mRNA_P-fluviatile_contig12.1376.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1376.1 vs. uniprot
Match: D8LDJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ1_ECTSI) HSP 1 Score: 221 bits (563), Expect = 9.250e-59 Identity = 177/403 (43.92%), Postives = 237/403 (58.81%), Query Frame = 1
Query: 7552 RFRHEAATAMQKNRRRLVERRAYLVLRWASVKVQSNRRRCYARRELAERKAAVWVLQVAGRNFVFNVSRKKAAHLLQDAYRLSIRIKRCRRERETISTAARFLQQAVRAWVARRIVQRKRAHQRRARAAAIVMRALWRHLCRRKEHRRMVAAELTLLNFMAAFSVKLSRRRQEREASAAFRIQAAFRR--SRFRARTSVLRNERXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRYEAAMGIQALFRGYKARAARTKRPAGVVKIQDFLPQRSQVAKSIS--PRELDRSILALQRLWRRSRRRANPNRVQDSPVVMGSIAELDERESSPMTPTSLESRASLTCSSVQEAIKALANGMSSRGVLTATDSNHLREALDLGGDDPVLQTALRQRLSGLQRALSRSSG 8748
R R EAAT +QK RRRL RRAY++LR ASVKV++N RR A+R +R+ AV +LQ A R FVFN R++AA+LLQ AYR S+R+K CR+ER+ I AA LQ++ RAWVARR+V ++R +R+ RAAA + A+WRHL RRK+HR+ VAA LTL FM SV LS R+ R+++AA RIQA R+ S + R + + + XXXXXXXXX R + A VKIQ FL Q+ + A+ S RE ++ L LQR WR R + QD P ++R SS T E ++ ++VQ A++ALA GM RGVL +++L + L LG DDPVL+ ALRQ LS L++AL+RS+G
Sbjct: 5 RCRREAATTLQKYRRRLALRRAYVLLRSASVKVEANYRRWRAQRNCFQRRLAVGILQEAARRFVFNTRRRRAANLLQSAYRSSVRVKHCRKERKKILDAANVLQRSARAWVARRVVGQRRKVRRQNRAAATLQYAMWRHLLRRKKHRQHVAAALTLWKFMGGLSVTLSAIRKRRKSAAATRIQAVARQYISLVKTRAILDMHRKEXXXXXXXXXACRGRRCRIHLSTLLLEQDECHXXXXXXXXXXXXXXRVKTIQHRACAVKIQIFLLQQRRKARFASRCEREREQGALVLQRAWR-WRIIGQDAKTQDEPTTTS-----EQRRSSLATSPRPEPLRAVDRANVQLAVEALAKGMRRRGVLDPIIADNLSDTLALGQDDPVLEVALRQGLSNLEQALARSTG 401
BLAST of mRNA_P-fluviatile_contig12.1376.1 vs. uniprot
Match: A0A6H5L2G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G6_9PHAE) HSP 1 Score: 208 bits (529), Expect = 2.830e-54 Identity = 171/410 (41.71%), Postives = 224/410 (54.63%), Query Frame = 1
Query: 7558 RHEAATAMQKNRRRLVERRAYLVLRWASVKVQSNRRRCYARRELAERKAAVWVLQVAGRNFVFNVSRKKAAHLLQDAYRLSIRIKRCRRERETISTAARFLQQAVRAWVARRIVQRKRAHQRRARAAAIVMRALWRHLCRRKEHRRMVAAELTLLNFMAAFSVKLSRRRQEREASAAFRIQAAFRRSRFRARTSVL----RNERXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRYEAAMGIQAL--------------FRGYKARAARTKRPAGVVKIQDFLPQRSQVAKSISPRELDRSILALQRLWRRSRRRANPNRVQDSPVVMGSIAELDERESSPMTPTSLESRASLTCSSVQEAIKALANGMSSRGVLTATDSNHLREALDLGGDDPVLQTALRQRLSGLQRAL 8733
R EAAT +QK RRRL RRAY++LR ASVKV +N RR +R+ +R+ AV +LQ A R FVFN R++AA+LLQ AYR S R+K R+ER+ I AA LQ++ RAWVARR+V +R QRR RAAA + A+WRHL RRK+HR+ VAA LTL FM SV LSR R+ R++ AA RIQA R+ +T + R ER GRRY + + + +R KR A +KIQ L R + A+ S RE + L LQR WRR + + QD P ++R SS T E +L ++VQ A+++LA GM RGVL + +L + L LG DDPVL+ ALRQ LS L++AL
Sbjct: 11 RREAATTLQKYRRRLTLRRAYVLLRSASVKVGANYRRWRTQRDCFQRRLAVGILQKASRRFVFNTRRRRAANLLQSAYRSSARVKHGRKERKKILDAANVLQRSARAWVARRVVGWRREVQRRNRAAAALQHAMWRHLWRRKKHRQHVAAALTLWKFMGGLSVTLSRIRKRRKSVAATRIQAVARQYISLVKTREILDMHRKERAAATRIQAACR----------------GRRYRKHLTTLQVEXXXXXXXXXXXXXXXXHISRVKTIKRRACALKIQTLLHPRRK-ARYTSRRE--QGALVLQRAWRR-KIIGQDAKTQDEPTTTS-----EQRRSSSATSPRPEPPRTLDRANVQLAVESLAKGMRRRGVLDPIIAENLSDTLALGQDDPVLEVALRQGLSNLEQAL 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1376.1 >prot_P-fluviatile_contig12.1376.1 ID=prot_P-fluviatile_contig12.1376.1|Name=mRNA_P-fluviatile_contig12.1376.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=2916bp MNDSPRSGAAGGSDEVNHPPFDLAASMLPLVPSLPPGGAEIRLSVRGIVIback to top mRNA from alignment at P-fluviatile_contig12:857756..875284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1376.1 ID=mRNA_P-fluviatile_contig12.1376.1|Name=mRNA_P-fluviatile_contig12.1376.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=17529bp|location=Sequence derived from alignment at P-fluviatile_contig12:857756..875284- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:857756..875284- >mRNA_P-fluviatile_contig12.1376.1 ID=mRNA_P-fluviatile_contig12.1376.1|Name=mRNA_P-fluviatile_contig12.1376.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=17496bp|location=Sequence derived from alignment at P-fluviatile_contig12:857756..875284- (Porterinema fluviatile SAG_2381)back to top |