 AAFSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDDK 1109
            AAF   ++ TW    Y +W +VI+LGLE+VA LV  + ++     +  RG HLD L   D  F+ +N+  TAVFTYHA+++ WY      + W + EL L + V A   L+VVYD FY +FHR LH+R +YK+ XXXXX Q APSRG ADAVNVHPFEF+CGEY HLLA+     F+VP H++ A  F+V GG +ASLNHTRF+V +  V++V++HD HH  P  NYGQY MLWD+V G+   YP +K
Sbjct:   27 AAFKFWDASTWTPLQYLSWCTVIVLGLEIVAWLVSNIPKLFNTVILPKRGSHLDVLTSKDIAFICWNKFCTAVFTYHALRFCWYSK---TVKWGLDELTLLNTVVALGGLFVVYDFFYHIFHRALHLRSVYKYXXXXXXNQHAPSRGTADAVNVHPFEFVCGEYCHLLAI-----FLVPCHIMTAALFVVGGGVVASLNHTRFNVSLLNVFDVKFHDQHHVVPTVNYGQYIMLWDYVFGTYHEYPHEK 266          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A061SG51_9CHLO (C-5 sterol desaturase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SG51_9CHLO)

HSP 1 Score: 244 bits (624), Expect = 4.450e-73
Identity = 124/246 (50.41%), Postives = 162/246 (65.85%), Query Frame = 3
Query:  399 QWWHYPAWLSVILLGLEVVAALVHVLGRVC-------GASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVR---IPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDD 1106
            +WW Y  +   ++L +E+++A V  +G V            I  RG+HLD LE  D +F+AFNR +T VFT+HA+Q+LW  P   R+ W   +   AS + A  A++VVYD  Y +FHR LH R +YKHV     RQ APSRGN DAVNVHPFEFL GEYNHL A+  VSR  VPVH  AA  FIV+GG LASLNHTR D+    +P++++V+YHD+HHW P  N+GQYTM+WD+V  S + YP +
Sbjct:   32 EWWMYALFGLAVVLAMELLSASVPRIGSVILTLQGRRNTGLIPARGRHLDALEATDYVFIAFNRLTTPVFTFHAMQFLWQSP---RVVWGARDATAASVLLALAAMFVVYDSTYCLFHRALHHRSVYKHVHKHHHRQMAPSRGNVDAVNVHPFEFLPGEYNHLFAIWAVSR-AVPVHAGAALLFIVSGGVLASLNHTRLDIASPVLPWLFKVKYHDVHHWDPSVNFGQYTMIWDYVFRSFRAYPGE 273          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A7S0GVS8_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GVS8_9EUKA)

HSP 1 Score: 241 bits (616), Expect = 3.480e-72
Identity = 116/248 (46.77%), Postives = 166/248 (66.94%), Query Frame = 3
Query:  372 FSLANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDDKEE 1115
            F +    TWQ WH+  +  VI LG+E+++ +V ++ +    + I  RGKHLD  E +D +++  N+ +TAVF YH ++Y+        + W+I  L + +   + + +++VYD FYT+FHRVLH R LY+ V     RQ+AP+RGN DA+NVHPFEF+ GEY HLLA HLV++++V VH++A   F+V GG LASLNHTRFD     +Y V+ HD+HH  P+ NYGQY MLWD +MGS KPY + K+E
Sbjct:   25 FVIHQPGTWQVWHFGVFSVVIYLGMEILSHIVPLVFQN-KTNLIPMRGKHLDVFETVDHVYININKIATAVFVYHMLKYVN----AANVEWDIGGLSVVNFPVSVVLMHIVYDFFYTIFHRVLHNRQLYRFVHKHHHRQRAPTRGNLDAINVHPFEFVVGEYLHLLAAHLVTKYLVKVHIVAIAWFVVVGGILASLNHTRFDFSFLGIYSVKVHDVHHRLPESNYGQYIMLWDKIMGSYKPYVEPKKE 267          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: L1JK92_GUITC (Fatty acid hydroxylase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JK92_GUITC)

HSP 1 Score: 236 bits (603), Expect = 9.750e-71
Identity = 116/231 (50.22%), Postives = 155/231 (67.10%), Query Frame = 3
Query:  411 YPAWLSVILLGLEVVAALVHVLG-RVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYP 1100
            Y  W  VILLGLE+++ LV+ +  R    S I  RGKHLD L   D  F+ +N+ +T +FTYHA+++ W  P   RI W  +E+ + + V AF +L+VVYD FY ++HR+LH+RGLYK +      Q APSRGNADAVNVHP EF+ GEY HLLA+     F++P H + A  F+V GG LASLNHTR+D+ +P +++ + HD HH  P  NYGQYTMLWD V G+  P+P
Sbjct:    4 YALWSVVILLGLELMSYLVNEIPQRFFNPSAIPIRGKHLDVLSWKDISFITWNKFTTTLFTYHALRFCWLSP---RIAWGWSEMTILNTVIAFFSLFVVYDFFYCIWHRILHVRGLYKFIHKHHHHQAAPSRGNADAVNVHPIEFIVGEYCHLLAI-----FIIPCHAVVAAVFVVLGGILASLNHTRYDIAVPLLFDTKAHDQHHVIPTVNYGQYTMLWDRVFGTYVPHP 226          
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Match: A0A7S2TQE1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TQE1_9EUKA)

HSP 1 Score: 234 bits (597), Expect = 2.710e-69
Identity = 118/244 (48.36%), Postives = 159/244 (65.16%), Query Frame = 3
Query:  378 LANSDTWQWWHYPAWLSVILLGLEVVAALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQYLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGLYKHVXXXXXRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPVHVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQYTMLWDWVMGSLKPYPDDK 1109
            L ++ TW+WWH+  +  VI LGLE++  LV  +     A+ I  RGKHLDE E +D  F+ FN+ +  VFTYH I++ +       I W+I +L + +G  + +A+++VYD FYT+FHR L  R      X    RQ+AP+RGN DA+NVHPFEF+ GEY HL+A  LVSR V+ +HV A   F+  GG LASLNHTR+D+    VY V+ HD+HH  P+ NYGQY MLWD +MGS KPY  +K
Sbjct:   30 LHDASTWEWWHFAGFALVIYLGLELLNVLV--INAFSSANQIPIRGKHLDEFEFIDNAFIQFNKLAIIVFTYHMIRFTFTAK---NICWDIRDLGILNGPSSLVAMHIVYDFFYTLFHRFLXNRXXXXXXXKHHHRQRAPTRGNLDAINVHPFEFVVGEYIHLVAAFLVSR-VMTIHVGAIAWFVAVGGLLASLNHTRYDLSFLGVYSVKVHDVHHRLPESNYGQYIMLWDKLMGSYKPYTTEK 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q4_ECTSI5.760e-14872.26Fatty acid hydroxylase domain-containing protein n... [more]
A0A4D9CVT2_9STRA1.920e-9754.85Fatty acid hydroxylase domain-containing protein n... [more]
A0A835Z0N4_9STRA1.080e-8147.40Fatty acid hydroxylase domain-containing protein n... [more]
A0A7S1U5D6_9STRA3.000e-7851.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4IH56_9EUKA1.350e-7546.96Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S0W795_9CRYP3.420e-7350.81Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A061SG51_9CHLO4.450e-7350.41C-5 sterol desaturase n=2 Tax=Tetraselmis sp. GSL0... [more]
A0A7S0GVS8_9EUKA3.480e-7246.77Hypothetical protein n=2 Tax=Amorphochlora amoebif... [more]
L1JK92_GUITC9.750e-7150.22Fatty acid hydroxylase domain-containing protein n... [more]
A0A7S2TQE1_9EUKA2.710e-6948.36Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3751259..3753353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.9
Seed ortholog evalue9.6e-121
Seed eggNOG ortholog2880.D7G2Q4
KEGG rclassRC00904
KEGG koko:K00227
KEGG ReactionR07215,R07486,R07491,R07505
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00101,M00102
EggNOG free text desc.C-5 sterol desaturase activity
EggNOG OGsCOG3000@1,KOG0872@2759
EC1.14.19.20
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionFatty acid hydroxylase
Ec32 orthologEc-11_003100.1
Exons2
Model size1763
Cds size897
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14678.1prot_P-fluviatile_contig8.14678.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3751564..3752792 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817264.5477788-UTR-P-fluviatile_contig8:3751258..37515631622817264.5477788-UTR-P-fluviatile_contig8:3751258..3751563Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3751259..3751563 +
1693571822.8158517-UTR-P-fluviatile_contig8:3751258..37515631693571822.8158517-UTR-P-fluviatile_contig8:3751258..3751563Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3751259..3751563 +
1622817264.5831857-UTR-P-fluviatile_contig8:3752792..37533531622817264.5831857-UTR-P-fluviatile_contig8:3752792..3753353Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3752793..3753353 +
1693571823.271539-UTR-P-fluviatile_contig8:3752792..37533531693571823.271539-UTR-P-fluviatile_contig8:3752792..3753353Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3752793..3753353 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817264.5594099-CDS-P-fluviatile_contig8:3751563..37522591622817264.5594099-CDS-P-fluviatile_contig8:3751563..3752259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3751564..3752259 +
1693571822.8274362-CDS-P-fluviatile_contig8:3751563..37522591693571822.8274362-CDS-P-fluviatile_contig8:3751563..3752259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3751564..3752259 +
1622817264.5721362-CDS-P-fluviatile_contig8:3752591..37527921622817264.5721362-CDS-P-fluviatile_contig8:3752591..3752792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3752592..3752792 +
1693571822.8369124-CDS-P-fluviatile_contig8:3752591..37527921693571822.8369124-CDS-P-fluviatile_contig8:3752591..3752792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3752592..3752792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14678.1

>prot_P-fluviatile_contig8.14678.1 ID=prot_P-fluviatile_contig8.14678.1|Name=mRNA_P-fluviatile_contig8.14678.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=299bp
MSWILADGMLADVMLRGAGGAAFSLANSDTWQWWHYPAWLSVILLGLEVV
AALVHVLGRVCGASTIRPRGKHLDELEPLDRLFVAFNRCSTAVFTYHAIQ
YLWYGPWGGRIGWEITELRLASGVGAFLALYVVYDLFYTVFHRVLHIRGL
YKHVHKHHHRQKAPSRGNADAVNVHPFEFLCGEYNHLLALHLVSRFVVPV
HVLAAGAFIVAGGFLASLNHTRFDVRIPFVYEVRYHDIHHWYPDCNYGQY
TMLWDWVMGSLKPYPDDKEEVSGSGTPQVNSGVTADSIGAAENKEKAG*
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mRNA from alignment at P-fluviatile_contig8:3751259..3753353+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14678.1 ID=mRNA_P-fluviatile_contig8.14678.1|Name=mRNA_P-fluviatile_contig8.14678.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2095bp|location=Sequence derived from alignment at P-fluviatile_contig8:3751259..3753353+ (Porterinema fluviatile SAG_2381)
ATTACAGCACTGACAGAGGTAACACTACCCGGCGTGCTCTCAGCCGGAAG AGAGTGCCTGCGGGCAGAAAAGTCGGACAGAAACCAATCTTGATCAGATC GAAGAAGGGACAGGAAAGGCTGCGAAAGAAAGCAGCCCAGCTGCTCGTGC TGGTTGAGGCACGCACAAAGCTGTCGCGGAGTTCTGCGTGCGCAGCGTAC TAAGCTTCAGCGGGACACAGTGCTGAGACTCGAAGCAGGGACTGTCTTCT CAAGGTCAAGCGCCAAGCACAGACATTGCAGTCAGAGATCGAGCCCCGAG AAAGTATGTCTTGGATCTTAGCAGATGGGATGCTGGCGGATGTTATGCTC AGGGGAGCCGGCGGCGCGGCGTTCTCTCTCGCCAACTCCGACACCTGGCA ATGGTGGCACTACCCGGCGTGGCTGTCGGTCATCCTCCTGGGCCTGGAGG TTGTCGCAGCACTGGTTCACGTACTCGGTCGCGTGTGCGGAGCATCCACC ATCCGGCCCCGCGGAAAACATCTTGACGAGCTTGAGCCGTTAGACAGGCT TTTCGTCGCGTTCAACCGCTGCAGCACGGCGGTCTTCACGTACCACGCCA TCCAGTACCTATGGTACGGCCCCTGGGGGGGCAGGATCGGGTGGGAGATC ACGGAGCTGAGGCTCGCGAGCGGGGTTGGTGCCTTCTTGGCGCTTTACGT GGTGTACGACCTGTTCTACACCGTGTTCCACAGGGTGTTGCACATCCGAG GCCTGTATAAGCACGTGCACAAGCACCACCACCGGCAGAAGGCACCCTCG CGGGGCAATGCCGACGCCGTCAACGTGCACCCGTTCGAGTTCCTCTGCGG GGAGTACAATCATCTCCTGGCGCTGCATCTGGTGTCGAGGTTCGTGGTGC CGGTGCACGTACTAGCGGCCGGTGCCTTCATCGTAGCGGGAGGGTTCCTG GCGTCGCTGAACCATACCCGCTTCGACGTCCGAATCCCGTTTGTCTACGA GGTGAGTTTCGCGTGCGATGTGTTGCACTCCCTGGCAAAATGACTCGTGA CATAGTCTCATCAGATGATCGCATATTACCTCAGGCCGTCAGAGCGAGCG AGATCGGTGCTGCTCTCTCTCTGAAGGAGCACACGGTGAATGATGAAGTT GCCGAAAACTTAGCGACGGTTTATTGAGTCCGCCCTCTCCCCGACCCCAC GGGATGGTAAGGGAAGCTTCCACTACCGTCGTGTTCGCAATGTAGGCGAC CGCTCCCTCCCCCTCCCCTTCCCTCGCTCCTTTTACCTAAGCCTTGCTTC GACTCCCCTCCCCCCCAACCGCTCGCGAGGCAGGTGCGATACCACGACAT CCACCACTGGTATCCTGACTGCAACTACGGGCAGTACACCATGTTGTGGG ACTGGGTGATGGGAAGTTTGAAGCCGTATCCTGACGACAAGGAGGAGGTC AGCGGCAGCGGGACGCCTCAAGTGAACAGTGGTGTCACAGCGGACAGCAT AGGAGCGGCGGAGAATAAGGAGAAGGCGGGCTGACCAATCATGAGTGATT GCGGGGGAGTTGGTGTCGGAGGCGGCGAAAAGATGTATTTTTACTGCTGT ACCCTTCGGACAGCCGTCGAAGCCGCTGCGATGCGGTGCGAACTCATTGT TGGTTGTGATGTTTGTCTTGCGTCGTCGTGCTTTTCACGCTTGGGATAAC TGCACGGGTGCTGCGCTTCTTTTCAAGTGCTGGCAATCTGCAGATGAACA CTTTTATCGTATGGCGCACACGTATATTCTTGCGAAGTCAGTACGATTTT CTAGCTGTATATTTTTATGTTTGATCCTGTCGACGTTGGCTTCCCCAGTA ACGGACGGTAACGGACGGCGGGAACAGAGGGTGTCCATTGCTGAGTTGCG ACATGCCGAGAGGAATCTTAGTTTGCTTATTTGGGATGTGTTTGCTGCAG CGCTTCCTTCGGGGGTATGCAGTCGTGATGGATTGGCCAATTCTGCAAGT GGTATTCTGTTTTCCTGAACGAAGTGTGCCAACACACGCACATGGACTTC ATCGGCCGGAGCATAAGACCTGTCAAACATCGATTATAAGCCGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3751259..3753353+

>mRNA_P-fluviatile_contig8.14678.1 ID=mRNA_P-fluviatile_contig8.14678.1|Name=mRNA_P-fluviatile_contig8.14678.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1794bp|location=Sequence derived from alignment at P-fluviatile_contig8:3751259..3753353+ (Porterinema fluviatile SAG_2381)
ATGTCTTGGATCTTAGCAGATGGGATGCTGGCGGATGTTATGCTCAGGGG
AGCCGGCGGCGCGGCGTTCTCTCTCGCCAACTCCGACACCTGGCAATGGT
GGCACTACCCGGCGTGGCTGTCGGTCATCCTCCTGGGCCTGGAGGTTGTC
GCAGCACTGGTTCACGTACTCGGTCGCGTGTGCGGAGCATCCACCATCCG
GCCCCGCGGAAAACATCTTGACGAGCTTGAGCCGTTAGACAGGCTTTTCG
TCGCGTTCAACCGCTGCAGCACGGCGGTCTTCACGTACCACGCCATCCAG
TACCTATGGTACGGCCCCTGGGGGGGCAGGATCGGGTGGGAGATCACGGA
GCTGAGGCTCGCGAGCGGGGTTGGTGCCTTCTTGGCGCTTTACGTGGTGT
ACGACCTGTTCTACACCGTGTTCCACAGGGTGTTGCACATCCGAGGCCTG
TATAAGCACGTGCACAAGCACCACCACCGGCAGAAGGCACCCTCGCGGGG
CAATGCCGACGCCGTCAACGTGCACCCGTTCGAGTTCCTCTGCGGGGAGT
ACAATCATCTCCTGGCGCTGCATCTGGTGTCGAGGTTCGTGGTGCCGGTG
CACGTACTAGCGGCCGGTGCCTTCATCGTAGCGGGAGGGTTCCTGGCGTC
GCTGAACCATACCCGCTTCGACGTCCGAATCCCGTTTGTCTACGAGATGT
CTTGGATCTTAGCAGATGGGATGCTGGCGGATGTTATGCTCAGGGGAGCC
GGCGGCGCGGCGTTCTCTCTCGCCAACTCCGACACCTGGCAATGGTGGCA
CTACCCGGCGTGGCTGTCGGTCATCCTCCTGGGCCTGGAGGTTGTCGCAG
CACTGGTTCACGTACTCGGTCGCGTGTGCGGAGCATCCACCATCCGGCCC
CGCGGAAAACATCTTGACGAGCTTGAGCCGTTAGACAGGCTTTTCGTCGC
GTTCAACCGCTGCAGCACGGCGGTCTTCACGTACCACGCCATCCAGTACC
TATGGTACGGCCCCTGGGGGGGCAGGATCGGGTGGGAGATCACGGAGCTG
AGGCTCGCGAGCGGGGTTGGTGCCTTCTTGGCGCTTTACGTGGTGTACGA
CCTGTTCTACACCGTGTTCCACAGGGTGTTGCACATCCGAGGCCTGTATA
AGCACGTGCACAAGCACCACCACCGGCAGAAGGCACCCTCGCGGGGCAAT
GCCGACGCCGTCAACGTGCACCCGTTCGAGTTCCTCTGCGGGGAGTACAA
TCATCTCCTGGCGCTGCATCTGGTGTCGAGGTTCGTGGTGCCGGTGCACG
TACTAGCGGCCGGTGCCTTCATCGTAGCGGGAGGGTTCCTGGCGTCGCTG
AACCATACCCGCTTCGACGTCCGAATCCCGTTTGTCTACGAGGTGCGATA
CCACGACATCCACCACTGGTATCCTGACTGCAACTACGGGCAGTACACCA
TGTTGTGGGACTGGGTGATGGGAAGTTTGAAGCCGTATCCTGACGACAAG
GAGGAGGTCAGCGGCAGCGGGACGCCTCAAGTGAACAGTGGTGTCACAGC
GGACAGCATAGGAGCGGCGGAGAATAAGGAGAAGGCGGGCTGAGTGCGAT
ACCACGACATCCACCACTGGTATCCTGACTGCAACTACGGGCAGTACACC
ATGTTGTGGGACTGGGTGATGGGAAGTTTGAAGCCGTATCCTGACGACAA
GGAGGAGGTCAGCGGCAGCGGGACGCCTCAAGTGAACAGTGGTGTCACAG
CGGACAGCATAGGAGCGGCGGAGAATAAGGAGAAGGCGGGCTGA
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