mRNA_P-fluviatile_contig8.14299.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: D7G0J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J4_ECTSI) HSP 1 Score: 233 bits (594), Expect = 8.640e-65 Identity = 130/217 (59.91%), Postives = 150/217 (69.12%), Query Frame = 2
Query: 269 SASGVPRATSPTPEKQLATPRKSIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
+++G P + + P L T +KSID +RTK Y WPASLLREAC L KI G + KD KMA LE LD + ER+SPFL DLDDK GGTPASQP ASAKE E IPE L+ A AA+ +G SF KLL G+SYP AVLA I K E GGD IG RRKSKHC+PRFCE VA NL WFGHR QLSKAELD KL+ KTR AM+ +W++FKD
Sbjct: 89 ASAGAPVSATTLPA--LLTLQKSIDHNRTKCYHKWPASLLREACSLRKIMGFCREKDSGKMANRLEQLDVVMERNSPFLADLDDKVAGGTPASQPLASAKETEEIPEELMIATKAAVGMGASFKKRKLLAYNGRSYPAAAVLAAIEAAKDGE--GGDEDIGARRKSKHCVPRFCEVVAMNLELWFGHRRQLSKAELDNKLTSKTRSAMVRLWEQFKD 301
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K1S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S9_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.810e-47 Identity = 159/455 (34.95%), Postives = 209/455 (45.93%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKDATHRTTSAWWPLISTPTSSTSRTSRSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPGHALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRR-------RQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGV-AAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNE 1669
S++R+R KSY W A LLREAC L ++ G S+ KD KMA L LD + RSSP+L DL+DKATGGTP S+PPAS+ E + +P++LI AV AA+ G S + K+ GKSY V A++A I+E RA+ G G+G IG RRKSKHC+PRFCE + E FG R QLSK ELD K TR L +W+ FKD + ++ ++ K R D PD+ V D T R GH GA+ +R R++ G G Q + + +G LG+ A P SF+ T EGLE K E AKLR+EL++IK IR+EK LG +AD EDL++L VRA + E
Sbjct: 152 SLNRNRNKSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVSNG------------------------------------EMFSFCKERLDTYYFWLTAEKC---PDILAVCDQMLPD---GTARESTGVETAGDGHSGAQGASADASKRKVAKVESRERNVGVSGHQEKKKKQDAQIENTAKVA-----------------MSAVKGELGLDALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDWATTVRAQIRKE 545
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K787_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K787_9PHAE) HSP 1 Score: 176 bits (447), Expect = 6.840e-44 Identity = 166/485 (34.23%), Postives = 219/485 (45.15%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKDATHRTTSAW-----------------WPLISTPTSSTSRTS-------------RSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPGHALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRR-------RQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGV-AAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNE 1669
S++R+R KSY W A LLREAC L ++ G S+ K KMA L LD + RSSP+L DL+DKAT GTP S+PPAS+ E + +P+ LI AV AA+ G S + K+ GKSY V A++A I+E RA+ G G+G IG RRKS+HC+PRFCE + E FG R QLSK ELD K TR L +W+ FKD + ++ P IS +T RT +S S+GD + K D G PD+ V D T R GH GA+ +R R++ G G Q + + +G LG+ A P SF+ T EGLE K E AKLR+EL++IK IR+EK LG +AD EDL++L + VRA + E
Sbjct: 73 SLNRNRNKSYNKWSAYLLREACALRRLSGYSRSKYTDKMAAGLTQLDIVMSRSSPYLADLEDKATSGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSRHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVPRSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGD--------------MFSFCKESLDTYYF-GLTAEKC--PDILAVCDQMLPD---GTARESTGVETAGDGHSGAQGASADASKRKVAKVESRERNVGVSGHQKKKKKQDAQIENTAKVA-----------------MSAVKGELGLDALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDRATTVRAQIKKE 518
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JHA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA4_9PHAE) HSP 1 Score: 178 bits (452), Expect = 1.540e-43 Identity = 102/197 (51.78%), Postives = 129/197 (65.48%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
S++R+R KSY W A LLREAC L ++ G S+ KD KMA L LD + RSSP+L DL+DKATGGTP S+PPAS+ E + +P++LI AV AA+ G S + K+ GKSY V A++A I+E RA+ G G+G G RRKSKHC+PRFCE + E FG R QLSK ELD K TR L +W+ FKD
Sbjct: 278 SLNRNRDKSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEGT-GQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKD 472
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JY80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY80_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.220e-42 Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 2
Query: 533 GTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
GTPASQPPASAKE E IPE LI A +A+D+G SF+ KLLP G+SYP AVLA I E K AE G D IG RRKSKHC+PRFCE VA NL +WF HRTQLSKAEL KL+ KTRPAM+ +W++FKD
Sbjct: 4 GTPASQPPASAKESEKIPEELILATKSAVDMGASFEKRKLLPCNGRSYPAAAVLAAIEELKNAEGGVED--IGARRKSKHCVPRFCEMVAMNLDKWFRHRTQLSKAELHNKLTGKTRPAMVELWEEFKD 130
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JRL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL7_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.260e-41 Identity = 98/193 (50.78%), Postives = 124/193 (64.25%), Query Frame = 2
Query: 347 HRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
+R KSY W A LLREAC L ++ G S+ KD K+A L LD + RSSP+L DL+DKATGGTP S+PP S+ E + +P++LI AV AA+ G S + K+ GKSY V ++A I+E RA+ G G+G IG RRKSKHC+PRFCE + E FG R QLSK ELD K TR L +W+ FKD
Sbjct: 60 NRNKSYNKWSAYLLREACALRRLSGYSRSKDTDKIAAGLTQLDIVMSRSSPYLADLEDKATGGTPRSKPPESSAEAQRVPQNLITAVRAAIWSGLSPEPNKMYDCDGKSYAVATIMAAIKEDDRAD-GRGEG-IGQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKD 250
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5J889_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J889_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.970e-38 Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVA--QNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
S+ RHR +SY+ W A LL+EAC L KI G S+ D MA+ L LD + ER SP+ DL+D+ATGGT S+PPASA E + +P+ LI A+ AA++ G S K+ G KSY A++ ++E R IG RRKSKHC+PRFCE + Q + RTQLS+ ELD K + R L +W+ FKD
Sbjct: 194 SLKRHRGRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKD 390
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JWT0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT0_9PHAE) HSP 1 Score: 163 bits (412), Expect = 8.820e-38 Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVA--QNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
S+ RHR +SY+ W A LL+EAC L KI G S+ D MA+ L LD + ER SP+ DL+D+ATGGT S+PPASA E + +P+ LI A+ AA++ G S K+ G KSY A++ ++E R IG RRKSKHC+PRFCE + Q + RTQLS+ ELD K + R L +W+ FKD
Sbjct: 554 SLKRHRGRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKD 750
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5KSD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD9_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.450e-35 Identity = 142/360 (39.44%), Postives = 171/360 (47.50%), Query Frame = 2
Query: 623 LGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFG---HRTQLSKAELDKKLSR---KTRPAMLNVWDK-FKDATHRTTSAWWPLISTPTSSTSRT-SRSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPG--HALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRRRQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGVAAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNEV 1672
+G SF+ KLLP G SY AVLA I E K AE G D IG RRKSKHC+PRFCE VA NL +W H L + + + + ++ D + +TT WP +ST TS TSRT + T+ DE G S QEI PRRDVLLLQG H L+ K P G G+ GL P E GEG+R EG R TGSW GGLGVAAG Q V P SF+ TIEG ET KK E A+LRQ L DIK +R+EKALG+ D ED++I+E +LK VRAAL ++
Sbjct: 1 MGASFEKRKLLPCNGGSYLAAAVLAAIEELKNAEGGVED--IGARRKSKHCVPRFCELVAMNLDKWXDPPRHGRALGTVQGPQSVGEIHGQGNERSAHLEDACLCPSPSQTTIVCWPPVSTRTSCTSRTFDKFTTMKDEIIKDPGDMYVS--FQEIRTPRRDVLLLQGLDTYYHGLM---CEKYPGIEQTSIQVLPEGTESENTGVXXXXXXXXXXXXXXXXXXXXGRGKEGLDGEERHPWRAREEKKE-GEGDRXXXEGRRLSSNGETGSW-GGLGVAAGYAFQPQVFDAP-TSFYDTIEGCETRNKKLEYSARLRQTLADIKEDVRKEKALGDAVDLEDIQIMEAELKKVRAALKKDL 350
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K5L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L8_9PHAE) HSP 1 Score: 149 bits (375), Expect = 2.120e-35 Identity = 92/195 (47.18%), Postives = 115/195 (58.97%), Query Frame = 2
Query: 335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
S++R+R KSY W A LLREAC L + G S+ D KMA L LD + RSSP+L DL+DKATGGTP S+PPAS+ E + +P+ LI AV AA+ G S + K+ GKSY V A++A I+E RA+ G G+G IG RRKSKHC LSK ELD K TR L +W+ FKD
Sbjct: 62 SLNRNRNKSYNKWSAYLLREACALRTLTGNSRSNDTDKMAAGLTQLD-IMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSKHC---------------------LSKKELDAKQKGTTRDIHLEIWEAFKD 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14299.1 >prot_P-fluviatile_contig8.14299.1 ID=prot_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=265bp MARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIback to top mRNA from alignment at P-fluviatile_contig8:143591..147704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14299.1 ID=mRNA_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4114bp|location=Sequence derived from alignment at P-fluviatile_contig8:143591..147704- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:143591..147704- >mRNA_P-fluviatile_contig8.14299.1 ID=mRNA_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1590bp|location=Sequence derived from alignment at P-fluviatile_contig8:143591..147704- (Porterinema fluviatile SAG_2381)back to top |