prot_P-fluviatile_contig8.14414.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig8.14414.1
Unique Nameprot_P-fluviatile_contig8.14414.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length109
Homology
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BLAST of mRNA_P-fluviatile_contig8.14414.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.010e-43
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 0 
Query:    3 LLTPELRKTCVALWVEGDGNCFWRSCARVLWGTDLYWRQLKLVVLAWSSVNVGVLVGEGGLLF-RNGL-HYDDDVHCRHVYRGPDGKRDDDRDNYASMLQEQVAKF 106
            +LTPELRKT VALWVEGDGNCFWRS A+ LWGTD YWRQLKL VLAWS+VNV  LVGEGG LF R G+ HYDD++H +H+YRGPDGK D   D+ ASML E +AKF
Sbjct:   93 ILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKF 198
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE1.010e-4372.64SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003323OTU domainPROSITEPS50802OTUcoord: 12..109
score: 8.698

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1206065..1206391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14414.1mRNA_P-fluviatile_contig8.14414.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig8 1206045..1206391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig8.14414.1 ID=prot_P-fluviatile_contig8.14414.1|Name=mRNA_P-fluviatile_contig8.14414.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=109bp
MTLLTPELRKTCVALWVEGDGNCFWRSCARVLWGTDLYWRQLKLVVLAWS
SVNVGVLVGEGGLLFRNGLHYDDDVHCRHVYRGPDGKRDDDRDNYASMLQ
EQVAKFCQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom