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Homology
BLAST of mRNA_P-fluviatile_contig8.14670.1 vs. uniprot
Match: D8LKZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ8_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.760e-82 Identity = 206/342 (60.23%), Postives = 235/342 (68.71%), Query Frame = 1
Query: 2434 MEFERAAV-SVHYKGRSSEIMLNLAGNVADREVDASSLALDLQAALNLASPPVGLRLRVAPGAEAVVCPLSVLIACPTYIATTFQGMSWFPLL--GGEDDEGVAAGSSPTSLSTKPPEAPTGDPFLPPPLGSPLEHDLSFLATGSA--ASPAEGCGRPLTAPPGDRSRGGSKPRPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFGRPVTTGNANSGSASPAWGLGSPHGFRCEETVPRDVT-IGARRPSTAPAFAAQGLWRQSSSNLRGSRCEWGVYGERFGRGGDLQEEEFGNGTSEAAGAPHLP-PDNGTAGGGGGISCASGSWT---AEPPSECW 3429
M F R AV SV Y + +I LNLA N A E D ++LAL+LQAALNL++PPVGLRLRVAPGA+AV+CPLS +IACP+YIAT +QGMSWFPLL GG+D + + P + T+ P P+ DP LPPPLGSPL+H+LSFLATG ASP+EGCGRPLTAPPGDR+RG ++P PGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXX +S S SPAWG SPHGFRCEET GARRP+TAPA L RQ SSNL GSR E GV+GERFGRGG ++ E T A A H P PD G GG G W A P ECW
Sbjct: 1 MSFNRGAVVSVQYGDCAWDIKLNLAANTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQGMSWFPLLEGGGDDHQEAPPNAPPAAPQTQLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMTRPHPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWG--SPHGFRCEETTTTTAEDAGARRPATAPA-----LRRQPSSNLSGSRNENGVFGERFGRGGSVEVNEE---TGGVAAAHHRPMPDGGGLGGDGRAVGGDVDWGWCGAGPTRECW 332
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-11_006150.1 |
| Exons | 2 |
| Model size | 4000 |
| Cds size | 1452 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817263.6687818-UTR-P-fluviatile_contig8:3686063..3688046 | 1622817263.6687818-UTR-P-fluviatile_contig8:3686063..3688046 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 3686064..3688046 + |
| 1693571816.4120145-UTR-P-fluviatile_contig8:3686063..3688046 | 1693571816.4120145-UTR-P-fluviatile_contig8:3686063..3688046 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 3686064..3688046 + |
| 1622817263.7032886-UTR-P-fluviatile_contig8:3689718..3690283 | 1622817263.7032886-UTR-P-fluviatile_contig8:3689718..3690283 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 3689719..3690283 + |
| 1693571816.4375632-UTR-P-fluviatile_contig8:3689718..3690283 | 1693571816.4375632-UTR-P-fluviatile_contig8:3689718..3690283 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 3689719..3690283 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817263.6809578-CDS-P-fluviatile_contig8:3688046..3688749 | 1622817263.6809578-CDS-P-fluviatile_contig8:3688046..3688749 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 3688047..3688749 + |
| 1693571816.4205139-CDS-P-fluviatile_contig8:3688046..3688749 | 1693571816.4205139-CDS-P-fluviatile_contig8:3688046..3688749 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 3688047..3688749 + |
| 1622817263.6915488-CDS-P-fluviatile_contig8:3688969..3689718 | 1622817263.6915488-CDS-P-fluviatile_contig8:3688969..3689718 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 3688970..3689718 + |
| 1693571816.4289262-CDS-P-fluviatile_contig8:3688969..3689718 | 1693571816.4289262-CDS-P-fluviatile_contig8:3688969..3689718 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 3688970..3689718 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14670.1 >prot_P-fluviatile_contig8.14670.1 ID=prot_P-fluviatile_contig8.14670.1|Name=mRNA_P-fluviatile_contig8.14670.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=484bp
MPPAGTAPGNIGTSFYGVRPCAPLLLEHPLSQTSPAKAETDRCKRVQMRL PPDTLDRPFAISLLTGRCLDGPANAKRLLLYLSTNCADPCKNYRPERSAA FIQYTHEEKRGRTDSRHLLSVVLGYYFHFDTCENSVPFPTGQSTIPGSSS MEFERAAVSVHYKGRSSEIMLNLAGNVADREVDASSLALDLQAALNLASP PVGLRLRVAPGAEAVVCPLSVLIACPTYIATTFQGMSWFPLLGGEDDEGV AAGSSPTSLSTKPPEAPTGDPFLPPPLGSPLEHDLSFLATGSAASPAEGC GRPLTAPPGDRSRGGSKPRPGRREGLGRPTSATPSDKSFGVRRLRPAKSE GYFGRPVTTGNANSGSASPAWGLGSPHGFRCEETVPRDVTIGARRPSTAP AFAAQGLWRQSSSNLRGSRCEWGVYGERFGRGGDLQEEEFGNGTSEAAGA PHLPPDNGTAGGGGGISCASGSWTAEPPSECWV* back to topmRNA from alignment at P-fluviatile_contig8:3686064..3690283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig8.14670.1 ID=mRNA_P-fluviatile_contig8.14670.1|Name=mRNA_P-fluviatile_contig8.14670.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4220bp|location=Sequence derived from alignment at P-fluviatile_contig8:3686064..3690283+ (Porterinema fluviatile SAG_2381) ATTCCAGACTCCTGGAGCTGACGCGGGTGCGCAGGTGAGGTCGAAATATG
ATGGCTTAGAGGGTGCGCAGTGATGCGTGGTGGGTGTTCCCCAGCGAATT
TCTGGATGATTCGTCTCTGGGTGTTTGCTTCAACACAGGCACAAAGTCGC
CCGCAAGTTTTTTTTCCTGCTGCAGAAGATTCGGAACGAGTGTAGGAGGA
GCGTCGCGTTGATGGTCCCAAGATCGGCACACCTTAGATCCACCACTGGT
AGCCGAACAGCATAACCCTGGTCGGACGAGGCTGCGCGTGGTACCTTTAC
TGAGTTTGTCCATCGTTCGCACACAATCCTTGAGGGAAAGGTCGCGGCTC
AAATTTTGGTCGCGCCGCGTTCCCCGCGCTTTTTCTTTCTCGCAATCCTC
TCCTGTGGGCCGTGCGTTATCGCGTTGGTCTCCCGTGAATTTCAACCACA
AGACCGGTGCATCCGGGCATTCAAAGCACCAATAGTGGCATGTATGTAAG
GGAGTATCAGTGTTGACTAATCGTTTGTAAGTTCAAAAAGTGAAAATAGT
GTCATTCGGCCTTTCATTTTTTTTCGATCTTGTAGCTTAGATCCATCGAT
CTAAGGGAACGCCAACACCGTTTGCCCCTCAGGACCGCAAACCCAAACCA
ACCTCGCAAAGGGGGCACTAGGTCGCCCCGACTCGGTCTGACCCAGCGCA
GCCTACGTCTCGGCCCAAGTGCACAAAACTTACGACAACCACCCACCCCA
GCCCAAAAATCAATTACACTTTTAAGCATTTGTGGAAGAAAGGTGGGCAG
GATGACGTACGCAGGTGGGAAGATACGATCTTTTCGGTGGATATATTTTC
GATGCGCGTATCTTGCTGATCCGTTGATTTATCAAATACCCCGCGTACCA
GGTCATCTCTCACGAGTTTGCCTTGAAAGTCGGGAAGTCCTACATTTACG
GGCACTCGTCTGTACTCCACCTCTCGCAAATTCCGACCGACCCTGAATGC
ACACACTCACGCCGTCGTCAGATTTTCATCATCATCCGCTTGTTGTTTAT
TTGTTGTTGTTTCCTTCACACAAAAGTCATTCTGTAGAAGACATCCGTGG
TCACACGACCAACGTACCCATAAAGCGGTGCACACCTCGGCACAAATGAA
ACCAAAAGACAAAGACTCCAAAAAAAGTTGACACAATGCGATGTATCTAA
TATGCTTTGGAGCCCGCCGCTCCCCCTGGCATGCGGTAACAGGTGAAAAA
TAAAAGTTGGTGGAAAGACAAAGACAAAAACAAAGCTTGGGGGAAGTCAT
TTCAGCCACCGCTTGTACCACTACTTTGCCGAGATATTTGACTATTCCCA
TGCCAGATTTCCTCTGGCCAGGCCATTGCCATGCGTAAACAAATTGTTGA
TCCAGCCTTGTGTTTGCCGGTGGGTTCGTATGGCATCTTTCGTTTTCGTT
CTCTCCACAAATATGTTGTGTGCTGTTGCGGCAGGGAACGACAGCACAAT
ACCAGCGCACCGTTGTTGTGTGCTGCATTATTCGCACATCGTCTCCATAC
TGTAATTCAAAAGCACGGGATGTGCCAGAGCATCGTTATTGTATGCTGCA
TTTTTTGCACTCCGTCACGATACTAAAATGCAAAATCAGGGGATGCGCGA
GGTAACATCGCCATCGTGCGCTTCGACCCAGCTCAGACAAGATCACGCAC
AGAAAGAGGGTTTGGATGAGAATACTTGTGCGGTCGCGCTCTCGCCTTAG
GAAGAAGTGGTGTGCTTGCGAGAGGGATCCAGAATATGTAACCGGAGGTA
CGCACGCAAACATACCAACGGCGGCTGAATTCTGATATCTGTGGTAGAAC
CATTGCCCTTCACGCCATCGTACCTGTTCATGACACAGAGCGATTTGCAC
GAAGTATCTGTGGGTGTAAAGCGGACTGTAGAAAAACAGGGTTGGGCGCG
CCGCGGCGAATTCTCGAACCGTCCACCACTTTTATGCCCCCCGCTGGCAC
AGCACCCGGAAATATAGGCACTTCCTTTTATGGTGTGCGCCCTTGTGCCC
CTTTACTTTTGGAGCACCCCCTCTCGCAAACCTCACCGGCGAAAGCGGAA
ACAGATCGTTGCAAGAGGGTGCAGATGCGGCTCCCGCCCGACACGCTTGA
CCGACCCTTTGCAATCTCGTTGCTCACAGGCCGCTGCTTGGATGGCCCAG
CCAACGCAAAGCGCTTGTTACTGTATCTTTCGACGAACTGTGCCGATCCT
TGCAAGAACTATCGACCGGAGCGATCCGCGGCGTTTATTCAATATACCCA
CGAAGAAAAGCGCGGACGGACGGACTCGAGGCATCTCTTGTCGGTGGTTC
TGGGTTACTATTTCCATTTCGACACATGCGAAAATAGCGTCCCGTTTCCT
ACAGGTCAGTCGACCATCCCTGGCTCCAGCAGCATGGAATTCGAGAGGGC
TGCTGTTTCCGTCCATTACAAGGGTCGGTCGTCGGAAATCATGCTCAACT
TGGCTGGAAATGTCGCCGATCGCGAGGTGGATGCCTCGTCCTTGGCTCTC
GACCTGCAGGCCGCTCTCAACCTCGCTTCGCCTCCGGTAGGCCTGCGCCT
TCGCGTTGCTCCGGGCGCGGAGGCCGTAGTGTGTCCACTGAGCGTACTCA
TCGCCTGCCCGACGTACATCGCAACCACCTTCCAAGGCGAGTGTTTGTGC
CGCTCCGACTTTCTTGCGCAAGACGTAAGAATGATAGACCAAAAAGAAAT
TGCTCCGAGACGTGTTCATGGTAGGTGGAAGTTTTTATACTTCGTCCTTG
TTTTTCTTACTTGTCTAAAAAATGTGGTTCTTGTTGCACAAAGACTGCTG
CACGACCCAAGTGTAGCCTCACTTACCCTTCGTGAACTCACCAACACGAC
CAACAGGAATGTCATGGTTCCCTTTACTGGGGGGGGAGGACGACGAAGGC
GTAGCAGCCGGCAGTTCGCCGACATCACTGTCAACAAAGCCCCCTGAAGC
CCCGACCGGAGACCCCTTCCTACCCCCGCCCCTGGGATCGCCGCTAGAAC
ACGACCTGTCCTTCTTGGCGACCGGGTCCGCCGCGTCTCCCGCCGAGGGG
TGTGGCCGTCCACTCACGGCACCCCCTGGCGACCGGTCACGAGGCGGATC
GAAGCCGCGGCCTGGTCGGAGGGAAGGCCTCGGCAGGCCCACCTCCGCCA
CACCAAGTGACAAGAGCTTCGGCGTGCGGCGACTCCGTCCGGCGAAGAGC
GAGGGATACTTCGGGCGCCCCGTCACCACGGGCAATGCCAACAGCGGCAG
CGCAAGCCCGGCATGGGGTCTGGGGAGCCCCCACGGGTTTCGGTGCGAGG
AAACCGTCCCGCGCGACGTCACCATCGGCGCCCGCCGGCCGTCAACGGCT
CCCGCGTTTGCTGCTCAAGGGTTGTGGCGGCAGTCGTCGTCGAACCTCCG
CGGCTCCCGGTGTGAGTGGGGAGTGTACGGGGAGCGCTTCGGCCGAGGAG
GGGACTTGCAAGAGGAAGAATTTGGTAACGGGACAAGCGAGGCCGCTGGG
GCGCCACACCTGCCGCCGGATAATGGCACTGCGGGCGGTGGCGGCGGCAT
CTCTTGCGCCAGCGGCTCTTGGACAGCAGAGCCGCCCAGTGAGTGTTGGG
TGTGATTGGTTGTCAAGCAAAGTGACAGCCTGCGGCAAGCAGTAAAAGAA
CAGAAGTGCTGTGAAGTAGAAGACCCATGTTTCGTTTTTGTTTGTCGTCG
TGCATATGCCCGGGTGCTGTTGGGGATCCCGATGTCCATGTGCAGTTCCA
AGAGTTCTTTATGCCTGTGGCTGCCTCCTCTGATGTGCGTTTGAAGTATT
GATACGCGCGTGAAAAGCCGAGAAATGGACGCCATGGTAGGACCGGCGGG
CGAGTAAAAGTTCCAGGTAGTTATTGCGTACATACCGTGTGCCGAGCGAT
TTCAAGTTAGACAGAAGACTGACGTTGATACCCTTCACAACAACCATTAG
CGACAGCGGTTCTCATGTCACGGTTCCACCTACACAGCGACAGTAGCAAG
GTGTCAATTCTGCGAGGCCGAGGACGATGAATCGGGAAGGCTACCATGAC
CGGGTTCGGGTGCACCACGCCCTAGCCGAGGTTTCCCTTTCTGGCGAGGC
GCGCCCGTCGTGAATATTGACGAGATATATCCATCTGCTTACGGCTTGCA
ATCAAAGCTTCTGTCGTCCC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig8:3686064..3690283+ >mRNA_P-fluviatile_contig8.14670.1 ID=mRNA_P-fluviatile_contig8.14670.1|Name=mRNA_P-fluviatile_contig8.14670.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2904bp|location=Sequence derived from alignment at P-fluviatile_contig8:3686064..3690283+ (Porterinema fluviatile SAG_2381) ATGCCCCCCGCTGGCACAGCACCCGGAAATATAGGCACTTCCTTTTATGG TGTGCGCCCTTGTGCCCCTTTACTTTTGGAGCACCCCCTCTCGCAAACCT CACCGGCGAAAGCGGAAACAGATCGTTGCAAGAGGGTGCAGATGCGGCTC CCGCCCGACACGCTTGACCGACCCTTTGCAATCTCGTTGCTCACAGGCCG CTGCTTGGATGGCCCAGCCAACGCAAAGCGCTTGTTACTGTATCTTTCGA CGAACTGTGCCGATCCTTGCAAGAACTATCGACCGGAGCGATCCGCGGCG TTTATTCAATATACCCACGAAGAAAAGCGCGGACGGACGGACTCGAGGCA TCTCTTGTCGGTGGTTCTGGGTTACTATTTCCATTTCGACACATGCGAAA ATAGCGTCCCGTTTCCTACAGGTCAGTCGACCATCCCTGGCTCCAGCAGC ATGGAATTCGAGAGGGCTGCTGTTTCCGTCCATTACAAGGGTCGGTCGTC GGAAATCATGCTCAACTTGGCTGGAAATGTCGCCGATCGCGAGGTGGATG CCTCGTCCTTGGCTCTCGACCTGCAGGCCGCTCTCAACCTCGCTTCGCCT CCGGTAGGCCTGCGCCTTCGCGTTGCTCCGGGCGCGGAGGCCGTAGTGTG TCCACTGAGCGTACTCATCGCCTGCCCGACGTACATCGCAACCACCTTCC AAGATGCCCCCCGCTGGCACAGCACCCGGAAATATAGGCACTTCCTTTTA TGGTGTGCGCCCTTGTGCCCCTTTACTTTTGGAGCACCCCCTCTCGCAAA CCTCACCGGCGAAAGCGGAAACAGATCGTTGCAAGAGGGTGCAGATGCGG CTCCCGCCCGACACGCTTGACCGACCCTTTGCAATCTCGTTGCTCACAGG CCGCTGCTTGGATGGCCCAGCCAACGCAAAGCGCTTGTTACTGTATCTTT CGACGAACTGTGCCGATCCTTGCAAGAACTATCGACCGGAGCGATCCGCG GCGTTTATTCAATATACCCACGAAGAAAAGCGCGGACGGACGGACTCGAG GCATCTCTTGTCGGTGGTTCTGGGTTACTATTTCCATTTCGACACATGCG AAAATAGCGTCCCGTTTCCTACAGGTCAGTCGACCATCCCTGGCTCCAGC AGCATGGAATTCGAGAGGGCTGCTGTTTCCGTCCATTACAAGGGTCGGTC GTCGGAAATCATGCTCAACTTGGCTGGAAATGTCGCCGATCGCGAGGTGG ATGCCTCGTCCTTGGCTCTCGACCTGCAGGCCGCTCTCAACCTCGCTTCG CCTCCGGTAGGCCTGCGCCTTCGCGTTGCTCCGGGCGCGGAGGCCGTAGT GTGTCCACTGAGCGTACTCATCGCCTGCCCGACGTACATCGCAACCACCT TCCAAGGAATGTCATGGTTCCCTTTACTGGGGGGGGAGGACGACGAAGGC GTAGCAGCCGGCAGTTCGCCGACATCACTGTCAACAAAGCCCCCTGAAGC CCCGACCGGAGACCCCTTCCTACCCCCGCCCCTGGGATCGCCGCTAGAAC ACGACCTGTCCTTCTTGGCGACCGGGTCCGCCGCGTCTCCCGCCGAGGGG TGTGGCCGTCCACTCACGGCACCCCCTGGCGACCGGTCACGAGGCGGATC GAAGCCGCGGCCTGGTCGGAGGGAAGGCCTCGGCAGGCCCACCTCCGCCA CACCAAGTGACAAGAGCTTCGGCGTGCGGCGACTCCGTCCGGCGAAGAGC GAGGGATACTTCGGGCGCCCCGTCACCACGGGCAATGCCAACAGCGGCAG CGCAAGCCCGGCATGGGGTCTGGGGAGCCCCCACGGGTTTCGGTGCGAGG AAACCGTCCCGCGCGACGTCACCATCGGCGCCCGCCGGCCGTCAACGGCT CCCGCGTTTGCTGCTCAAGGGTTGTGGCGGCAGTCGTCGTCGAACCTCCG CGGCTCCCGGTGTGAGTGGGGAGTGTACGGGGAGCGCTTCGGCCGAGGAG GGGACTTGCAAGAGGAAGAATTTGGTAACGGGACAAGCGAGGCCGCTGGG GCGCCACACCTGCCGCCGGATAATGGCACTGCGGGCGGTGGCGGCGGCAT CTCTTGCGCCAGCGGCTCTTGGACAGCAGAGCCGCCCAGTGAGTGTTGGG TGTGAGAATGTCATGGTTCCCTTTACTGGGGGGGGAGGACGACGAAGGCG TAGCAGCCGGCAGTTCGCCGACATCACTGTCAACAAAGCCCCCTGAAGCC CCGACCGGAGACCCCTTCCTACCCCCGCCCCTGGGATCGCCGCTAGAACA CGACCTGTCCTTCTTGGCGACCGGGTCCGCCGCGTCTCCCGCCGAGGGGT GTGGCCGTCCACTCACGGCACCCCCTGGCGACCGGTCACGAGGCGGATCG AAGCCGCGGCCTGGTCGGAGGGAAGGCCTCGGCAGGCCCACCTCCGCCAC ACCAAGTGACAAGAGCTTCGGCGTGCGGCGACTCCGTCCGGCGAAGAGCG AGGGATACTTCGGGCGCCCCGTCACCACGGGCAATGCCAACAGCGGCAGC GCAAGCCCGGCATGGGGTCTGGGGAGCCCCCACGGGTTTCGGTGCGAGGA AACCGTCCCGCGCGACGTCACCATCGGCGCCCGCCGGCCGTCAACGGCTC CCGCGTTTGCTGCTCAAGGGTTGTGGCGGCAGTCGTCGTCGAACCTCCGC GGCTCCCGGTGTGAGTGGGGAGTGTACGGGGAGCGCTTCGGCCGAGGAGG GGACTTGCAAGAGGAAGAATTTGGTAACGGGACAAGCGAGGCCGCTGGGG CGCCACACCTGCCGCCGGATAATGGCACTGCGGGCGGTGGCGGCGGCATC TCTTGCGCCAGCGGCTCTTGGACAGCAGAGCCGCCCAGTGAGTGTTGGGT GTGA back to top
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